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Properties
| Property Name | Value |
|---|
| Product | otu domain-containing protein 7b |
| Orig transcript id | gnl|cribi|Naga_100101g4.9064.mrna |
| Orig protein id | gnl|cribi|Naga_100101g4.9064 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:904501..907387 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3169 ID=rna3169|Name=rna3169|organism=Nannochloropsis gaditana|type=mRNA|length=1957bp
GGCAGTGGTGTGCTTGTTAGGTACGTGCAGCGTGATTTTAGCATGGATTG
TTTTGAATCATGGGTTTCGTTTACTTTTTTTACCTAACATTGCAGAGGAC
GCGGCGCTTTTTGGAAACTACCTCCCCTGTCACATTGTTGCGTACACCAA
GCATGACGAGTGAGGCTTTGCCCCCCCCGGCCTCCGAACTTCATGTCACG
AAAAAGGCAAAAAAGCTACCAACACTACCAGGGTCCATGGTCGTCCAATT
TCAGGACGCAACTGGAAAGCAAACGGGGCCTCGCATTGACTTACCTACCG
ATTCGACGCCGGCACAGCTTGAGCTTTTGATCAATGAGCTCCGGAAAGCT
ACCGACCCCACGGAAGAGTCCCAAGGAAAGGTTCCATACTCATGCTATAT
CAACGACGTGGAGGTCTTGGACAGCTTGCGGGATACATTGGAAAGCCAAG
GAATCGTTAACGGAGAAGCCGTCATCAACATCAACTACCAGCCCTTAGCC
GTCTTTCGAGTGCGCCCCGTTGTCCGTTGCACCGACACCATGCCCGGGCA
TACAGAGGCCGTCATACACGTGTCCTTTTCACCCGATGGTCGACGACTGG
CCAGCGGCGGCGGCGACACCACGGTCCGCTTCTGGGACACCGGGACCAGC
CTACCCAAGTTCACGTGCCGGGGACACCGACACCACGTCCTGTGCACGGC
CTGGTCCCCCGATGGCTCGCGTTTTGCCTCGGCAGACAAGGCGGGAGAGA
TTCGTCTGTGGGACCCGGCGACGGGCCTGGCGGTGGGACAGCCGTTGCAG
GGGCATAAACAGCACATCACGTCCTTGGCGTGGGAGCCTTTGCATTTGAA
CCGGGGGAAAGGCGAGCGTCTGGCCTCCTCCAGCAAGGACGGAACGGTGC
GCGTTTGGAACGTGCGGACGGGGGCATGCCTGACCACGCTGGCGCAACAC
ACCAATTCGGTGGAGTGCTGCAAGTGGGGCGGCCAGGGTGTGCTCTACAC
AGGGTCACGCGACCGGACTGTCAAAATCTGGGCGCTCCAAGGACGGGACG
GTGAGGCAGGCTTTGGGAAGCTGGTCAAGACCCTGGTGGGGCACGGGCAT
CGGATCAACACGCTGGCGCTGAACACCGACTACGTGCTGCGGACGGGCCC
CTTCGACCACACGGGGAGCTTGGCCCTGGACGCGGCCTCCCCGATGGAGG
CCGCTGAAGCCAAGTACCGGAAGTTTCTTGAAGGCTCGGAGGGGAGGGAG
CGGCTGGTCTCTGGCTCCGACGACTTTACCTTGTTTTTGTGGGACCCTCT
GGGAGAGGAGGGGGGGAAAAAGCCCCTGGCCCGGATGACAGGGCACCAGC
AGGCCGTGAACCACATCTCCTTCTCCCCGGATGGGCGGTATGTGGCCAGC
GCCTCCTTCGACAAGAAGGTCAAGACCTGGGACGGACGGACGGGACGCTT
CCTCTCCACGCTGGTGGGCCACGTGGGCGCCGTGTACATGGTGGCTTGGT
CCCCCGACAGCCGTTTGTTGGTGAGTGCCAGCAAGGACAGCACCTTGAAG
CTGTGGGACGTGGCCAAGGGCGCCAAGGCGAAGGAGACGCTCCCGGGGCA
CATGGACGAGGTTTATGCCCTTGACTGGGCACCCAACGGTGCGAGCGTGG
CCTCGGGGAGCAAGGACCGGACCATCAAAATATGGCGGGCGTAAGAGGGG
TCATGGGGGGCGGGAGGGTTCGTAATGGGGAGAGGGAGGCAGTCCGCCCA
CGGGGCCGGACAGGAAGGCTTGTATTTCAGGAGGGGTCCCTGGTCTCTCG
TGACGGAGGGATCAAAGTACATGTACGGATAGAAAGATATGGGCCCGGTC
AAATGTTCCTGTGTCGGCAATGTATGGTGCCTGACCTCTAGGGCTGGCAT
TCGGGCCAACTGCCAACTAATCTACACCCGCACAAAATTAACACAATTTT
GCAAAGT back to topprotein sequence of rna3169 >rna3169-protein ID=rna3169-protein|Name=rna3169|organism=Nannochloropsis gaditana|type=polypeptide|length=772bp
MQIKEKAYTSQRKFYHLIRTQLDPNYVTQSIIMPRTIGVHSHLSMGRLFA
VSAVNVWLGPPKKTEYETDATSSTSTSISSSSPPSPAGGPTSLPPPPAPL
HAAPRRLHRTLSFRGGDDVTEALHMELEHSLLEVVEVPAKEVEQEPKLDE
GDGHSLTPSTSFSCNHFALAKPSTPIHLPEVANEDLHRSLTSLNCAQGPY
VLGDGVCHTTFSLLPLLRELPRQSRKSLLNDVIDLSPTRNLERAGRINWH
AGCAMLVALRTESDGNCLAHAAALGCWGVHDRKLLLRSAIRSFLINDPAS
KEGRVHPVMARGTGGKRLVRLIRKSWEEELGKYGVQLEKGALDSEWAVLA
KQAENSTMENGLTSAGSLCQGRDLKDHDSFAYLEAAHIYVLAHVLRRPII
VLATDWVDAKGRQLALAEEIAGVYLPLELPRQNCSRMPLVLAYDNFHFSP
LLPVDPSLPSYLPLVTSSARPDELLPMPFYVPGERNKHLRAAVLKHYLAC
TVLADGVLAASIQHPEAPKEPRMSPFSAASFPADGLLSLLLSNIIEEEEF
QLGKMRERGGAFPRKISAAVQSRRRSDSSPPRPLSLSSLPVLSARENSGK
QQHQEAGQGLPQGRKDLRGQQREQRHLQNKAQERKVQNQGTTRQEKQQHQ
RKQNQEICKSSSCSSLGRRATSLGDSSVPVKNYGNGDQDSCNDRLVKDQP
TFTQQLYENKELVMALKLYWQSKQEDRQSRRQVRSSSSTMTSTAPSPPKT
VSTPPAVQPVDATAIRLPLPSG back to topmRNA from alignment at CM002460.1:904501..907387+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3169 ID=rna3169|Name=rna3169|organism=Nannochloropsis gaditana|type=mRNA|length=2887bp|location=Sequence derived from alignment at CM002460.1:904501..907387+ (Nannochloropsis gaditana)
TCCAAGTCGAAGGCCCATCCCCTGGGTGCAACACACACCAAGGCACGTGC
ATTTTTCAGCCACGTCGAGACGCGATGGCGTATCTTACTTGTAGGGGAAG
TTTGCGACGAAATCCATCTTCGAGCCCCAAATTACCAAAGAAGCCGAGGT
ATCGGGGAAAATTCCGATGCAGATAAAGGAGAAGGCATACACTTCGCAAA
GGAAATTCTATCATTTGATACGGACACAACTTGACCCAAATTACGTGACT
CAATCAATTATTATGCCACGAACTATAGGGGTACATTCTCATCTTTCGAT
GGGAAGGCTCTTTGCTGTTTCAGCGGTCAATGTGTGGTTAGGTAAGACAT
TCGTCCCACCGACGGCTTTCCCTTTCGCTTCGGTGCTTTCCTTCGTGGCT
GACACAATGTATCTTACCTCACGTCTAACAAAACAGGCCCTCCCAAGAAA
ACTGAGTACGAGACGGATGCGACGTCGAGCACAAGCACTTCTATTTCATC
gtcgtctcctccgtcccctgcTGGTGGACCGACGTCCCTACCGCCGCCCC
CGGCGCCCCTCCATGCCGCGCCACGCCGACTACACCGCACCCTGTCCTTC
CGGGGAGGCGATGATGTGACGGAGGCTTTACATATGGAGCTCGAGCATTC
ATTATTAGAAGTGGTGGAGGTACCCGCGAAGGAAGTAGAGCAGGAGCCGA
AACTGGATGAAGGTGACGGACACTCCCTTACCCCCAGCACTAGCTTTTCT
TGCAACCACTTTGCGCTGGCGAAGCCATCCACACCAATTCATTTACCGGA
AGTCGCGAATGAGGACCTACACAGATCATTGACATCGTTAAACTGTGCGC
AAGGTCCCTATGTGCTTGGTGACGGCGTTTGCCATACGAccttcagcctc
ctcccactcttgCGGGAACTGCCCCGCCAAAGCCGCAAGTCTCTCTTGAA
CGATGTCATTGATCTCAGCCCCACACGAAACCTCGAACGAGCCGGGAGGA
TAAACTGGCACGCGGGATGCGCCATGTTGGTGGCACTGCGCACCGAAAGT
GACGGCAACTGTCTGGCGCATGCGGCCGCTTTGGGTTGTTGGGGAGTGCA
CGATCGAAAGCTCTTGCTGCGAAGCGCGATCCGATCCTTCCTTATCAACG
ACCCGGCCTCAAAAGAAGGCAGGGTCCATCCCGTGATGGCGCGTGGGACA
GGCGGGAAACGCCTGGTGCGTCTGATTCGCAagtcgtgggaggaggaact
ggGGAAGTACGGGGTGCAactggagaagggggcgttGGACTCCGAGTGGG
CAGTCCTGGCCAAGCAAGCCGAGAATTCAACCATGGAAAATGGGCTGACC
TCAGCAGGAAGCCTCTGCCAAGGGCGGGACTTAAAGGACCACGACAGCTT
CGCCTACCTGGAAGCTGCTCATATCTACGTCCTAGCGCATGTCCTTCGCC
GCCCGATTATAGTTCTAGCCACAGACTGGGTGGACGCCAAGGGTCGCCAG
CTCGCTCTGGCAGAGGAAATCGCTGGGGTATATTTGCCGTTGGAGCTACC
TCGACAGAACTGTAGCCGGATGCCCCTGGTCTTAGCCTACGACAACTTCC
ATTTCagtcccctcctgcccgtggacccctccctgccctcctaCCTGCCG
CTAGTGACGAGCAGCGCACGCCCTGACGAGCTCTTACCGATGCCTTTCTA
CGTGCCGGGAGAGCGGAACAAACATTTGCGTGCGGCAGTGTTGAAGCACT
ACCTCGCCTGCACCGTGCTCGCGGACGGGGTCCTTGCGGCCAGCATCCAG
CACCCCGAGGCCCCGAAGGAGCCACGCATGTCCCCTTTttctgccgcctc
cttccccgcggaCGGACTGCTCTCTTTGCTCCTGAGCAATATcatagaag
aggaggagtttCAGCTCGGAAAGATGCGGGAGCGCGGTGGCGCTTTTCCC
AGGAAAATCAGCGCCGCGGTGCAATCACGGAGGCGGTctgactcctcccc
tccccgtcctctgtcACTTTCTTCACTTCCTGTACTGAGTGCGCGGGAAA
ATAGTGGAAAACAGCAACATCAGGAAGCCGGGCAGGGTCTGCCGCAGGGA
CGGAAAGACCTGCGAGGACAGCAGCGAGAGCAACGACATCTGCAAAACAA
AGCGCAAGAGAGAAAAGTACAAAATCAAGGGACCACAAGGCAAgaaaagc
agcagcaccaacGGAAGCAAAATCAGGAAATATGCAAATCATCATCTTGT
TCGTCGTTGGGGCGTCGCGCTACCAGCCTGGGGGACAGCAGCGTTCCTGT
CAAAAATTATGGGAATGGGGACCAAGATTCCTGCAACGATCGTCTTGTGA
AGGACCAACCTACCTTCACCCAGCAGCTTTATGAGAACAAAGAACTCGTG
ATGGCTCTTAAACTGTACTGGCAAAGCAAGCAAGAGGACAGGCAGTCGCG
TCGGCAGGTACGATCGTCCTCGAGTACTATGACCTCGACGGCACCATCGC
CGCCCAAGACTGTTAGCACTCCACCAGCTGTACAACCGGTAGACGCGACC
GCAATTCGATTGCCGTTGCCATCAGGGTAGGGACATAAACAGGGATTCAC
ACATTCATTGGGGTGGGTTACAGGCTTTATTTGATGGGAGCAGTCAGTAC
ACCGGGGTGTTGGTTCCATGGATAGCCAAAAAAATGATTGCGGGGGTATA
GCGTGAAGACCAGACGTGTGTTGTATAGTGTGTAAAGGCTGCAGCGTGCT
TACATAGCATAGTCGTGTTACAAAGATAGGGAAATGCGGAAAGCGCGAAC
AAAAACGGAGGGGAATCGGGCTTGTAAATCCAGTGGGTGGATTGAGCAAA
GTCACTGCCCCATCGGTAAATACATTACGTCTATAAG back to topCoding sequence (CDS) from alignment at CM002460.1:904501..907387+ >rna3169 ID=rna3169|Name=rna3169|organism=Nannochloropsis gaditana|type=CDS|length=4638bp|location=Sequence derived from alignment at CM002460.1:904501..907387+ (Nannochloropsis gaditana)
ATGCAGATAAAGGAGAAGGCATACACTTCGCAAAGGAAATTCTATCATTT
GATACGGACACAACTTGACCCAAATTACGTGACTCAATCAATTATTATGC
CACGAACTATAGGGGTACATTCTCATCTTTCGATGGGAAGGCTCTTTGCT
GTTTCAGCGGTCAATGTGTGGTTAGGCCCTCCCAAGAAAACTGAGTACGA
GACGGATGCGACGTCGAGCACAAGCACTTCTATTTCATCgtcgtctcctc
cgtcccctgcTGGTGGACCGACGTCCCTACCGCCGCCCCCGGCGCCCCTC
CATGCCGCGCCACGCCGACTACACCGCACCCTGTCCTTCCGGGGAGGCGA
TGATGTGACGGAGGCTTTACATATGGAGCTCGAGCATTCATTATTAGAAG
TGGTGGAGGTACCCGCGAAGGAAGTAGAGCAGGAGCCGAAACTGGATGAA
GGTGACGGACACTCCCTTACCCCCAGCACTAGCTTTTCTTGCAACCACTT
TGCGCTGGCGAAGCCATCCACACCAATTCATTTACCGGAAGTCGCGAATG
AGGACCTACACAGATCATTGACATCGTTAAACTGTGCGCAAGGTCCCTAT
GTGCTTGGTGACGGCGTTTGCCATACGAccttcagcctcctcccactctt
gCGGGAACTGCCCCGCCAAAGCCGCAAGTCTCTCTTGAACGATGTCATTG
ATCTCAGCCCCACACGAAACCTCGAACGAGCCGGGAGGATAAACTGGCAC
GCGGGATGCGCCATGTTGGTGGCACTGCGCACCGAAAGTGACGGCAACTG
TCTGGCGCATGCGGCCGCTTTGGGTTGTTGGGGAGTGCACGATCGAAAGC
TCTTGCTGCGAAGCGCGATCCGATCCTTCCTTATCAACGACCCGGCCTCA
AAAGAAGGCAGGGTCCATCCCGTGATGGCGCGTGGGACAGGCGGGAAACG
CCTGGTGCGTCTGATTCGCAagtcgtgggaggaggaactggGGAAGTACG
GGGTGCAactggagaagggggcgttGGACTCCGAGTGGGCAGTCCTGGCC
AAGCAAGCCGAGAATTCAACCATGGAAAATGGGCTGACCTCAGCAGGAAG
CCTCTGCCAAGGGCGGGACTTAAAGGACCACGACAGCTTCGCCTACCTGG
AAGCTGCTCATATCTACGTCCTAGCGCATGTCCTTCGCCGCCCGATTATA
GTTCTAGCCACAGACTGGGTGGACGCCAAGGGTCGCCAGCTCGCTCTGGC
AGAGGAAATCGCTGGGGTATATTTGCCGTTGGAGCTACCTCGACAGAACT
GTAGCCGGATGCCCCTGGTCTTAGCCTACGACAACTTCCATTTCagtccc
ctcctgcccgtggacccctccctgccctcctaCCTGCCGCTAGTGACGAG
CAGCGCACGCCCTGACGAGCTCTTACCGATGCCTTTCTACGTGCCGGGAG
AGCGGAACAAACATTTGCGTGCGGCAGTGTTGAAGCACTACCTCGCCTGC
ACCGTGCTCGCGGACGGGGTCCTTGCGGCCAGCATCCAGCACCCCGAGGC
CCCGAAGGAGCCACGCATGTCCCCTTTttctgccgcctccttccccgcgg
aCGGACTGCTCTCTTTGCTCCTGAGCAATATcatagaagaggaggagttt
CAGCTCGGAAAGATGCGGGAGCGCGGTGGCGCTTTTCCCAGGAAAATCAG
CGCCGCGGTGCAATCACGGAGGCGGTctgactcctcccctccccgtcctc
tgtcACTTTCTTCACTTCCTGTACTGAGTGCGCGGGAAAATAGTGGAAAA
CAGCAACATCAGGAAGCCGGGCAGGGTCTGCCGCAGGGACGGAAAGACCT
GCGAGGACAGCAGCGAGAGCAACGACATCTGCAAAACAAAGCGCAAGAGA
GAAAAGTACAAAATCAAGGGACCACAAGGCAAgaaaagcagcagcaccaa
cGGAAGCAAAATCAGGAAATATGCAAATCATCATCTTGTTCGTCGTTGGG
GCGTCGCGCTACCAGCCTGGGGGACAGCAGCGTTCCTGTCAAAAATTATG
GGAATGGGGACCAAGATTCCTGCAACGATCGTCTTGTGAAGGACCAACCT
ACCTTCACCCAGCAGCTTTATGAGAACAAAGAACTCGTGATGGCTCTTAA
ACTGTACTGGCAAAGCAAGCAAGAGGACAGGCAGTCGCGTCGGCAGGTAC
GATCGTCCTCGAGTACTATGACCTCGACGGCACCATCGCCGCCCAAGACT
GTTAGCACTCCACCAGCTGTACAACCGGTAGACGCGACCGCAATTCGATT
GCCGTTGCCATCAGGGTAGATGCAGATAAAGGAGAAGGCATACACTTCGC
AAAGGAAATTCTATCATTTGATACGGACACAACTTGACCCAAATTACGTG
ACTCAATCAATTATTATGCCACGAACTATAGGGGTACATTCTCATCTTTC
GATGGGAAGGCTCTTTGCTGTTTCAGCGGTCAATGTGTGGTTAGGCCCTC
CCAAGAAAACTGAGTACGAGACGGATGCGACGTCGAGCACAAGCACTTCT
ATTTCATCgtcgtctcctccgtcccctgcTGGTGGACCGACGTCCCTACC
GCCGCCCCCGGCGCCCCTCCATGCCGCGCCACGCCGACTACACCGCACCC
TGTCCTTCCGGGGAGGCGATGATGTGACGGAGGCTTTACATATGGAGCTC
GAGCATTCATTATTAGAAGTGGTGGAGGTACCCGCGAAGGAAGTAGAGCA
GGAGCCGAAACTGGATGAAGGTGACGGACACTCCCTTACCCCCAGCACTA
GCTTTTCTTGCAACCACTTTGCGCTGGCGAAGCCATCCACACCAATTCAT
TTACCGGAAGTCGCGAATGAGGACCTACACAGATCATTGACATCGTTAAA
CTGTGCGCAAGGTCCCTATGTGCTTGGTGACGGCGTTTGCCATACGAcct
tcagcctcctcccactcttgCGGGAACTGCCCCGCCAAAGCCGCAAGTCT
CTCTTGAACGATGTCATTGATCTCAGCCCCACACGAAACCTCGAACGAGC
CGGGAGGATAAACTGGCACGCGGGATGCGCCATGTTGGTGGCACTGCGCA
CCGAAAGTGACGGCAACTGTCTGGCGCATGCGGCCGCTTTGGGTTGTTGG
GGAGTGCACGATCGAAAGCTCTTGCTGCGAAGCGCGATCCGATCCTTCCT
TATCAACGACCCGGCCTCAAAAGAAGGCAGGGTCCATCCCGTGATGGCGC
GTGGGACAGGCGGGAAACGCCTGGTGCGTCTGATTCGCAagtcgtgggag
gaggaactggGGAAGTACGGGGTGCAactggagaagggggcgttGGACTC
CGAGTGGGCAGTCCTGGCCAAGCAAGCCGAGAATTCAACCATGGAAAATG
GGCTGACCTCAGCAGGAAGCCTCTGCCAAGGGCGGGACTTAAAGGACCAC
GACAGCTTCGCCTACCTGGAAGCTGCTCATATCTACGTCCTAGCGCATGT
CCTTCGCCGCCCGATTATAGTTCTAGCCACAGACTGGGTGGACGCCAAGG
GTCGCCAGCTCGCTCTGGCAGAGGAAATCGCTGGGGTATATTTGCCGTTG
GAGCTACCTCGACAGAACTGTAGCCGGATGCCCCTGGTCTTAGCCTACGA
CAACTTCCATTTCagtcccctcctgcccgtggacccctccctgccctcct
aCCTGCCGCTAGTGACGAGCAGCGCACGCCCTGACGAGCTCTTACCGATG
CCTTTCTACGTGCCGGGAGAGCGGAACAAACATTTGCGTGCGGCAGTGTT
GAAGCACTACCTCGCCTGCACCGTGCTCGCGGACGGGGTCCTTGCGGCCA
GCATCCAGCACCCCGAGGCCCCGAAGGAGCCACGCATGTCCCCTTTttct
gccgcctccttccccgcggaCGGACTGCTCTCTTTGCTCCTGAGCAATAT
catagaagaggaggagtttCAGCTCGGAAAGATGCGGGAGCGCGGTGGCG
CTTTTCCCAGGAAAATCAGCGCCGCGGTGCAATCACGGAGGCGGTctgac
tcctcccctccccgtcctctgtcACTTTCTTCACTTCCTGTACTGAGTGC
GCGGGAAAATAGTGGAAAACAGCAACATCAGGAAGCCGGGCAGGGTCTGC
CGCAGGGACGGAAAGACCTGCGAGGACAGCAGCGAGAGCAACGACATCTG
CAAAACAAAGCGCAAGAGAGAAAAGTACAAAATCAAGGGACCACAAGGCA
AgaaaagcagcagcaccaacGGAAGCAAAATCAGGAAATATGCAAATCAT
CATCTTGTTCGTCGTTGGGGCGTCGCGCTACCAGCCTGGGGGACAGCAGC
GTTCCTGTCAAAAATTATGGGAATGGGGACCAAGATTCCTGCAACGATCG
TCTTGTGAAGGACCAACCTACCTTCACCCAGCAGCTTTATGAGAACAAAG
AACTCGTGATGGCTCTTAAACTGTACTGGCAAAGCAAGCAAGAGGACAGG
CAGTCGCGTCGGCAGGTACGATCGTCCTCGAGTACTATGACCTCGACGGC
ACCATCGCCGCCCAAGACTGTTAGCACTCCACCAGCTGTACAACCGGTAG
ACGCGACCGCAATTCGATTGCCGTTGCCATCAGGGTAG back to top
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