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Properties
| Property Name | Value |
|---|
| Product | gdsl lipase acylhydrolase family protein |
| Orig transcript id | gnl|cribi|Naga_100099g8.8527.mrna |
| Orig protein id | gnl|cribi|Naga_100099g8.8527 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:935891..937571 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3182 ID=rna3182|Name=rna3182|organism=Nannochloropsis gaditana|type=mRNA|length=1944bp
ATGGCCCCTCACGCGGACCTCTTCCTGGCAGAGCTTTTTGGAGGCGTCGT
GAACAAAGCAAGGGAAGGAACGCTGGTCCAAATTCACCAGAGTGCCTTGG
CACGGGTGAGTGGCTTGCGCGAGGCAAAAATACACGATTTGGTTCATTTT
TCCCAGCCGGATGGGTCCTTTACGCAAGGGCTGGTAGTGGATCTGGAACA
AAACACGGTGGCTGTCGCCCTCTTGGACAAGACAATGCCCGTGGAAGGCG
CCCACGCGGTCTTGGCGGACACAGCGCTCAGCATGCCGGTGGGTCCGTCT
TTGCTGGGACGCGTCGTCGATCCTTTGGGGAGGCCGTTGCCTGATCTGGA
ACCCGCTATGGCCACAAAGCAAGTAGACTCCACAGAGTCTCCATCGGACC
GCACAAACACAAAGAGCTCCTCCTCTTCCTCCGCTTCCCTTCCTTCCACT
CCCATCATGAGCAGCCAGCGCCGGGCGCCCGGGATCATGGCGCGAAAACC
CCTGTGCCACCGGCTGCGCACAGGGGTCAAGGTTCTGGACGTCTTCCACC
CCCTCGGCCACGGCCAGAGCGTGGGACTCTTCGGAAGGCCCGGGAGCGGG
AAGTCAACGCTGGCCCTGCAGATCATCGCCAACCAGAACACGGCGGCGCC
TGTCCCTTCCCCGACCGCCCCACTGCACTGCGTCTATGTCGCCATTGGCC
AGGAGCCCCGGGCAGTCCAAGAGGCCGTGGGTGAACTCATCCGCCGTGCC
TGCTTTCAGCACGTTACAGTAGTCGCCGCCACACAGGACATGCCCCCCGG
GCTTCGGTTTCTGGCCCCCTTCGCGGGCTGTGCTCAGGGAGAGTATTGGC
GGGATCAGGGGGGACGAGTCCTGGTGGTCTGCGATGACCTGTCTAGGCAT
GCGGCGGCTTATTCGGAGATGGCCAAATTCATGCAGAAGCCTGAGGTGGA
GCATGGGCTGGCTCTGCACGGACCTTTGTTGGAGAGGTGCGCGCAGATGT
CTGATGCCAAGGGAGGAGGTGCGATGACGGGTTTGGTGGTGGTGGAGGGG
GAGGTGACAAGCGGGCAGGAGGGAGGGGTGGGGGGAGGGAAGGAGGACGG
GGGTCACGGCCTGGCGCATCGAATCAATTCCCTGGTCGACCATGCCATCA
CCTTGAACGTCGGCCTCGCGCAACGGCGGGTGTTTCCGGCCGTAGACGTG
ACGCAACAGATGAATTTGCCCTCCGCGGGCGCCGCCCTTCTCCCTGAACC
CGCTAAATGGTGCGTACAGCAACTGAGGATGATGTGGGCGGAGGCCCTGG
ACAAGGAGGCGGGCGCGAAGTTGGCAGAAAGATTGGGAATCCAGGCGGTG
GAGGAGGGGGAAGAAGGGAAGGTGGAGTGGCTGGAGTACCTGAAAAAGGT
CCGGATACTTTTTGAGCAACGCGCTCCCAGTGGGGAAGGGGCAGTCCTGT
GGACAGACGAGGCAGGGTTGGTGCTTTTGCTGATGTGCTGCTTGCAAAGA
CAGGTGCTGGGGCACCTGGACGCGGGGACTGTGAGGGCCTTGGAGCGGAT
CATGGCGGAGGAGCTGCCGAGGGCTGCGGGGTGGCGGAAGTTGAGGAGGG
AGGTCGAGGCCCTGACGCAGCATGCAGACGTGCGGACGGTGGCAGAAGCA
TTTGCAGAGGCACATATGACAGCTCAAAGGAGGGTGAAGGGGGTAGAGAG
GGAGGGGGACGGCGGAAGGGGGGAGTTCGGGCAAGGAGGCGTCACGTCAC
CTTCCATGGGGAAAGAGGGGCTGGCACTGAACGAGGAGGTGAATCGGGTG
TATAAGCGATGCTCGGATGTACTTGCTCATGCCATCAATTACGCGCAGAA
AAAGCAGCAGATTGCTAAGCTTACGAATTCCGCAGACGAGGCGGGGGATA
TTGCCAGAAGTCGCTCACAGACAAATGTGAGCCGTAGGAGATGA back to topprotein sequence of rna3182 >rna3182-protein ID=rna3182-protein|Name=rna3182|organism=Nannochloropsis gaditana|type=polypeptide|length=339bp
MASSMSSRSAIAVPPTSYISIRRSSLLLITLGSFALGTLIANMTSRSWRR
VQRYIDSRRSNGGRRPVIVCFGDSITQGGHSPEHVGWVGRLEDFYCRKAD
VLNRGFSGYNTDWLSRMLVDLFSRMFRRRPPVLVTIWLGANDATVESSRQ
HVPLWKYKENLEKMVRFFKGLGRRDRQVAILLVTPPPLHEGKWLAFLRSS
CPTSLLDRSFARTASYALAAREVGQAIKVPVVDIHSSFGVQIEEAVGGEG
MPQDETYASFLSDGLHLNEKGNRRAFEAVRDSIKHHFPWLDPINLETQAP
GWESLRSLYLDEAEGRGEKGEGGTVPLYSSKSSVIFNAY back to topmRNA from alignment at CM002460.1:935891..937571+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3182 ID=rna3182|Name=rna3182|organism=Nannochloropsis gaditana|type=mRNA|length=1681bp|location=Sequence derived from alignment at CM002460.1:935891..937571+ (Nannochloropsis gaditana)
AGGCCAGGCGCAGGCGCGCGGTTTCATGACAAATATAGCTGCCCCATATC
GACACAGTCTTATCTCTCGTTCCCCGCACGTAGAAATATTGGTCGTGGGC
AACAATATTCAACTCCTACACCTTTGAGTGGGAGTCTTTCTCAGTGGCTG
AGAACCACTTCTCACTTGAAGTTGGCTGATAATGGCAAGCAGCATGAGCA
GCAGAAGCGCCATTGctgtccctcccacgtcctaCATATCAATccgtcgc
tcctccctcttgcttaTTACTTTGGGCTCATTCGCATTGGGCACTCTTAT
TGCGAACATGACTTCCCGGTCCTGGCGGAGGGTACAACGCTACATAGACT
CCCGGCGTAGCAATGGAGGGCGCCGGCCAGTGATCGTTTGCTTTGGAGAC
AGTATCACACAGGGAGGGCACAGCCCCGAACACGTGGGGTGGGTGGGTCG
GTTGGAGGATTTTTATTGCCGGAAAGCGGACGTTTTAAATCGAGGTTTCA
GCGGGTACAACACAGACTGGTTGTCTCGGATGTTGGTGGACCTCTTTTCC
CGTATGTTCAGACGGAGACCACCTGTATTGGTGACGATTTGGCTTGGTGC
CAACGATGCTACGGTAGAAAGCTCACGGCAGCACGTGCCCCTGTGGAAAT
ACAAGGAAAATTTGGAGAAAATGGTCCGGTTTTTCAAGGGCTTGGGTCGG
CGTGATCGTCAAGTACGTCGGGCGGAAtccgggacggagggagcgacgag
gCCTGACTCACGGTGCTTGCGTGTATCCAACGACTATGTCCCTAATATAT
TAGGCGCAGACTCCTTTTCCATGGAGGCCAACGTCTGTGTTTGTACCACT
CCCTACTGATCTCGAACcccctcttgctcttccctACCAGGtggccatcc
tcctcgtcactcccccccctttgcaCGAAGGGAAATGGCTTGCATTCCTC
CGCTCGTCGTgcccaacctccctcctcgaccggtCCTTCGCGCGCACTGC
TTCCTACGCCCTGGCAGCTCGAGAGGTGGGGCAGGCCATAAAAGTCCCGG
TAGTGGACATACACTCCTCGTTTGGGGTCcagatcgaggaggcggtggga
ggggagggaatgccCCAAGACGAGACATACGCCAGCTTTCTCTCAGACGG
CTTGCACCTGAATGAGAAGGGGAACAGAAGGGCCTTTGAAGCGGTGAGAG
ACAGTATCAAGCACCATTTCCCCTGGCTGGATCCCATCAATCTGGAGACG
CAGGCCCCGGGGTGGGAGAGCTTACGGTCGCTGTACTTGGACGAAgccga
gggcaggggggagaaaggggagggcggtacCGTGCCTTTGTACAGTAGTA
AGAGCAGCGTGATTTTCAATGCGTACTAGGCGTGCTGGAGAGAAAGTAAC
GGGACAAAGGTCAGAGACGGCAGGGCACCCACGACGTTCAAGCTGGTGAG
CTCGACTCATGAGCAGTCCTAGGGATCGGGGTATCGTGATCCCTCAATAA
ATAAATTTAACACATTTTTGGCGCTGTGTGCACCAGCGTTGGGTTAAGAT
GACCTTTTGCAGCGCACTTTGTGGTATGGTTCTTTGAAAGCTGCAAGCCT
GGCGCTCGAccatctcctcgccttcctttctcgccttctctctgcTTTAC
GCCCCTCGCTTTATCCCGGGGCGGCCACCCC back to topCoding sequence (CDS) from alignment at CM002460.1:935891..937571+ >rna3182 ID=rna3182|Name=rna3182|organism=Nannochloropsis gaditana|type=CDS|length=2040bp|location=Sequence derived from alignment at CM002460.1:935891..937571+ (Nannochloropsis gaditana)
ATGGCAAGCAGCATGAGCAGCAGAAGCGCCATTGctgtccctcccacgtc
ctaCATATCAATccgtcgctcctccctcttgcttaTTACTTTGGGCTCAT
TCGCATTGGGCACTCTTATTGCGAACATGACTTCCCGGTCCTGGCGGAGG
GTACAACGCTACATAGACTCCCGGCGTAGCAATGGAGGGCGCCGGCCAGT
GATCGTTTGCTTTGGAGACAGTATCACACAGGGAGGGCACAGCCCCGAAC
ACGTGGGGTGGGTGGGTCGGTTGGAGGATTTTTATTGCCGGAAAGCGGAC
GTTTTAAATCGAGGTTTCAGCGGGTACAACACAGACTGGTTGTCTCGGAT
GTTGGTGGACCTCTTTTCCCGTATGTTCAGACGGAGACCACCTGTATTGG
TGACGATTTGGCTTGGTGCCAACGATGCTACGGTAGAAAGCTCACGGCAG
CACGTGCCCCTGTGGAAATACAAGGAAAATTTGGAGAAAATGGTCCGGTT
TTTCAAGGGCTTGGGTCGGCGTGATCGTCAAGtggccatcctcctcgtca
ctcccccccctttgcaCGAAGGGAAATGGCTTGCATTCCTCCGCTCGTCG
TgcccaacctccctcctcgaccggtCCTTCGCGCGCACTGCTTCCTACGC
CCTGGCAGCTCGAGAGGTGGGGCAGGCCATAAAAGTCCCGGTAGTGGACA
TACACTCCTCGTTTGGGGTCcagatcgaggaggcggtgggaggggaggga
atgccCCAAGACGAGACATACGCCAGCTTTCTCTCAGACGGCTTGCACCT
GAATGAGAAGGGGAACAGAAGGGCCTTTGAAGCGGTGAGAGACAGTATCA
AGCACCATTTCCCCTGGCTGGATCCCATCAATCTGGAGACGCAGGCCCCG
GGGTGGGAGAGCTTACGGTCGCTGTACTTGGACGAAgccgagggcagggg
ggagaaaggggagggcggtacCGTGCCTTTGTACAGTAGTAAGAGCAGCG
TGATTTTCAATGCGTACTAGATGGCAAGCAGCATGAGCAGCAGAAGCGCC
ATTGctgtccctcccacgtcctaCATATCAATccgtcgctcctccctctt
gcttaTTACTTTGGGCTCATTCGCATTGGGCACTCTTATTGCGAACATGA
CTTCCCGGTCCTGGCGGAGGGTACAACGCTACATAGACTCCCGGCGTAGC
AATGGAGGGCGCCGGCCAGTGATCGTTTGCTTTGGAGACAGTATCACACA
GGGAGGGCACAGCCCCGAACACGTGGGGTGGGTGGGTCGGTTGGAGGATT
TTTATTGCCGGAAAGCGGACGTTTTAAATCGAGGTTTCAGCGGGTACAAC
ACAGACTGGTTGTCTCGGATGTTGGTGGACCTCTTTTCCCGTATGTTCAG
ACGGAGACCACCTGTATTGGTGACGATTTGGCTTGGTGCCAACGATGCTA
CGGTAGAAAGCTCACGGCAGCACGTGCCCCTGTGGAAATACAAGGAAAAT
TTGGAGAAAATGGTCCGGTTTTTCAAGGGCTTGGGTCGGCGTGATCGTCA
AGtggccatcctcctcgtcactcccccccctttgcaCGAAGGGAAATGGC
TTGCATTCCTCCGCTCGTCGTgcccaacctccctcctcgaccggtCCTTC
GCGCGCACTGCTTCCTACGCCCTGGCAGCTCGAGAGGTGGGGCAGGCCAT
AAAAGTCCCGGTAGTGGACATACACTCCTCGTTTGGGGTCcagatcgagg
aggcggtgggaggggagggaatgccCCAAGACGAGACATACGCCAGCTTT
CTCTCAGACGGCTTGCACCTGAATGAGAAGGGGAACAGAAGGGCCTTTGA
AGCGGTGAGAGACAGTATCAAGCACCATTTCCCCTGGCTGGATCCCATCA
ATCTGGAGACGCAGGCCCCGGGGTGGGAGAGCTTACGGTCGCTGTACTTG
GACGAAgccgagggcaggggggagaaaggggagggcggtacCGTGCCTTT
GTACAGTAGTAAGAGCAGCGTGATTTTCAATGCGTACTAG back to top
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