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Properties
| Property Name | Value |
|---|
| Product | letm1 and ef-hand domain-containing mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100015g5.6394.mrna |
| Orig protein id | gnl|cribi|Naga_100015g5.6394 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:849233..852970 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3149 ID=rna3149|Name=rna3149|organism=Nannochloropsis gaditana|type=mRNA|length=1498bp
TGCTTAAGTAGACTCGCCGATGACCGATGTGCATTAAAGTGAAAAATCAA
AATACCATCTTAGTATACCTCCTTGAGGTCCAACCTCCTCCCCCCCCCCT
TCCAATTCTTCGGATGGCGTCATTCTGATCCCGTGTCCGCCATAATACTA
ATATACCTGAGAGCACGCCTTTCTGAAAAGAGGGTATATAAGCTGGTAGC
ATGTTTTCCATGGTAATCCTCCTGATAAAATTGATGATATTGATGAGATG
GGGTTGGAAGGAACCCTGCACTGTATCTATCACATAACCTTTTTTCATCT
CTTCCCCCTGTATCCTCTGTCATTGACATGGACACCTGGTGCATTGCCTT
AGAGGCACTAGTAGGTCGCTTCCGAAATGGGGCGCGAGACTGACATGGTG
CGCCGTTTGGGGGTGGCATTAGCGGGCTCGTCGACAAATATCTGCAAGAG
AGCCGTCAACGGTGGGAAAGGGGCCATGAGCGTGGTAGCAAGGGTGCGAC
CACCGCCGCGACGACAGGCGTCATTACAGTCCTTACAACTTCTAAGCCAC
TCAACCACATTCCGTGCTATTGCCAGTAGCAGTGTTTGCAGTGCGGTAGG
GGGAGGAAGTGAGGGGGGAGTCAGTCACAAAACTGACAAAGTAAGCTCCA
GTCATGACTGGGCTGCCTTGGTCCGGGATTACGGGAAATCGGATGCCGTG
TCTAGTAGTATACCAATGGAAGTCCCAACGATCGAAGCCACAGTTCGTTG
TTTGGATGACACAGGATCGCGTTACAGCAGGCGTTTGCGAGAAGAGGGGA
AATTACCCGGTGTTTTGTACGGCCCTGGCGTGGACGGCGATAAAGAGAGG
TACCTGATCACCGTGAAGCGTCGAGACATCGAACGTCACATGCGACGACT
AGGAGACTCGATCGCCAGCACTGTCTTTGATTTGCAGCTGGGGGACTACA
AGCAGCGGGTGCTAATTCGAGACCTGGATCGCGATCCTGGTACGGCCATG
CCTATTGCCGTGAACTTTCTCCGGTATCGACCCGGCTATCCCGTGAAGGT
CCCCGTCTGCTTCATCAACGAAGAGCTGTGCCTGCCTCTAAAACGGGGCG
GCATGCTGTTGAGCATAAACCGCTTCATTCGTGTGTCGTGCGAAGGAGAA
ACACTTCCCGAGATGCTGCTGGTGGACCTGACAGGGGCGAAGAGCGGTCA
AAAGATCGGTCTGGAACGCGTGACCTTTCCCCCCTCTGTGCAGCCCCACG
AGGTCCAGGAGGACTTCGTTTTGGGGGTCGTAAAGGGGAAAAATATCGTC
ACGTCTGAGGTTGGTACGGGTGAGACAGACACCGCCTCTGAGACCACGTG
ACTTGGAAAGGGTAGGTCGTGAGGGTTTAGGGCCGTGTGCACGGTAGCGT
AGAAGCAAATGCCTGCTTGTGGCATGGCTCGCGAGCAATAAGCATGAAAG
ACCTCAATCCCAATTAAATCAGAAGTCGCTTTGCGCATTTCGATTTTT back to topprotein sequence of rna3149 >rna3149-protein ID=rna3149-protein|Name=rna3149|organism=Nannochloropsis gaditana|type=polypeptide|length=1074bp
MLRRNPAKRTLARDILRMTSRRLVVRAMPAPAFSKVARGSQGRSVPPFSI
FSMFPPIGPQGCPFHVSALWISGSQSATNTLGGIRALLIDRRRPSRVQDE
RFPASRFFLPQECPHVFLHPRHLPPATSSLPFSGAGAWVRPFSSQPAPKR
DPKREEASKAAPVSGSHVAPASPSSSSTSAATNAQAPPRYVEEGIKPEDL
KPAQGVEDPRKEENSPATVAGILKRYTMKAFHGLQILPAAIFSFTVTAGR
WMITFVVETVKNPSSLRDRWLHLKKVVVEEFHHYKLGSKVLWSDIKTSSS
IVSRVLHGNTLSRRERRQLTRTTADLFRLVPFAFFVIVPFMELLLPFALK
IFPNMLPSTFQDNLKKEENLKRELKVRLALAGFLKDTLGEIASKKKGQGE
GEGKESPNAALLTEFVEKARAGTHISTNDINRFARLFKDELTLDNMSRPQ
LAGMCVYMGLRPYGSDNFLRFQLRAKLRNLKEDDQRIVWEGVDNMNKAEL
REACRERGMRAYGLTQLGYRRQLQQWLDLSINKEVPISLLILSRAFTLDS
KFTDPAAAVADSISSLDEDVVNEVLLDVATRSELQNPDLRARKLESIERQ
NELIEEERKREEGRKKKAEEEKKKAEEEKKKAEKAEEEKKKAEQEAAADT
TAASAPGKEMEDVKLADPATEQIKEAVAHASAMTGSSPAEGVNPPPPPPA
ESFSPVKVLTENEVVSTAKPSLDEDAARQASGTSSAAPAPASSILSTDST
ALEGVGEKEASEADRKEGEKRELTAAEIAALRTLLKESSVEQEKTVLAQL
KAELQASPSAKVEAVLAAVKGELQDAGKEVTGAGGADAGKATLGAGAGAG
PEKTQPAFSSEKTSDLDLTLPPPSSSAENVPDAAQALAASTAPGAQEAPP
ITSGSPTSSPSPAPGKAEGSPPASPAPEPPSSAMDKALERMRMKVASMLD
KLEVDMEKVESTIGDKLHMLDKDKDGVLTTAELSEVISHVLKRHTSEEEA
QKIASTVDKDADGILTVQELMEWIEHREELLQELGEEENNASSASATVPK
KTPTPPGIGERSSGTAGGGGGEST back to topmRNA from alignment at CM002460.1:849233..852970- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3149 ID=rna3149|Name=rna3149|organism=Nannochloropsis gaditana|type=mRNA|length=3738bp|location=Sequence derived from alignment at CM002460.1:849233..852970- (Nannochloropsis gaditana)
GGCGTCAAGACCAGGCGTTCTCCCAAGCAATTACCACCATCACGATATTA
ACACTTCCCCGTCTTTCTCCTCTCGTCACTCGCACTATTCATGCAGGAAA
AGACATCTCGCCACGTGTTCCAGTGCGTGCATGCCAGGGGAAACGGCGGA
CGCCAGTTTTGGGGTCTAGGCGTGTAGCCGCGTGAACATTTCCAAGTCGA
GCCATGCTTCGACGGAACCCTGCCAAAAGGACCCTGGCACGTGATATCTT
GCGGATGACCTCCAGGCGCCTGGTCGTTCGTGCCATGCCAGCCCCGGCCT
TCAGCAAGGTGGCCAGGGGGTCCCAGGGCAGATCCGTGCCGCCCTTTTCC
ATCTTCAGCATGTTTCCACCCATCGGGCCTCAAGGATGTCCATTTCATGT
CTCTGCATTATGGATCTCAGGCAGTCAGTCGGCTACAAACACACTTGGAG
GGATAAGGGCCCTGTTAATTGATCGCAGGAGACCCTCTAGGGTCCAAGAT
GAGCGCTTCCCGGCCTCCAGGTTTTTCCTGCCGCAGGAATGCCCCCACGT
GTTTCTCCACCCACGTCACCTACCGCCTGCCACATCGTCCTTGCCTTTCT
CTGGAGCAGGCGCTTGGGTCCGTCCCTTCTCCTCTCAACCGGCGCCAAAG
CGAGACCCGAAACGGGAGGAGGCGTCCAAGGCCGCGCCCGTCTCGGGCAG
CCATGTTGCCCCAGCGTCCCCATCCTCTTCCTCGACGTCCGCTGCGACCA
ATGCCCAAGCCCCTCCACGGTACGTGGAGGAGGGCATCAAACCCGAAGAC
CTGAAGCCCGCGCAGGGCGTGGAGGACCCTCGGAAAGAGGAGAATTCGCC
GGCGACGGTGGCGGGGATCCTGAAACGCTACACCATGAAAGCATTCCACG
GCCTCCAGATCTTGCCAGCGGCAATATTTTCCTTCACCGTGACCGCGGGA
CGCTGGATGATCACTTTTGTGGTGGAGACGGTCAAGAACCCGAGTTCTTT
GCGGGACCGATGGCTGCACCTGAAGAAGGTAGTGGTGGAGGAATTCCACC
ACTACAAGCTCGGCTCCAAAGTCCTGTGGTCGGACATCAAGACCTCGTCC
TCCATCGTGAGTCGGGTCCTGCACGGGAATACGCTGAGCCGCCGGGAGCG
CCGGCAACTGACGCGGACGACGGCCGACTTGTTCCGCCTGGTCCCCTTCG
CGTTCTTCGTGATCGTGCCCTTCATGGAGCTCCTGTTGCCCTTTGCCCTG
AAAATCTTCCCGAACATGCTCCCGTCCACGTTCCAGGACAATTTGAAGAA
GGAAGAGAATCTGAAGCGCGAGCTGAAAGTGCGCTTGGCCTTGGCAGGCT
TCTTGAAGGACACGCTAGGGGAGATTGCAAGTAAGAAGAAGGGCCAGGGG
GAGGGCGAAGGGAAGGAAAGTCCCAATGCCGCCCTTCTGACGGAATTCGT
CGAGAAAGCCCGGGCAGGCACCCACATCTCCACCAACGACATCAACCGAT
TCGCCCGCCTCTTTAAGGACGAGCTCACGCTCGACAACATGTCGCGGCCG
CAGCTGGCGGGGATGTGTGTCTACATGGGCCTCCGTCCTTACGGCAGTGA
CAATTTCTTGCGCTTCCAGCTTCGAGCGAAGCTGCGGAATCTAAAGGAGG
ACGATCAGCGCATCGTCTGGGAGGGGGTGGACAACATGAACAAGGCGGAA
CTGAGGGAAGCCTGCCGGGAACGGGGCATGCGCGCCTACGGCCTGACCCA
ACTTGGGTACCGGCGGCAATTGCAGCAGTGGTTGGATTTAAGCATCAACA
AGGAGGTGCCCATTTCCCTCCTGATCCTCTCCCGGGCATTCACGCTTGAC
TCCAAATTCACGGATCCGGCCGCGGCGGTGGCGGATTCGATCAGCAGTCT
GGACGAGGACGTGGTGAACGAGGTTCTGCTCGACGTGGCGACGCGGTCAG
AGCTTCAAAACCCGGACCTCCGGGCCCGAAAATTGGAGAGCATCGAGCGT
CAAAACGAGCTGATCGAGGAGGAGCGAAAGCGGGAGGAAGGCCGGAAGAA
GAAAGCGGAGGAAGAGAAGAAGAAAGCGGAGGAAGAGAAGAAGAAAGCGG
AGAAAGCGGAGGAAGAGAAGAAGAAGGCGGAGCAGGAAGCGGCGGCCGAC
ACGACAGCCGCGTCCGCTCCAGGGAAGGAAATGGAGGACGTCAAACTCGC
GGATCCGGCTACAGAGCAGATCAAAGAGGCCGTCGCCCACGCCTCGGCGA
TGACGGGGAGCAGCCCTGCCGAGGGGGTGAACCCTCCTCCACCGCCCCCT
GCAGAGTCGTTCTCACCCGTGAAAGTCCTGACGGAGAACGAGGTGGTGAG
CACGGCGAAGCCCTCCTTGGACGAGGATGCAGCCAGGCAGGCCTCGGGAA
CCAGCTCGGCCGCCCCTGCGCCAGCATCGTCGATCCTAAGCACGGATTCC
ACGGCGCTGGAGGGGGTGGGGGAGAAGGAAGCGTCGGAAGCGGACAGGAA
GGAGGGAGAAAAGCGGGAGTTGACGGCCGCGGAGATTGCTGCCCTGCGGA
CCCTGTTGAAGGAGTCGTCCGTCGAGCAGGAGAAGACGGTTCTTGCCCAG
CTCAAAGCAGAGCTTCAGGCCTCACCCTCTGCCAAGGTAGAGGCAGTCCT
CGCCGCGGTCAAAGGGGAGCTGCAGGACGCAGGCAAGGAGGTCACTGGCG
CCGGAGGGGCGGATGCGGGGAAAGCTACCCTCGGTGCAGGCGCAGGCGCG
GGCCCGGAAAAAACACAGCCTGCTTTCTCGTCGGAAAAGACCTCAGATTT
GGATTTGACGTTGCCCCCACCGTCCTCCTCCGCCGAGAACGTTCCCGACG
CTGCACAGGCACTGGCAGCCAGCACTGCACCTGGGGCACAGGAGGCGCCT
CCGATCACGTCAGGATCACCCACGTCTTCTCCGTCGCCGGCGCCGGGGAA
GGCGGAGGGCAGTCCGCCCGCCTCGCCAGCCCCTGAGCCGCCGTCGTCTG
CCATGGACAAGGCCTTGGAGCGGATGCGGATGAAGGTTGCCTCCATGTTG
GATAAATTGGAGGTGGACATGGAAAAAGTGGAGAGCACGATTGGGGACAA
GCTGCACATGCTTGACAAGGACAAGGACGGCGTGTTGACCACGGCGGAAC
TGTCGGAGGTGATCTCCCACGTGCTGAAACGACACACCTCCGAAGAGGAG
GCACAGAAGATCGCCAGCACGGTTGACAAGGACGCCGATGGGATTTTGAC
TGTGCAGGAGCTGATGGAGTGGATCGAGCACAGGGAAGAGCTCTTGCAGG
AGCTCGGGGAGGAGGAAAACAACGCTTCTTCCGCCTCTGCCACCGTGCCG
AAGAAGACCCCGACTCCGCCGGGGATAGGGGAAAGGTCGTCAGGAACCGC
AGGTGGAGGCGGCGGGGAGTCAACATAGTTATCTATGCATCGGGTGGTTA
AAGGGAAGGTGGGGAGCGAGGCCATGGGAGCAGGAAAGTCGAATTCATGT
GGCTGGGAATCAGACTATTGGCGAAGATAGAGTCCCCTGACATCCGGTGT
CGAATATGTAGTGAAAAGTGAGCACGACAGCCTCGCTGCCATGCCTGATG
AGTCGCACGCTCTAACAGGACAAAGGAAAATGGCACGCACGCAGTGTCAC
TCGGATACACGCCAGTGTAAGGACTCTGACAGAACAAAATTATGGGGAAA
AATCGAAATGCGCAAAGCGACTTCTGATTTAATTGGGA back to topCoding sequence (CDS) from alignment at CM002460.1:849233..852970- >rna3149 ID=rna3149|Name=rna3149|organism=Nannochloropsis gaditana|type=CDS|length=3225bp|location=Sequence derived from alignment at CM002460.1:849233..852970- (Nannochloropsis gaditana)
ATGCTTCGACGGAACCCTGCCAAAAGGACCCTGGCACGTGATATCTTGCG
GATGACCTCCAGGCGCCTGGTCGTTCGTGCCATGCCAGCCCCGGCCTTCA
GCAAGGTGGCCAGGGGGTCCCAGGGCAGATCCGTGCCGCCCTTTTCCATC
TTCAGCATGTTTCCACCCATCGGGCCTCAAGGATGTCCATTTCATGTCTC
TGCATTATGGATCTCAGGCAGTCAGTCGGCTACAAACACACTTGGAGGGA
TAAGGGCCCTGTTAATTGATCGCAGGAGACCCTCTAGGGTCCAAGATGAG
CGCTTCCCGGCCTCCAGGTTTTTCCTGCCGCAGGAATGCCCCCACGTGTT
TCTCCACCCACGTCACCTACCGCCTGCCACATCGTCCTTGCCTTTCTCTG
GAGCAGGCGCTTGGGTCCGTCCCTTCTCCTCTCAACCGGCGCCAAAGCGA
GACCCGAAACGGGAGGAGGCGTCCAAGGCCGCGCCCGTCTCGGGCAGCCA
TGTTGCCCCAGCGTCCCCATCCTCTTCCTCGACGTCCGCTGCGACCAATG
CCCAAGCCCCTCCACGGTACGTGGAGGAGGGCATCAAACCCGAAGACCTG
AAGCCCGCGCAGGGCGTGGAGGACCCTCGGAAAGAGGAGAATTCGCCGGC
GACGGTGGCGGGGATCCTGAAACGCTACACCATGAAAGCATTCCACGGCC
TCCAGATCTTGCCAGCGGCAATATTTTCCTTCACCGTGACCGCGGGACGC
TGGATGATCACTTTTGTGGTGGAGACGGTCAAGAACCCGAGTTCTTTGCG
GGACCGATGGCTGCACCTGAAGAAGGTAGTGGTGGAGGAATTCCACCACT
ACAAGCTCGGCTCCAAAGTCCTGTGGTCGGACATCAAGACCTCGTCCTCC
ATCGTGAGTCGGGTCCTGCACGGGAATACGCTGAGCCGCCGGGAGCGCCG
GCAACTGACGCGGACGACGGCCGACTTGTTCCGCCTGGTCCCCTTCGCGT
TCTTCGTGATCGTGCCCTTCATGGAGCTCCTGTTGCCCTTTGCCCTGAAA
ATCTTCCCGAACATGCTCCCGTCCACGTTCCAGGACAATTTGAAGAAGGA
AGAGAATCTGAAGCGCGAGCTGAAAGTGCGCTTGGCCTTGGCAGGCTTCT
TGAAGGACACGCTAGGGGAGATTGCAAGTAAGAAGAAGGGCCAGGGGGAG
GGCGAAGGGAAGGAAAGTCCCAATGCCGCCCTTCTGACGGAATTCGTCGA
GAAAGCCCGGGCAGGCACCCACATCTCCACCAACGACATCAACCGATTCG
CCCGCCTCTTTAAGGACGAGCTCACGCTCGACAACATGTCGCGGCCGCAG
CTGGCGGGGATGTGTGTCTACATGGGCCTCCGTCCTTACGGCAGTGACAA
TTTCTTGCGCTTCCAGCTTCGAGCGAAGCTGCGGAATCTAAAGGAGGACG
ATCAGCGCATCGTCTGGGAGGGGGTGGACAACATGAACAAGGCGGAACTG
AGGGAAGCCTGCCGGGAACGGGGCATGCGCGCCTACGGCCTGACCCAACT
TGGGTACCGGCGGCAATTGCAGCAGTGGTTGGATTTAAGCATCAACAAGG
AGGTGCCCATTTCCCTCCTGATCCTCTCCCGGGCATTCACGCTTGACTCC
AAATTCACGGATCCGGCCGCGGCGGTGGCGGATTCGATCAGCAGTCTGGA
CGAGGACGTGGTGAACGAGGTTCTGCTCGACGTGGCGACGCGGTCAGAGC
TTCAAAACCCGGACCTCCGGGCCCGAAAATTGGAGAGCATCGAGCGTCAA
AACGAGCTGATCGAGGAGGAGCGAAAGCGGGAGGAAGGCCGGAAGAAGAA
AGCGGAGGAAGAGAAGAAGAAAGCGGAGGAAGAGAAGAAGAAAGCGGAGA
AAGCGGAGGAAGAGAAGAAGAAGGCGGAGCAGGAAGCGGCGGCCGACACG
ACAGCCGCGTCCGCTCCAGGGAAGGAAATGGAGGACGTCAAACTCGCGGA
TCCGGCTACAGAGCAGATCAAAGAGGCCGTCGCCCACGCCTCGGCGATGA
CGGGGAGCAGCCCTGCCGAGGGGGTGAACCCTCCTCCACCGCCCCCTGCA
GAGTCGTTCTCACCCGTGAAAGTCCTGACGGAGAACGAGGTGGTGAGCAC
GGCGAAGCCCTCCTTGGACGAGGATGCAGCCAGGCAGGCCTCGGGAACCA
GCTCGGCCGCCCCTGCGCCAGCATCGTCGATCCTAAGCACGGATTCCACG
GCGCTGGAGGGGGTGGGGGAGAAGGAAGCGTCGGAAGCGGACAGGAAGGA
GGGAGAAAAGCGGGAGTTGACGGCCGCGGAGATTGCTGCCCTGCGGACCC
TGTTGAAGGAGTCGTCCGTCGAGCAGGAGAAGACGGTTCTTGCCCAGCTC
AAAGCAGAGCTTCAGGCCTCACCCTCTGCCAAGGTAGAGGCAGTCCTCGC
CGCGGTCAAAGGGGAGCTGCAGGACGCAGGCAAGGAGGTCACTGGCGCCG
GAGGGGCGGATGCGGGGAAAGCTACCCTCGGTGCAGGCGCAGGCGCGGGC
CCGGAAAAAACACAGCCTGCTTTCTCGTCGGAAAAGACCTCAGATTTGGA
TTTGACGTTGCCCCCACCGTCCTCCTCCGCCGAGAACGTTCCCGACGCTG
CACAGGCACTGGCAGCCAGCACTGCACCTGGGGCACAGGAGGCGCCTCCG
ATCACGTCAGGATCACCCACGTCTTCTCCGTCGCCGGCGCCGGGGAAGGC
GGAGGGCAGTCCGCCCGCCTCGCCAGCCCCTGAGCCGCCGTCGTCTGCCA
TGGACAAGGCCTTGGAGCGGATGCGGATGAAGGTTGCCTCCATGTTGGAT
AAATTGGAGGTGGACATGGAAAAAGTGGAGAGCACGATTGGGGACAAGCT
GCACATGCTTGACAAGGACAAGGACGGCGTGTTGACCACGGCGGAACTGT
CGGAGGTGATCTCCCACGTGCTGAAACGACACACCTCCGAAGAGGAGGCA
CAGAAGATCGCCAGCACGGTTGACAAGGACGCCGATGGGATTTTGACTGT
GCAGGAGCTGATGGAGTGGATCGAGCACAGGGAAGAGCTCTTGCAGGAGC
TCGGGGAGGAGGAAAACAACGCTTCTTCCGCCTCTGCCACCGTGCCGAAG
AAGACCCCGACTCCGCCGGGGATAGGGGAAAGGTCGTCAGGAACCGCAGG
TGGAGGCGGCGGGGAGTCAACATAG back to top
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