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Properties
| Property Name | Value |
|---|
| Product | metallo-beta-lactamase |
| Orig transcript id | gnl|cribi|Naga_100015g4.6406.mrna |
| Orig protein id | gnl|cribi|Naga_100015g4.6406 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:853380..855592 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3150 ID=rna3150|Name=rna3150|organism=Nannochloropsis gaditana|type=mRNA|length=3738bp
GGCGTCAAGACCAGGCGTTCTCCCAAGCAATTACCACCATCACGATATTA
ACACTTCCCCGTCTTTCTCCTCTCGTCACTCGCACTATTCATGCAGGAAA
AGACATCTCGCCACGTGTTCCAGTGCGTGCATGCCAGGGGAAACGGCGGA
CGCCAGTTTTGGGGTCTAGGCGTGTAGCCGCGTGAACATTTCCAAGTCGA
GCCATGCTTCGACGGAACCCTGCCAAAAGGACCCTGGCACGTGATATCTT
GCGGATGACCTCCAGGCGCCTGGTCGTTCGTGCCATGCCAGCCCCGGCCT
TCAGCAAGGTGGCCAGGGGGTCCCAGGGCAGATCCGTGCCGCCCTTTTCC
ATCTTCAGCATGTTTCCACCCATCGGGCCTCAAGGATGTCCATTTCATGT
CTCTGCATTATGGATCTCAGGCAGTCAGTCGGCTACAAACACACTTGGAG
GGATAAGGGCCCTGTTAATTGATCGCAGGAGACCCTCTAGGGTCCAAGAT
GAGCGCTTCCCGGCCTCCAGGTTTTTCCTGCCGCAGGAATGCCCCCACGT
GTTTCTCCACCCACGTCACCTACCGCCTGCCACATCGTCCTTGCCTTTCT
CTGGAGCAGGCGCTTGGGTCCGTCCCTTCTCCTCTCAACCGGCGCCAAAG
CGAGACCCGAAACGGGAGGAGGCGTCCAAGGCCGCGCCCGTCTCGGGCAG
CCATGTTGCCCCAGCGTCCCCATCCTCTTCCTCGACGTCCGCTGCGACCA
ATGCCCAAGCCCCTCCACGGTACGTGGAGGAGGGCATCAAACCCGAAGAC
CTGAAGCCCGCGCAGGGCGTGGAGGACCCTCGGAAAGAGGAGAATTCGCC
GGCGACGGTGGCGGGGATCCTGAAACGCTACACCATGAAAGCATTCCACG
GCCTCCAGATCTTGCCAGCGGCAATATTTTCCTTCACCGTGACCGCGGGA
CGCTGGATGATCACTTTTGTGGTGGAGACGGTCAAGAACCCGAGTTCTTT
GCGGGACCGATGGCTGCACCTGAAGAAGGTAGTGGTGGAGGAATTCCACC
ACTACAAGCTCGGCTCCAAAGTCCTGTGGTCGGACATCAAGACCTCGTCC
TCCATCGTGAGTCGGGTCCTGCACGGGAATACGCTGAGCCGCCGGGAGCG
CCGGCAACTGACGCGGACGACGGCCGACTTGTTCCGCCTGGTCCCCTTCG
CGTTCTTCGTGATCGTGCCCTTCATGGAGCTCCTGTTGCCCTTTGCCCTG
AAAATCTTCCCGAACATGCTCCCGTCCACGTTCCAGGACAATTTGAAGAA
GGAAGAGAATCTGAAGCGCGAGCTGAAAGTGCGCTTGGCCTTGGCAGGCT
TCTTGAAGGACACGCTAGGGGAGATTGCAAGTAAGAAGAAGGGCCAGGGG
GAGGGCGAAGGGAAGGAAAGTCCCAATGCCGCCCTTCTGACGGAATTCGT
CGAGAAAGCCCGGGCAGGCACCCACATCTCCACCAACGACATCAACCGAT
TCGCCCGCCTCTTTAAGGACGAGCTCACGCTCGACAACATGTCGCGGCCG
CAGCTGGCGGGGATGTGTGTCTACATGGGCCTCCGTCCTTACGGCAGTGA
CAATTTCTTGCGCTTCCAGCTTCGAGCGAAGCTGCGGAATCTAAAGGAGG
ACGATCAGCGCATCGTCTGGGAGGGGGTGGACAACATGAACAAGGCGGAA
CTGAGGGAAGCCTGCCGGGAACGGGGCATGCGCGCCTACGGCCTGACCCA
ACTTGGGTACCGGCGGCAATTGCAGCAGTGGTTGGATTTAAGCATCAACA
AGGAGGTGCCCATTTCCCTCCTGATCCTCTCCCGGGCATTCACGCTTGAC
TCCAAATTCACGGATCCGGCCGCGGCGGTGGCGGATTCGATCAGCAGTCT
GGACGAGGACGTGGTGAACGAGGTTCTGCTCGACGTGGCGACGCGGTCAG
AGCTTCAAAACCCGGACCTCCGGGCCCGAAAATTGGAGAGCATCGAGCGT
CAAAACGAGCTGATCGAGGAGGAGCGAAAGCGGGAGGAAGGCCGGAAGAA
GAAAGCGGAGGAAGAGAAGAAGAAAGCGGAGGAAGAGAAGAAGAAAGCGG
AGAAAGCGGAGGAAGAGAAGAAGAAGGCGGAGCAGGAAGCGGCGGCCGAC
ACGACAGCCGCGTCCGCTCCAGGGAAGGAAATGGAGGACGTCAAACTCGC
GGATCCGGCTACAGAGCAGATCAAAGAGGCCGTCGCCCACGCCTCGGCGA
TGACGGGGAGCAGCCCTGCCGAGGGGGTGAACCCTCCTCCACCGCCCCCT
GCAGAGTCGTTCTCACCCGTGAAAGTCCTGACGGAGAACGAGGTGGTGAG
CACGGCGAAGCCCTCCTTGGACGAGGATGCAGCCAGGCAGGCCTCGGGAA
CCAGCTCGGCCGCCCCTGCGCCAGCATCGTCGATCCTAAGCACGGATTCC
ACGGCGCTGGAGGGGGTGGGGGAGAAGGAAGCGTCGGAAGCGGACAGGAA
GGAGGGAGAAAAGCGGGAGTTGACGGCCGCGGAGATTGCTGCCCTGCGGA
CCCTGTTGAAGGAGTCGTCCGTCGAGCAGGAGAAGACGGTTCTTGCCCAG
CTCAAAGCAGAGCTTCAGGCCTCACCCTCTGCCAAGGTAGAGGCAGTCCT
CGCCGCGGTCAAAGGGGAGCTGCAGGACGCAGGCAAGGAGGTCACTGGCG
CCGGAGGGGCGGATGCGGGGAAAGCTACCCTCGGTGCAGGCGCAGGCGCG
GGCCCGGAAAAAACACAGCCTGCTTTCTCGTCGGAAAAGACCTCAGATTT
GGATTTGACGTTGCCCCCACCGTCCTCCTCCGCCGAGAACGTTCCCGACG
CTGCACAGGCACTGGCAGCCAGCACTGCACCTGGGGCACAGGAGGCGCCT
CCGATCACGTCAGGATCACCCACGTCTTCTCCGTCGCCGGCGCCGGGGAA
GGCGGAGGGCAGTCCGCCCGCCTCGCCAGCCCCTGAGCCGCCGTCGTCTG
CCATGGACAAGGCCTTGGAGCGGATGCGGATGAAGGTTGCCTCCATGTTG
GATAAATTGGAGGTGGACATGGAAAAAGTGGAGAGCACGATTGGGGACAA
GCTGCACATGCTTGACAAGGACAAGGACGGCGTGTTGACCACGGCGGAAC
TGTCGGAGGTGATCTCCCACGTGCTGAAACGACACACCTCCGAAGAGGAG
GCACAGAAGATCGCCAGCACGGTTGACAAGGACGCCGATGGGATTTTGAC
TGTGCAGGAGCTGATGGAGTGGATCGAGCACAGGGAAGAGCTCTTGCAGG
AGCTCGGGGAGGAGGAAAACAACGCTTCTTCCGCCTCTGCCACCGTGCCG
AAGAAGACCCCGACTCCGCCGGGGATAGGGGAAAGGTCGTCAGGAACCGC
AGGTGGAGGCGGCGGGGAGTCAACATAGTTATCTATGCATCGGGTGGTTA
AAGGGAAGGTGGGGAGCGAGGCCATGGGAGCAGGAAAGTCGAATTCATGT
GGCTGGGAATCAGACTATTGGCGAAGATAGAGTCCCCTGACATCCGGTGT
CGAATATGTAGTGAAAAGTGAGCACGACAGCCTCGCTGCCATGCCTGATG
AGTCGCACGCTCTAACAGGACAAAGGAAAATGGCACGCACGCAGTGTCAC
TCGGATACACGCCAGTGTAAGGACTCTGACAGAACAAAATTATGGGGAAA
AATCGAAATGCGCAAAGCGACTTCTGATTTAATTGGGA back to topprotein sequence of rna3150 >rna3150-protein ID=rna3150-protein|Name=rna3150|organism=Nannochloropsis gaditana|type=polypeptide|length=519bp
MDTNCPCACVADVEESSNHRAASREKNSAPIAALPPTLPEQAQASTSTSA
RPPFKRADSVDSPSVATSNPADAGFEVSSAWSVAGIGTCIQLRHRAFGLH
IAMDIGTSAGETLGAGHIFVSHGHIDHIGALLNHARARTLSNKPAKYYVP
VPATEPLLRAKAAYEALDGCAFNAEIVGVEPGDICRIHPNVRVEVFPTKH
RVPSQGYAIIREKSKGLKAGCRNLSSHELARRRKQGESVVEIEDIVEVAY
TGDTILKAVLDQPLVRQARLLILECTYLEGEIVWAHSWQHVHMQEIVKHA
AAFASNERVVCCHVSRKYKRWDNVLRCFQSGMAPVPALAAKIGVTLAGFG
RAEPVTWLVDYQKEQAAAAMAAAAAAAGEGGSGSPVGHAEGPHRGPSGGN
VRPRREKGGADLEDIGVQSVDATPAEETRWMGSNGGLKDELPEVKTKEEA
NRMLRVLSEDLGLQPRAESLLNCSEEGHEEEQGQGEKQQQELKGEKRESV
GKGWEVTSEEREEESSLFF back to topmRNA from alignment at CM002460.1:853380..855592- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3150 ID=rna3150|Name=rna3150|organism=Nannochloropsis gaditana|type=mRNA|length=2213bp|location=Sequence derived from alignment at CM002460.1:853380..855592- (Nannochloropsis gaditana)
GGCTTGTTGTAGACATTACTGGCATGGACGGGAGAGGGAGGCCGTCCTGT
CAGGAGGTATGTACGTGTATTCAACCAATTCCTTAGATTGCGGACGCCCG
CAAAGTGGACGAATTTTCCTCAAGGTCGCAGTTGGTTGGAAGAACTAGGT
CTTGTAATACGTAAACTCGTATCCCGTCAGCCGCGCATGGCTTTGATCTG
GTACAAAATGCGACAACCACAAGTGCGAAATCGATAGGATGCTCACGCAA
CACATTTTCCAACATTTTTCCCGTGATGATTTTCTCGCACAGGACGAATA
TTTTGTTCATCAGTTGACTCTCCGACTCGAAATCAATTTCACCTATCTCA
CTTCGTCCTTGGCCTCGTACGTTCCATATGGACACAAATTGTCCCTGCGC
CTGCGTAGCGGACGTTGAAGAATCTTCCAATCATCGTGCAGCCAGCAGAG
AAAAAAACTCTGCCCCAATAGCGGCCTTACCGCCAACACTACCCGAGCAA
GCACAAGCATCAACGTCCACCTCCGCTCGCCCCCCCTTCAAGCGTGCAGA
CTCTGTGGATTCCCCGTCTGTGGCAACCAGTAATCCCGCTGACGCTGGGT
TTGAGGTTTCTTCTGCATGGTCTGTGGCAGGTATTGGCACATGCATCCAA
CTCCGTCATCGGGCGTTCGGGCTGCACATCGCCATGGACATTGGAACTAG
CGCTGGAGAGACGCTGGGGGCAGGGCATATCTTTGTCTCGCATGGCCACA
TTGACCACATCGGTGCTTTGCTAAACCATGCTCGTGCTCGAACGCTTAGT
AACAAACCAGCCAAGTATTATGTGCCTGTTCCGGCCACAGAGCCGCTTCT
GCGGGCGAAGGCAGCTTACGAAGCTCTTGATGGGTGTGCGTTCAATGCCG
AGATTGTAGGAGTGGAACCGGGCGATATATGCCGCATTCATCCCAACGTT
AGGGTGGAGGTTTTCCCGACGAAGCACCGCGTCCCCAGCCAAGGGTACGC
CATAATCCGTGAAAAGAGCAAAGGCTTAAAGGCCGGGTGCCGTAACCTGT
CCTCCCACGAATTGGCGCGTCGCCGGAAGCAAGGAGAGAGCGTCGTTGAG
ATAGAGGACATCGTCGAAGTCGCCTACACGGGAGATACTATCTTGAAAGC
TGTACTCGACCAGCCTTTGGTCAGACAGGCCCGCCTGTTGATTCTTGAGT
GCACCTATCTGGAGGGGGAGATTGTATGGGCCCACAGCTGGCAACACGTG
CATATGCAAGAAATCGTCAAGCATGCTGCAGCTTTTGCCAGCAATGAGCG
GGTCGTCTGCTGCCACGTGTCCAGGAAGTACAAGCGGTGGGACAATGTCT
TGAGGTGTTTCCAGAGCGGCATGGCCCCTGTCCCCGCACTGGCAGCGAAG
ATCGGCGTAACCTTGGCCGGATTTGGGAGGGCGGAACCTGTGACCTGGCT
GGTCGACTACCAAAAGGAACAAGCAGCAGCAGCGATGGCGGCAGCTGCCG
CGGCTGCAGGAGAAGGAGGCTCAGGAAGCCCTGTTGGGCACGCCGAGGGG
CCGCATCGGGGGCCAAGCGGGGGCAACGTTCGTCCCAGGCGTGAGAAAGG
CGGGGCGGATTTGGAGGATATAGGTGTGCAAAGTGTGGATGCGACACCTG
CCGAGGAAACGAGGTGGATGGGATCAAATGGAGGATTAAAGGATGAGCTC
CCCGAGGTGAAGACGAAGGAGGAGGCTAATCGGATGTTGCGGGTCCTGTC
GGAGGATCTCGGGCTGCAACCGAGGGCGGAATCTTTATTGAATTGCTCGG
AGGAGGGACATGAAGAGGAACAGGGCCAAGGAGAGAAACAACAGCAAGAG
CTGAAAGGGGAGAAGAGGGAGTCAGTGGGCAAGGGGTGGGAGGTCACCTC
GGAGGAAAGGGAGGAGGAATCCTCCTTATTCTTTTAAACATAGTTTGGGC
CTTGCTATTCAAAGTGTGAGTGTAATTAGTGTAATAGAGAAAAGAAGGAG
AGAGTGCGGAGGGGAAGGGTGAAAATGTAGAGGAAAGCATTAATAGCAGG
GGCGGTTGGCAGTTTTGTGAATAAATAGAGACAATTTGAAAAAGTAGACC
AGTTGATGCTTTATAAGGACAGAGTCGTCTGCCTCTTAAACTATAATCAT
CATTTTAATGGTACGCATGGCGAAATTTAGTGATCACAAATGAGAAAATC
TCTGTAGCGGCCC back to topCoding sequence (CDS) from alignment at CM002460.1:853380..855592- >rna3150 ID=rna3150|Name=rna3150|organism=Nannochloropsis gaditana|type=CDS|length=1560bp|location=Sequence derived from alignment at CM002460.1:853380..855592- (Nannochloropsis gaditana)
ATGGACACAAATTGTCCCTGCGCCTGCGTAGCGGACGTTGAAGAATCTTC
CAATCATCGTGCAGCCAGCAGAGAAAAAAACTCTGCCCCAATAGCGGCCT
TACCGCCAACACTACCCGAGCAAGCACAAGCATCAACGTCCACCTCCGCT
CGCCCCCCCTTCAAGCGTGCAGACTCTGTGGATTCCCCGTCTGTGGCAAC
CAGTAATCCCGCTGACGCTGGGTTTGAGGTTTCTTCTGCATGGTCTGTGG
CAGGTATTGGCACATGCATCCAACTCCGTCATCGGGCGTTCGGGCTGCAC
ATCGCCATGGACATTGGAACTAGCGCTGGAGAGACGCTGGGGGCAGGGCA
TATCTTTGTCTCGCATGGCCACATTGACCACATCGGTGCTTTGCTAAACC
ATGCTCGTGCTCGAACGCTTAGTAACAAACCAGCCAAGTATTATGTGCCT
GTTCCGGCCACAGAGCCGCTTCTGCGGGCGAAGGCAGCTTACGAAGCTCT
TGATGGGTGTGCGTTCAATGCCGAGATTGTAGGAGTGGAACCGGGCGATA
TATGCCGCATTCATCCCAACGTTAGGGTGGAGGTTTTCCCGACGAAGCAC
CGCGTCCCCAGCCAAGGGTACGCCATAATCCGTGAAAAGAGCAAAGGCTT
AAAGGCCGGGTGCCGTAACCTGTCCTCCCACGAATTGGCGCGTCGCCGGA
AGCAAGGAGAGAGCGTCGTTGAGATAGAGGACATCGTCGAAGTCGCCTAC
ACGGGAGATACTATCTTGAAAGCTGTACTCGACCAGCCTTTGGTCAGACA
GGCCCGCCTGTTGATTCTTGAGTGCACCTATCTGGAGGGGGAGATTGTAT
GGGCCCACAGCTGGCAACACGTGCATATGCAAGAAATCGTCAAGCATGCT
GCAGCTTTTGCCAGCAATGAGCGGGTCGTCTGCTGCCACGTGTCCAGGAA
GTACAAGCGGTGGGACAATGTCTTGAGGTGTTTCCAGAGCGGCATGGCCC
CTGTCCCCGCACTGGCAGCGAAGATCGGCGTAACCTTGGCCGGATTTGGG
AGGGCGGAACCTGTGACCTGGCTGGTCGACTACCAAAAGGAACAAGCAGC
AGCAGCGATGGCGGCAGCTGCCGCGGCTGCAGGAGAAGGAGGCTCAGGAA
GCCCTGTTGGGCACGCCGAGGGGCCGCATCGGGGGCCAAGCGGGGGCAAC
GTTCGTCCCAGGCGTGAGAAAGGCGGGGCGGATTTGGAGGATATAGGTGT
GCAAAGTGTGGATGCGACACCTGCCGAGGAAACGAGGTGGATGGGATCAA
ATGGAGGATTAAAGGATGAGCTCCCCGAGGTGAAGACGAAGGAGGAGGCT
AATCGGATGTTGCGGGTCCTGTCGGAGGATCTCGGGCTGCAACCGAGGGC
GGAATCTTTATTGAATTGCTCGGAGGAGGGACATGAAGAGGAACAGGGCC
AAGGAGAGAAACAACAGCAAGAGCTGAAAGGGGAGAAGAGGGAGTCAGTG
GGCAAGGGGTGGGAGGTCACCTCGGAGGAAAGGGAGGAGGAATCCTCCTT
ATTCTTTTAA back to top
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