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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100099g11.8534.mrna |
| Orig protein id | gnl|cribi|Naga_100099g11.8534 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:945456..947740 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3185 ID=rna3185|Name=rna3185|organism=Nannochloropsis gaditana|type=mRNA|length=2138bp
AGGCCTGGAAGCTTGGTAATACATAGGTAGGACGATTGGGGAGTGGCTTT
TGATGCGCTGAAGAAGCTACGTGTGAGGTGTTGAATGGGTACTGTTGCGG
GGGTAAATCCGCCGAAGCAGCCGAGCACGAAGCAGTCAGCCCATCTGACG
CTCGGAAGCTTGCTCCGGTGTGAATATCTTTGGCGCTGCTAGAATCGATA
GTATATTGAAAAGTGTGGTCTTTACCATTCCTATTCGGGTGCCCGTCCCC
GCTCTTTGTCTTTGCAACCAGACTGTCGCTACGGAGGTCCGCCAAGATGG
CCGTCACGTCGTGGTCACTGAGAGGGACCGGGGATTGAATGCGCAACGCC
GCCCGGCCTTGATGACGCACAGGATAGATTGACGCTTGAATGTGTGGATT
AAAAACAGGCGGCGATGGTGTATGCCTCCCTGTGCTGTGTGGATTGCAGT
CTCTCGATCGATTCTTGCCCGTGTCCATCTCTATCATGGCTAAAGCGGCT
TCAATGCGTGCCCGCTTTGAGGCTTCCTCTTGTACCGCGCGCGAATAAGG
ATCAGTGGGGCAACGGACAGCGCGTCCCGACTTAGAAAAAGAGAGCACTG
ATTCCCCCGCACCAAAATGGCAAGGCTTTCCCTTCAAGTTGTTCTGGTCG
TCGCCGTCTTCCCCATAGTCGCTCCCGTAATAGTATATTTCGTTTGCATC
TTCTCCATTGGAAGCTCGAAAATGGACTTCTTCATCGCTGGCAATCTGCA
TGCTGCTCTCTCCTCCAGTCGTCATTGCCTTTGCACTTTTCGCACGCTTT
GTAGGGTTACGACGCCGATGCCGCTTGGGAACTTCTGGGCCTCCGCCATG
ACCGCCCCTGTTGTTCTCGGCGGAAGCGTGGCCACGGCTTCGACTTCGTG
CCAACGTTGGATCCAGATGGTGAGCCAGAGCATAGGCAGAAGACATTCGA
ACATCCTTTTTGGGTCGCCCGCGCCCAGGCCGCTTATCCCACCACGCTTG
AAAACCCTGGATATAGCCGCGAGCCCGAGCAGGCAAGTACCTTTCGTGGT
ACGTTGCACAGATATTTTTCATGTATAAACGAACCTTTTCCGCATCAATG
CCCGGATACAGTGGAAGATTGAGCCGAAGAAACTGCTGATATCCCGAAGG
ATTTCCCTTATGGTCGTGGCCCCAGGCGATAAAGGCCTCGACGCACTTAC
TGGCCAACTCCTTCGGCATATTGTGCAGCCGCCGGTCTTCGTCCTGGGGC
CCAGAGCTGCTGTGACTGATTGTAGTGGATCCCAAACTGCTGGTGGAGCT
TGTTGTCAATGAAGAGAATGAAGCCGAGAGGCTGGGCGCATGAGCATGAA
GATTCGATGCTTTAATTTTCCCCCCGGGCCCCGTCTCTTTTTTTTGGGTA
TGGTTGCTCTCATCCCCATCCTCGGCAAATTTCTCTTCCGTGTAGCGGCT
ATAACGAACAACCTTAGCTTGTTGCTCTCCATGCTGCCTTGCGTCTTTTT
TGTGGACCTCTGTATTCATTCCCGTGGATGTAGTACTAGTGGTGCCGGCA
GATGTGGGACTTGGCAAGTTAATGCCCGAAGCGAAGATCGGAGGATGGCA
AGATGTGGCCGCTGCAGGCACATCAGCGACAGAGCGATAATAAGTGTTCA
TGACGGTTTGTAAGAGAGTCGGGCGTGATCAAGATTTCTATCCTACGTGG
CATGTATTAAAGCGCTAGTGAGTGCACAAGAATTGAGTAAAACGAGGCAT
TCACACGACTGCTGTGTTTGCCAGGCCTTATGAACTATCCATTATAGATC
TGGCTATATTGTCCCACGCTTTTTGTGAGTACTTCAACCCTATTATTTAA
AACAATGTCCTTGAAACAGTATCCGCCGTAGGCGCATTGTAGGCGAAAAA
AAACATGTAGCGAGGTTGATGGCGATGAGTAAATGCTTTTGAGCGCTCAG
CATATTTCCAAATTTCGGCCACTAGACCAAACTCGGGAGCCTGCTGGTAA
ATTAGTTAGAACAAAGGATATTACGGATGCCCCTGTGCATTGTAACACCT
GAGGATATGTAGGGGCTCGCTGACGCCCAACCAATGCCTAGACGAGGCCA
AAGCACATGGGCGACGGAACTTCATGTCCAAAATCACA back to topprotein sequence of rna3185 >rna3185-protein ID=rna3185-protein|Name=rna3185|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MPYITTSRRFSCNLFLGVLVALSLGWVHGNGPCTLPMNARRHGAGGCAAS
NVGNGANAGYPCPPCYFGVTATRATHTSPVLSFRQPKESLVRLKELGGKV
AGGVGQVVDKVRQKWDARQAHKKQNPPGGRGKVGRKQNKAQGNEGGCNVA
ALRVERGLFRHAPTGAGPLGDDEEEECAAGQDLHHLHEHHQGGKATGSGK
VSSPLNTAGVEEETGPALFVLGRTQSFDTALLREAEARSHHRRVPLSYGN
GLVDFVGFALKLLALLLFQVLGTALVVNDYQTTGLVSQTLIRFASLLAGL
AFVPPLVVALRESLPSHARNPLVRGLAHLFELALDVVVVAALSLLASVLL
TAVISLPSYNFLLSRELGEEYIKGALSAGFVMFFLYAFSKNFEPLASKWF
M back to topmRNA from alignment at CM002460.1:945456..947740+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3185 ID=rna3185|Name=rna3185|organism=Nannochloropsis gaditana|type=mRNA|length=2285bp|location=Sequence derived from alignment at CM002460.1:945456..947740+ (Nannochloropsis gaditana)
TGCCCGCTGCTTGCGGAAACGGCGGTCTCTTTTTCTGTGCACTCCGTGGC
TAATTCACTGCCTGCATCCCCGTACCGACTGTGTGTGCAGGTGTGCTTGC
GACCACCTTTTTCCATCGCcttggaaaaagagaagtTTTCATCCCAGGAC
GGGAAACCTCTCCGGCGCACTTTCCTCGCACTCAGAACAACTGCAACCCT
TTCAAAACATCAGTACTCGCCACGCTGTCACTTCTTGGAATCATGCCGTA
CATCACCACATCTCGTCGCTTTTCATGCAACTTGTTCCTTGGAGTCCTTG
TCGCGCTTAGCCTAGGCTGGGTTCATGGTAATGGTCCTTGCACTCTACCG
ATGAATGCCCGCCGACACGGTGCCGGTGGGTGTGCAGCATCCAATGTGGG
AAACGGGGCCAATGCGGGCTACCCGTGTCCACCGTGCTACTTCGGCGTAA
CGGCCACTCGGGCCACGCACACTTCTCCCGTCTTATCCTTCCGACAGCCC
AAGGAGAGTTTGGTGCGTTTGAAGGAGcttggagggaaagtggcGGGTGG
AGTCGGCCAGGTGGTAGACAAAGTGCGGCAGAAATGGGACGCGCGACAGG
CACACAAAAAGCAAAACCCgcccggtgggaggggaaaggtgggTCGGAAG
CAAAACAAGGCCcaaggaaacgaaggagggTGCAATGTGGCAGCTTTGCG
TGTGGAACGGGGGCTCTTTCGGCATGCTCCCACCGGGGCAGGGCCACTTG
gggacgacgaagaagaagagtgCGCGGCCGGACAAGACCTGCATCATTTG
CACGAGCACCATCAGGGCGGCAAGGCGACCGGCTCCGGGAAGGTTTCGTC
CCCTCTGAAcacggcgggcgtggaggaggagacggggccCGCCCTATTTG
TCCTGGGTAGGACCCAATCGTTTGACACGGCGCTCCTCCGAGAAGCAGAG
GCGCGCTCCCACCATCGTCGGGTCCCGCTTTCGTACGGAAACGGTTTGGT
GGATTTTGTCGGCTTTGCCCTCAAGCTCTTGGCCCTCCTCTTGTTCCAAG
TGCTCGGCACCGCCTTGGTCGTGAACGACTACCAGACCACAGGCTTGGTA
TCCCAGACGCTCATCCGATTCGCCTCCCTACTCGCGGGGCTGGCCTTCGT
GCCCCCGTTGGTGGTGGCCCTCCGGGAgtcgcttccctcccacgcgcgGA
ACCCCTTGGTGCGTGGCCTCGCCCATCTCTTCGAACTCGCCttggacgtg
gtggtggtcgccgccttgtccctcctggcctccgtcctcctgaCCGCCGT
tatctccttgccttcctacaacttcctcctctcgcggGAGCTGGGCGAGG
AATATATCAAGGGGGCCCTTTCGGCGGGCTTCGTCATGTTCTTTCTGTAC
GCCTTCAGCAAGAATTTCGAGCCACTGGCGAGCAAGTGGTTCATgtgaga
aggggaaaggggatatCGAGCATGTAGATAAACGGGGTGTGTCGAAAAGG
ATTGTGCAGAGCGGCAAGAGCGAGCCAGGCGTGTTTGCAGGGAGACAATG
TCTTTCACTGACGGGGTGGGACATTATGGAGTGGATGGGGGCGACCTGCC
GCCCGTGTGGTGGGACGAAGACGCGTGCATCCGCTTCAGCCGGGAGCTTG
CACCTAGAAGTGTGCAGAGGGGGGATGTTTGAGAGCAGAGCAGAGTGCCT
TGTCCATACCAGGTAAAGGGGAGGGgtcatggggagggggagggtgtcgG
AGGAAGTGAGAACGACCGAGTGATTGAACgcagggaagacgagggggaat
GAGGCTCGGGCGAGCCATGGGAATGTACGGAGGATCTGTATAGTGTCGAA
GATGTCAGAAAAGAATCCATGCGGGGTGCTtcaggaggagagccaggggg
ggatgggagcgaGACGGGCagaggggcgggtggagtGAGGCAATCGCCGA
GCAGCTGGACGGATAGGAGGGTTTTGCCATGGATTTGGGCATGTCTAGGT
GGGATAGGAAGAGACCCTGGTATGTCAGGGGGTGGGACGGCTTGTGTCCC
TTGCCGGACTCCTGTGGGCAAAGGCAAGCCAAAGCAACACTCCTCCGGGT
GGCTCTAGAATCTCAAGTCGTCATACATGTTGTTTCTTTGTCAAACTCCA
AATCTACTATCTTTGTGAGGCTCTCAGGACTCCATAACGTCCCTCTCTGC
TTCCCCTAGTCTCTCACCTGTCCTCGAGAGGCTCCCACCGACCCCTTCTC
AATCCTCCCCCGCGCGCCCCGGGCTGGTcaactcc back to topCoding sequence (CDS) from alignment at CM002460.1:945456..947740+ >rna3185 ID=rna3185|Name=rna3185|organism=Nannochloropsis gaditana|type=CDS|length=1206bp|location=Sequence derived from alignment at CM002460.1:945456..947740+ (Nannochloropsis gaditana)
ATGCCGTACATCACCACATCTCGTCGCTTTTCATGCAACTTGTTCCTTGG
AGTCCTTGTCGCGCTTAGCCTAGGCTGGGTTCATGGTAATGGTCCTTGCA
CTCTACCGATGAATGCCCGCCGACACGGTGCCGGTGGGTGTGCAGCATCC
AATGTGGGAAACGGGGCCAATGCGGGCTACCCGTGTCCACCGTGCTACTT
CGGCGTAACGGCCACTCGGGCCACGCACACTTCTCCCGTCTTATCCTTCC
GACAGCCCAAGGAGAGTTTGGTGCGTTTGAAGGAGcttggagggaaagtg
gcGGGTGGAGTCGGCCAGGTGGTAGACAAAGTGCGGCAGAAATGGGACGC
GCGACAGGCACACAAAAAGCAAAACCCgcccggtgggaggggaaaggtgg
gTCGGAAGCAAAACAAGGCCcaaggaaacgaaggagggTGCAATGTGGCA
GCTTTGCGTGTGGAACGGGGGCTCTTTCGGCATGCTCCCACCGGGGCAGG
GCCACTTGgggacgacgaagaagaagagtgCGCGGCCGGACAAGACCTGC
ATCATTTGCACGAGCACCATCAGGGCGGCAAGGCGACCGGCTCCGGGAAG
GTTTCGTCCCCTCTGAAcacggcgggcgtggaggaggagacggggccCGC
CCTATTTGTCCTGGGTAGGACCCAATCGTTTGACACGGCGCTCCTCCGAG
AAGCAGAGGCGCGCTCCCACCATCGTCGGGTCCCGCTTTCGTACGGAAAC
GGTTTGGTGGATTTTGTCGGCTTTGCCCTCAAGCTCTTGGCCCTCCTCTT
GTTCCAAGTGCTCGGCACCGCCTTGGTCGTGAACGACTACCAGACCACAG
GCTTGGTATCCCAGACGCTCATCCGATTCGCCTCCCTACTCGCGGGGCTG
GCCTTCGTGCCCCCGTTGGTGGTGGCCCTCCGGGAgtcgcttccctccca
cgcgcgGAACCCCTTGGTGCGTGGCCTCGCCCATCTCTTCGAACTCGCCt
tggacgtggtggtggtcgccgccttgtccctcctggcctccgtcctcctg
aCCGCCGTtatctccttgccttcctacaacttcctcctctcgcggGAGCT
GGGCGAGGAATATATCAAGGGGGCCCTTTCGGCGGGCTTCGTCATGTTCT
TTCTGTACGCCTTCAGCAAGAATTTCGAGCCACTGGCGAGCAAGTGGTTC
ATgtga back to top
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