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Properties
| Property Name | Value |
|---|
| Product | lipase class 3 |
| Orig transcript id | gnl|cribi|Naga_100101g8.9050.mrna |
| Orig protein id | gnl|cribi|Naga_100101g8.9050 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:894448..896701 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3165 ID=rna3165|Name=rna3165|organism=Nannochloropsis gaditana|type=mRNA|length=1695bp
CGCTCCCGGCGAGAAAAGTCAGACACAACAAGAACAGGAAGGCAAGTAAG
CACGGGATAAGTGGGCGATAAAGGTGTGCAACTGTTTGCATGGCAAACAG
GGTCAAGGTGCTAAGTATGCTGCTTTGTACCGTGAATAGGAAGTGAACCG
CTTACAAAAAGTCTCACATTGCCCCAACCAGGCATAGCTAAAAGTATCTG
ATCCCCGCATAGAATATGACGCCCAACTCGGCCTTCCAAAACTTACGCGA
CACGGCAACCAACATCTTGAGCGCTCAGAAGGACATGCAGGCATCAGAGA
GGACCAGCATCGTCCGTGTCGACCACGAGGCAGTGGGAAGATTAGCGGCT
CAATTTTCCTTGAGTGAGATCCGTGACAAAGTTGCACGAGTTGGGCTGCC
GCTAAAATTTCCAAGACCTTTGGATGAATTAAATTTTCATGCCATGTTAT
CATTGTTAAGCTTTGGGAAGGCGTATGAGGGCGATTTCATTAGTCAATCG
GGCCTTCTGAGAGAATCGGCGCGGGATACGGTACTCTTCGGCTTGATCGG
TTTGCATTTAAGCAAGACAGATCTACGGGCTGGCTTTCTCATGACAGTCA
CCCGCTCGGACGTGGCGAGTTACTTCGGAATCGAACCCATGGAAAATGTG
CCCCATGATAGCATGCCTGCCATTCGTGTCGAGCGTCCAGGTCCTTTAAG
TCGATTAGTCGACGAGCTGGTCACGTCTATGAACACTGTGGGCGCACGAC
TGAAGGAACTCGGTGAGCCGGACCTCGCGCACTTCATCTTGGCTGCCATG
CGGGGGGAGGAAGTCCCGACGGTGGCCAGACTGGTGACCGCGTTGGATGC
TGCTTTTCCCTCTACCTTCGGTGCGCCTTTGCCGTGTCCTGGGTCCAGGA
CTGAGACGGGGTTTCATTGCCGCAAGAAGTCTTTGATGCTGGCAGGAGAG
CTTTACCATCGCCTGCGACACAGCTTTGCTGAATTCGACTTCCAAGATTT
CTCACGGGCACCGGGCTATGCGACCCCCGCCCTCATCACGTTCTTGGTCT
CTCGAGGTGTCCTCTGCCCCATGGAGGACGACGGGGGGGATGAACAAGCC
CACGCGGCCGCAGTCGCTCGGCTGCTAGAGAATCCTGACAACGTGGCACC
TTTGACGGCCGGGACGATGGTGGCGATGGACGAGCTAGCCGTCAGGATGG
CGGAGGCAGCGACAGAGGGCGAGGTGGAGGGCAGCCATGCCTCCTCGACG
GAGAAGGCGGTGGTCCCCTTGGACCTCAGCTATTTCCTGGACGAAATGTG
GTCCAAGCAGGAGAGTGAAAGACGGCGTCAGCAAACAGAACCTGCTGGAA
ATGGGGAGCAATCATGTGCTGCAACGGAGCCCGCCACGGGGCCGTTGCAT
GCTGAGATGGCACCAGCCGGGCCCTCCTTTGTTCCTCCGCGCGGTCAGAC
AGTCATGTAGAGCCAGGGTATTGTGATTTGTGGTGATCTCACATTTGACG
AGTAGAGATAAAAAGCATTCAAGACGAATGGTAAAGGACCGGTTTTGAAA
CGCGTAATACCCAAAGCAAGCATGTCGCTTATTTTGGGTTTCTAGGAGGC
GAAAATTATCTCAAGCTATTTCTTGTGTCCAGTATACAACTCACCTTTCA
ACCTGCGCTGTACAAATTTTTTGTAACCTCTAGTCAAGCACCATT back to topprotein sequence of rna3165 >rna3165-protein ID=rna3165-protein|Name=rna3165|organism=Nannochloropsis gaditana|type=polypeptide|length=477bp
MTLGQRSNGRQLRTWATLIVSALAGTKALHDMHRPFEAEFTPDGHVRELK
LDEALAGDWGYRLLEPYMVYNESDTTPNNYDPWFPGCPVFDNLNKVASFG
CNFIRLNKDVLTAFWVDFSKTASTTRPMNPDGLLPQILRDHRPDPPRQVG
RETIHAERPTYYYCYRLILLMYSIAFEYERSDMQSILPKLVEDWDRERWY
MVDYLKQTNINWKNIPHRQSPIAVSMMKGDRMMVVIRGTIWTEEWCKDFQ
YRWADDEDGLFPGRTHEGMYSVFVDFYKGLEEEVESRQPAHVLVTGHSLG
AGIANMIGLRLENSLQHKPRVDVIGFGGPNTGDTDFADIYRRTVNSRHLI
FLGHGSSPNPNMYTAGDITAQYTCEPYPGCDVLATGPFGKTYKYVRPHNQ
VPFYPEDMPNPKTWNDIANVRRIIPSTKRVIASHICSYICWTSLAVGDLD
SRCYFASEEGRPDLPQSYYCDVSQAPI back to topmRNA from alignment at CM002460.1:894448..896701+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3165 ID=rna3165|Name=rna3165|organism=Nannochloropsis gaditana|type=mRNA|length=2254bp|location=Sequence derived from alignment at CM002460.1:894448..896701+ (Nannochloropsis gaditana)
TAAAGCAACTTGTACATCATACGACAGGCATCCCTGCGGCAAGACATACC
TTATCGTTCACCATAAGAACGAGAGGGCCGCTTAGTCTTGTTTGGGATTT
GCTTTGGTAGTTTTGGAAGGAAGTCTTGCAGGTCATGACGCTTGGACAGC
GGTCAAACGGGAGGCAGTTGCGGACATGGGCAACACTTATAGTCAGTGCT
CTTGCCGGCACGAAAGCGTTACATGACATGCACCGTCCCTTTGAAGCAGG
TAGTTAGATACAACACTTTATGGCGGCTCTTATTTGTGGACTGCTGTTGT
CCTTGGTCTCATTCCGCTCGAATGAAATCGCTTTGCACGTTGACCAATCG
CTATTTTTCACCTCTCTCCACTCCCCGACGCACAGAATTTACGCCAGATG
GACATGTGCGGGAGCTGAAACTCGGTAGGTCTGATTTTGAAAAGAGCTGG
AGTTGGTATTGAGTCGACCGAAAACATTCTTGGGTTATACCCGTACGTCT
CACTCGTCGAAACATTATACAGACGAGGCATTAGCCGGGGATTGGGGCTA
CCGCCTTCTTGAGCCGTATATGGTGTACAATGAGAGTGATACCACACCAA
ATAATTATGATCCGTGGTTTCCGGGCTGCCCTGTGTTTGACAACTTGAAT
AAAGTGGCGAGCTTCGGATGCAATTTTATACGATTGAACAAGGACGGTAa
gtcccttcccctcgatTTTTTCCAGATTCCAATTGTACATTTTAGGGCCA
TTGCTCTGTTCTTCCTGATCATTTACATTTTCCCCTGATTTCGTACAACT
CATACATATTTATTTATAGTCTTGACGGCTTTCTGGGTGGATTTTAGCAA
GACCGCGAGCACCACGCGGCCGATGAACCCTGACGGCCTCCTGCCCCAAA
TCCTGAGAGACCATCGGCCGGACCCCCCGCGCCAGGTCGGCCGAGAGACT
ATCCACGCAGAACGCCCCACCTACTATTACTGCTACCGCTTGATCCTCCT
CATGTACTCGATTGCCTTTGAGTACGAGCGGAGCGACATGCAATCCATCT
TGCCGAAACTCGTGGAGGACTGGGATCGGGAGAGATGGTACATGGTGGAC
TACCTCAAACAAACGAATATAAACTGGAAGAATATTCCGCACCGTCAGTC
CCCCATTGCTGTCTCGATGATGAAAGGGGATCGGATGATGGTCGTGATCC
GAGGTACAATATGGACAGAGGAGTGGTGCAAAGACTTCCAGTACCGGtgg
gcggacgacgaggacggcctGTTCCCGGGTCGCACGCACGAAGGCATGTA
CTCTGTATTTGTCGATTTCTACAAGggcctcgaggaggaggtcgaaaGCC
GGCAGCCCGCGCATGTCCTCGTCACGGGCCACAGTTTGGGGGCAGGCATC
GCGAACATGATCGGCCTGCGCCTGGAGAACAGCTTGCAGCACAAGCCTCG
CGTTGACGTGATCGGCTTCGGGGGCCCGAACACCGGGGACACGGACTTTG
CGGACATCTACCGAAGGACAGTCAACAGTCGGCACCTGATCTTCCTTGGC
CATGGGAGCTCTCCGAATCCCAATATGTACACGGCAGGGGACATCACCGC
GCAGTACACCTGCGAGCCCTACCCTGGCTGCGATGTGTTGGCGACGGGTC
CGTTTGGAAAGACCTACAAGTACGTGCGTCCGCACAATCAAGTGCCCTTC
TACCCAGAGGACATGCCCAACCCCAAGACTTGGAATGACATCGCCAACGT
CCGACGCATCATTCCGTCCACAAAGCGGGTCATTGCTTCCCACATTTGCA
GCTATATTTGCTGGACCTCACTCGCGGTGGGAGATCTGGATAGCCGGTGC
TACTTTgccagcgaggagggaaggccggaCCTGCCCCAATCCTACTACTG
TGACGTAAGTCAGGCTCCTATATAGGAGTCCTGGAGTCCTTTCCGTGACG
GAAAGAGCATGCGAGGAGTTCATATGAATCATAAAGCATTCTGTATTCTG
CGCGAAAGTAGAGGTTGTGGGCCTCAACCTCCTTTGCCTGATCTTCGGAC
ACGGACGCGGTCCGGTTCTGTCGAGTAGACAGTCGCTTGTTGTTTGTCTA
TACAATTGATGTAATCCATAAGTGTCgtcgagaggaaggcgtcaCATGGT
TTCCTCGAAAGTAGTTTTTTGAAACGAAGCTAGGCCAGCCGAAGCGTTGG
CAGGGTCTTTGACGAAGGAGGCATATGCGATTAAAGAAATAGCCACATAA
CATA back to topCoding sequence (CDS) from alignment at CM002460.1:894448..896701+ >rna3165 ID=rna3165|Name=rna3165|organism=Nannochloropsis gaditana|type=CDS|length=5736bp|location=Sequence derived from alignment at CM002460.1:894448..896701+ (Nannochloropsis gaditana)
ATGACGCTTGGACAGCGGTCAAACGGGAGGCAGTTGCGGACATGGGCAAC
ACTTATAGTCAGTGCTCTTGCCGGCACGAAAGCGTTACATGACATGCACC
GTCCCTTTGAAGCAGAATTTACGCCAGATGGACATGTGCGGGAGCTGAAA
CTCGACGAGGCATTAGCCGGGGATTGGGGCTACCGCCTTCTTGAGCCGTA
TATGGTGTACAATGAGAGTGATACCACACCAAATAATTATGATCCGTGGT
TTCCGGGCTGCCCTGTGTTTGACAACTTGAATAAAGTGGCGAGCTTCGGA
TGCAATTTTATACGATTGAACAAGGACGTCTTGACGGCTTTCTGGGTGGA
TTTTAGCAAGACCGCGAGCACCACGCGGCCGATGAACCCTGACGGCCTCC
TGCCCCAAATCCTGAGAGACCATCGGCCGGACCCCCCGCGCCAGGTCGGC
CGAGAGACTATCCACGCAGAACGCCCCACCTACTATTACTGCTACCGCTT
GATCCTCCTCATGTACTCGATTGCCTTTGAGTACGAGCGGAGCGACATGC
AATCCATCTTGCCGAAACTCGTGGAGGACTGGGATCGGGAGAGATGGTAC
ATGGTGGACTACCTCAAACAAACGAATATAAACTGGAAGAATATTCCGCA
CCGTCAGTCCCCCATTGCTGTCTCGATGATGAAAGGGGATCGGATGATGG
TCGTGATCCGAGGTACAATATGGACAGAGGAGTGGTGCAAAGACTTCCAG
TACCGGtgggcggacgacgaggacggcctGTTCCCGGGTCGCACGCACGA
AGGCATGTACTCTGTATTTGTCGATTTCTACAAGggcctcgaggaggagg
tcgaaaGCCGGCAGCCCGCGCATGTCCTCGTCACGGGCCACAGTTTGGGG
GCAGGCATCGCGAACATGATCGGCCTGCGCCTGGAGAACAGCTTGCAGCA
CAAGCCTCGCGTTGACGTGATCGGCTTCGGGGGCCCGAACACCGGGGACA
CGGACTTTGCGGACATCTACCGAAGGACAGTCAACAGTCGGCACCTGATC
TTCCTTGGCCATGGGAGCTCTCCGAATCCCAATATGTACACGGCAGGGGA
CATCACCGCGCAGTACACCTGCGAGCCCTACCCTGGCTGCGATGTGTTGG
CGACGGGTCCGTTTGGAAAGACCTACAAGTACGTGCGTCCGCACAATCAA
GTGCCCTTCTACCCAGAGGACATGCCCAACCCCAAGACTTGGAATGACAT
CGCCAACGTCCGACGCATCATTCCGTCCACAAAGCGGGTCATTGCTTCCC
ACATTTGCAGCTATATTTGCTGGACCTCACTCGCGGTGGGAGATCTGGAT
AGCCGGTGCTACTTTgccagcgaggagggaaggccggaCCTGCCCCAATC
CTACTACTGTGACGTAAGTCAGGCTCCTATATAGATGACGCTTGGACAGC
GGTCAAACGGGAGGCAGTTGCGGACATGGGCAACACTTATAGTCAGTGCT
CTTGCCGGCACGAAAGCGTTACATGACATGCACCGTCCCTTTGAAGCAGA
ATTTACGCCAGATGGACATGTGCGGGAGCTGAAACTCGACGAGGCATTAG
CCGGGGATTGGGGCTACCGCCTTCTTGAGCCGTATATGGTGTACAATGAG
AGTGATACCACACCAAATAATTATGATCCGTGGTTTCCGGGCTGCCCTGT
GTTTGACAACTTGAATAAAGTGGCGAGCTTCGGATGCAATTTTATACGAT
TGAACAAGGACGTCTTGACGGCTTTCTGGGTGGATTTTAGCAAGACCGCG
AGCACCACGCGGCCGATGAACCCTGACGGCCTCCTGCCCCAAATCCTGAG
AGACCATCGGCCGGACCCCCCGCGCCAGGTCGGCCGAGAGACTATCCACG
CAGAACGCCCCACCTACTATTACTGCTACCGCTTGATCCTCCTCATGTAC
TCGATTGCCTTTGAGTACGAGCGGAGCGACATGCAATCCATCTTGCCGAA
ACTCGTGGAGGACTGGGATCGGGAGAGATGGTACATGGTGGACTACCTCA
AACAAACGAATATAAACTGGAAGAATATTCCGCACCGTCAGTCCCCCATT
GCTGTCTCGATGATGAAAGGGGATCGGATGATGGTCGTGATCCGAGGTAC
AATATGGACAGAGGAGTGGTGCAAAGACTTCCAGTACCGGtgggcggacg
acgaggacggcctGTTCCCGGGTCGCACGCACGAAGGCATGTACTCTGTA
TTTGTCGATTTCTACAAGggcctcgaggaggaggtcgaaaGCCGGCAGCC
CGCGCATGTCCTCGTCACGGGCCACAGTTTGGGGGCAGGCATCGCGAACA
TGATCGGCCTGCGCCTGGAGAACAGCTTGCAGCACAAGCCTCGCGTTGAC
GTGATCGGCTTCGGGGGCCCGAACACCGGGGACACGGACTTTGCGGACAT
CTACCGAAGGACAGTCAACAGTCGGCACCTGATCTTCCTTGGCCATGGGA
GCTCTCCGAATCCCAATATGTACACGGCAGGGGACATCACCGCGCAGTAC
ACCTGCGAGCCCTACCCTGGCTGCGATGTGTTGGCGACGGGTCCGTTTGG
AAAGACCTACAAGTACGTGCGTCCGCACAATCAAGTGCCCTTCTACCCAG
AGGACATGCCCAACCCCAAGACTTGGAATGACATCGCCAACGTCCGACGC
ATCATTCCGTCCACAAAGCGGGTCATTGCTTCCCACATTTGCAGCTATAT
TTGCTGGACCTCACTCGCGGTGGGAGATCTGGATAGCCGGTGCTACTTTg
ccagcgaggagggaaggccggaCCTGCCCCAATCCTACTACTGTGACGTA
AGTCAGGCTCCTATATAGATGACGCTTGGACAGCGGTCAAACGGGAGGCA
GTTGCGGACATGGGCAACACTTATAGTCAGTGCTCTTGCCGGCACGAAAG
CGTTACATGACATGCACCGTCCCTTTGAAGCAGAATTTACGCCAGATGGA
CATGTGCGGGAGCTGAAACTCGACGAGGCATTAGCCGGGGATTGGGGCTA
CCGCCTTCTTGAGCCGTATATGGTGTACAATGAGAGTGATACCACACCAA
ATAATTATGATCCGTGGTTTCCGGGCTGCCCTGTGTTTGACAACTTGAAT
AAAGTGGCGAGCTTCGGATGCAATTTTATACGATTGAACAAGGACGTCTT
GACGGCTTTCTGGGTGGATTTTAGCAAGACCGCGAGCACCACGCGGCCGA
TGAACCCTGACGGCCTCCTGCCCCAAATCCTGAGAGACCATCGGCCGGAC
CCCCCGCGCCAGGTCGGCCGAGAGACTATCCACGCAGAACGCCCCACCTA
CTATTACTGCTACCGCTTGATCCTCCTCATGTACTCGATTGCCTTTGAGT
ACGAGCGGAGCGACATGCAATCCATCTTGCCGAAACTCGTGGAGGACTGG
GATCGGGAGAGATGGTACATGGTGGACTACCTCAAACAAACGAATATAAA
CTGGAAGAATATTCCGCACCGTCAGTCCCCCATTGCTGTCTCGATGATGA
AAGGGGATCGGATGATGGTCGTGATCCGAGGTACAATATGGACAGAGGAG
TGGTGCAAAGACTTCCAGTACCGGtgggcggacgacgaggacggcctGTT
CCCGGGTCGCACGCACGAAGGCATGTACTCTGTATTTGTCGATTTCTACA
AGggcctcgaggaggaggtcgaaaGCCGGCAGCCCGCGCATGTCCTCGTC
ACGGGCCACAGTTTGGGGGCAGGCATCGCGAACATGATCGGCCTGCGCCT
GGAGAACAGCTTGCAGCACAAGCCTCGCGTTGACGTGATCGGCTTCGGGG
GCCCGAACACCGGGGACACGGACTTTGCGGACATCTACCGAAGGACAGTC
AACAGTCGGCACCTGATCTTCCTTGGCCATGGGAGCTCTCCGAATCCCAA
TATGTACACGGCAGGGGACATCACCGCGCAGTACACCTGCGAGCCCTACC
CTGGCTGCGATGTGTTGGCGACGGGTCCGTTTGGAAAGACCTACAAGTAC
GTGCGTCCGCACAATCAAGTGCCCTTCTACCCAGAGGACATGCCCAACCC
CAAGACTTGGAATGACATCGCCAACGTCCGACGCATCATTCCGTCCACAA
AGCGGGTCATTGCTTCCCACATTTGCAGCTATATTTGCTGGACCTCACTC
GCGGTGGGAGATCTGGATAGCCGGTGCTACTTTgccagcgaggagggaag
gccggaCCTGCCCCAATCCTACTACTGTGACGTAAGTCAGGCTCCTATAT
AGATGACGCTTGGACAGCGGTCAAACGGGAGGCAGTTGCGGACATGGGCA
ACACTTATAGTCAGTGCTCTTGCCGGCACGAAAGCGTTACATGACATGCA
CCGTCCCTTTGAAGCAGAATTTACGCCAGATGGACATGTGCGGGAGCTGA
AACTCGACGAGGCATTAGCCGGGGATTGGGGCTACCGCCTTCTTGAGCCG
TATATGGTGTACAATGAGAGTGATACCACACCAAATAATTATGATCCGTG
GTTTCCGGGCTGCCCTGTGTTTGACAACTTGAATAAAGTGGCGAGCTTCG
GATGCAATTTTATACGATTGAACAAGGACGTCTTGACGGCTTTCTGGGTG
GATTTTAGCAAGACCGCGAGCACCACGCGGCCGATGAACCCTGACGGCCT
CCTGCCCCAAATCCTGAGAGACCATCGGCCGGACCCCCCGCGCCAGGTCG
GCCGAGAGACTATCCACGCAGAACGCCCCACCTACTATTACTGCTACCGC
TTGATCCTCCTCATGTACTCGATTGCCTTTGAGTACGAGCGGAGCGACAT
GCAATCCATCTTGCCGAAACTCGTGGAGGACTGGGATCGGGAGAGATGGT
ACATGGTGGACTACCTCAAACAAACGAATATAAACTGGAAGAATATTCCG
CACCGTCAGTCCCCCATTGCTGTCTCGATGATGAAAGGGGATCGGATGAT
GGTCGTGATCCGAGGTACAATATGGACAGAGGAGTGGTGCAAAGACTTCC
AGTACCGGtgggcggacgacgaggacggcctGTTCCCGGGTCGCACGCAC
GAAGGCATGTACTCTGTATTTGTCGATTTCTACAAGggcctcgaggagga
ggtcgaaaGCCGGCAGCCCGCGCATGTCCTCGTCACGGGCCACAGTTTGG
GGGCAGGCATCGCGAACATGATCGGCCTGCGCCTGGAGAACAGCTTGCAG
CACAAGCCTCGCGTTGACGTGATCGGCTTCGGGGGCCCGAACACCGGGGA
CACGGACTTTGCGGACATCTACCGAAGGACAGTCAACAGTCGGCACCTGA
TCTTCCTTGGCCATGGGAGCTCTCCGAATCCCAATATGTACACGGCAGGG
GACATCACCGCGCAGTACACCTGCGAGCCCTACCCTGGCTGCGATGTGTT
GGCGACGGGTCCGTTTGGAAAGACCTACAAGTACGTGCGTCCGCACAATC
AAGTGCCCTTCTACCCAGAGGACATGCCCAACCCCAAGACTTGGAATGAC
ATCGCCAACGTCCGACGCATCATTCCGTCCACAAAGCGGGTCATTGCTTC
CCACATTTGCAGCTATATTTGCTGGACCTCACTCGCGGTGGGAGATCTGG
ATAGCCGGTGCTACTTTgccagcgaggagggaaggccggaCCTGCCCCAA
TCCTACTACTGTGACGTAAGTCAGGCTCCTATATAG back to top
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