rna314, rna314 (mRNA) Nannochloropsis gaditana

Overview
Namerna314
Unique Namerna314
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2725
Alignment locationCM002455.1:775413..777536 -

Link to JBrowse

Properties
Property NameValue
Productcell division protein kinase 9
Orig transcript idgnl|cribi|Naga_100026g1.10631.mrna
Orig protein idgnl|cribi|Naga_100026g1.10631
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:775413..777536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100026g1gene303Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna314rna314-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30377.1cds314Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna314 ID=rna314|Name=rna314|organism=Nannochloropsis gaditana|type=mRNA|length=2725bp
GTGTGCGGATGTGAGGGGATGACGAGCGCAAAAAACGTCCAGGCACACAA
GGGGGGTCGCCATCTTGCCATGCGCGCATCCAGCGAGGCCGGCGGGCGAG
TCCTGGCACTTATGTCCTCGAGACCCATGCCTCCATTGCGACGCCGGTCA
CCGCCTGCCTTTGGCTCCATGCATCACCCTCCCCTCGCCCTCCTAGCTCT
CCTCTTAAGCAGGCGTTGAACCTCGTTTCGTCCCTTAATTGGGTCATGCA
GTGAGACATCGTTGGCTGCGAGGACGAGGTGCAGAATTCTTGTGGGGAGC
CGTGCCGCTGGTGTCCAGCACATCATACCCCCACGTTCGGCACGGTCATT
CCGCTTTTTTGACTCGTTCTTTGCATCCATCGAGTGTGTTGCGTGCAAGG
AGGAGCGCGTCTTTTCGCCTCCTCCGCCCCCCGGGGCTGTGGCGGCAGTG
AGGCGGTATGACTTCCACGCCTCCCTCGTCTTCCGCCGGCCTCTCACCCC
CACCCACCCCGCCCGCGTCGGCTCCCGGCCTCGCAAGTGGTGTCAAGCGC
GTGTTTGTTGACGATGATGTGGGCAACGGGGTGGCACTACAGCTACTGGG
CAAGCGCATGCGGCCTCCTGAGGCAGCCGGAACTCAGATTCCGACGCAAC
GGGTATGGATGGATGTTGGTCCGGTGACAAAAATCTCTGTTCACCCGCCT
CCAATGCCGTCGTCAAGGGGCAGGGACGTGCCTGGCCCCCCTAGCGAGAG
CGGGCTGGCGCTCAAGAAAGTACCGCCACCACCACCACCCGCGCCGCCAA
TGTCGGCCATGGCGGCTTCAACAAATCCTTCAAGTGCAAAGCTGTCTCAG
GCGGTGCGAATCCAATCAGAGGGGGGGGGTGAGCCGGAGGAGGGGGATGG
TGAGCTGGAGGAGGGCGAGTTGGAGGATGGCGAGGTCGAGGAGGGGCATA
GCGCCCCGCTCGGCCTCGAAGCAGACCATTCTGTTCCTGCACGCAGGAGA
CGCCCCTCCTCCCCCACCACCCCCTCCTGCCCCGCCCAGCGCCGCACCCT
CCTCCCTAAGTCGCCCTCCCCGGCCAGCGCGGCCTCCCCCTCCCCCTCCC
CTCCCCCCCCGCGACCCTGCGCTGGGAAATTTGATAGCCGCGGATTTAAA
GGCAGCAGCACAAAAGCATCCGCAGCGGGCGGTAGCTTGCTGCTGCCTCC
GGACAAGGTGGCCCCTCTGCCCCCCTTGCTGGGGCCCCCGCCGCAGTATG
GTCGGAGCGTAGCCGCGTTCCGAAGGCGGGAGATGATCGGAAAGGGAACT
TACGGGGAAGTGTCGCGGGCGGTGGACAAAGATACTGGAGAGACCGTCGC
TCTGAAGAAAATGAGCCTCACGCTCCCCGGCGAGGCGAATCAGAAAGAGG
GGCTGGCCGTGACCGCCCTACGGGAGCTGAAGGTGCTGCAGAAGCTTAGG
CACAAGAACGTGGTGGCTTTGAAGGAGGTAGTGACCGAGCACGGCCGGTC
GCACATCCCGCACGAGGTGTACCTGGTCCTCGAGTACTGCGAGTCCGACC
TGGCGGGCATCGTCAGGACGTGCTCTCTCCTCGGCGTGCACATCCGCAGC
TACACCTACCAGATCCTGGCGGGGCTCGCCTACATCCAGCGGCACGGTCT
CCTGCACCGGGACTTGAAGACTGCCAACATTCTGGTGACTCGCAACCACC
TGGTCAAGATCGCGGACTGGGGCCTCTGCCGGTGGGAGCCGGAGCGGGAA
CGTGCCCGCCTGACGAATCCAGTGGTCACCCTGTGGTACCGGGCGCCGGA
GCTCTTGCTTGGGACGGCGAAGTACGGCAAGGCGGTGGACATGTGGTCGT
GTGGGGCCATATTTGTTGAGCTCTTGACGGGTAAGCCTTTCGTAGAGGGC
CGCGATGAGCTGGACCAGCTGGCCAGAGTCTTCGACGTCTGTGGCACGCC
CGCCTACGACGGGCAGTACACGGGTCCCCGCTTCGTGCGTCGCACTCCTC
GCTTAGCGGAGGAGCTGCGTCGGCGGGGTGTGCGGGACGAGAAAGCCATC
GCTCTTGCCGAGCAGCTTTTGGCTGTGGAGCCTAAAAAGAGGCCTTCGGC
GGACGCGGCGGCTGACGATGACTACTTCTGGAGCCCCGACGAGGCGGGCA
ATTTCCACGCTCCAAGCGATGACCCGGCCTCGCTGCCACGCCTGGTGTCC
TTCCGCTCCGGCGTAGACATGGATGACCTGCACGAATGGAACGTGAAGCG
GAGATGAGCATAGAGGTGGTCCACGACGGAGGTGGAGGAGGGAAGCTGCG
TGAGGGGTGGGAGGGCGGGGAGTGGAAGTTTGGGAGAAAGTGGTCTCGAG
GTGGCAGTGCGTTCTGCATGCCGCACAATGAAGGGCTGTGGAGATAAGAG
ATGGCAGTCGTAAGAGCACTGGCACCTGTCAGACAAGAAGTTGTACGGTT
TTGACATGAGCTTTCACTATGTAGTTGAGTGGATGCGGCGGAAGAGAGGT
AGAGTGAGCTGCCCGAAGTGCGGACTGATTGCTTTTCAAATTAAAAAGAT
GTACTTGTAGTGATGGAGGGAACATATGGGTAGAAATTGAGACAATATCC
TGCGTTTGGGCATTGGTGCGTGCGGTGTCAGCGTCAAAGAGCCGTCCGCC
TGAAATGAGGCCGAACAAGGAACGGGGAAAATGAAAGAAGTAGAAAACCA
CAAAAGAAAGCCGTCGGTCTTTACC
back to top

protein sequence of rna314

>rna314-protein ID=rna314-protein|Name=rna314|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MPFPPQVSVPPSRRPPPPPPIPRPKTKPPPPPLPDRPRKRRIECPSMNVA
KDQGIETSREKVPPPPPPRNIASQTRPVFDKTSGSGTVPGQQVSATSSPQ
IAQEQTVAPAVVIGATNMASKYEILEQIGSGTYGYVFRGRVRGSDNVVAL
KKIKLDDPRPEPQRDGFPITALREIKILSCMSHPNIVRLEEIVTSSDTNS
QNGESRSVPSSIYMVFEYCEGDLLDVLKAVREGRFQLTRDHVCSFTRQLL
EGMLYIHSNRVVHRDIKAANILVTRNCRLKIADWGLARSWRPLTEPAEAT
ADEDVGANVHHAVASARKSEKEKGSRYTDNVVTLWYRAPELLMGVSSYTT
AIDIWSIGCLVAELFLLRTLFQGRDELEQMHLIFRSCGTPAPKSWMRAPT
SRPATQTTALSSSHRPPLPARPRRLKEELAGTSGGPDGADLVDKLLALDP
SCRLTAIQALDHEFLWQDEPKDPEELPPLVPLRRMVPTAGGKG
back to top

mRNA from alignment at CM002455.1:775413..777536-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna314 ID=rna314|Name=rna314|organism=Nannochloropsis gaditana|type=mRNA|length=2124bp|location=Sequence derived from alignment at CM002455.1:775413..777536- (Nannochloropsis gaditana)
GCGAAAGACGATATATATGCCGCGTCGATGTCTCCATGCAGGCCTTTACT ACGCGGTCCCCTCGTATACATGGCCTGCATTGTGGGTTAGGCTAGTTGGT AAGCACGAGGAAAGATACAACGACAGCCATGCTTAAGCCAGGCAGGTTTG TCCACGATCAGGTTGCTTCACACTAAGACTGGGATGGTAGATCACCCGAA CGCTGGATGTGGTGACATCTCAAGGCCCGCGCGGCCCACCTTAAAGCAAC GGGACGGCTTCGTGGAACGGCTCCCGGACCGTTGAATCGGCGATAACGAC CGGCAACTTGTGCTGCCCGTGAAATCCTTCCACAAGACACTGATTTACAA TACCATCTAGGTTGGTGCGATGCCTTTCCCTCCGCAGGTGTCAGTGCCGC CGTCTCGGCGCCCTCCTCCCCCGCCTCCAATACCACGGCCGAAGACGAAG CCTCCTCCGCCTCCTCTGCCAGATCGCCCTCGCAAGAGACGAATAGAGTG TCCATCTATGAATGTAGCAAAGGATCAAGGAATCGAAACGTCTCGAGAAA AGGTGCCACCGCCTCCACCACCGAGAAATATTGCCTCTCAAACGCGTCCA GTTTTCGACAAGACGAGCGGGTCCGGTACAGTGCCAGGCCAGCAGGTGTC AGCAACAAGTTCTCCTCAAATAGCTCAAGAGCAAACCGTTGCTCCGGCGG TAGTGATTGGAGCGACAAACATGGCATCTAAATATGAAATTCTAGAGCAG ATTGGCAGTGGCACATATGGCTACGTGTTCCGAGGGCGCGTCCGGGGAAG TGACAACGTGGTCGCCTTAAAAAAGATAAAATTGGATGACCCGCGTCCCG AACCACAACGTGATGGGGTAAGGTACTTCTCGAGTAGTGCTCGTGTCCGA TGCTCATCTCTGAGTATGCAATGACGTTTCCTGACCAAAACCCGACTTTG GTCGGGTAGAGTTTGAGGGTATTTGATAACAATTTATTTTGCAAACAAGG TGGTATTTGGAGCAGAGTCATAAATATGCATCATGTCTCCTGTATCAAGC GTAACCATCGGTCATTTCATCTTTTTCCAAATTTTCAAGTTCCCAATCAC AGCCCTTCGGGAGATCAAAATCCTAAGCTGCATGTCGCATCCAAACATTG TGCGTCTGGAGGAAATCGTCACTTCGTCGGATACCAACAGCCAAAACGGA GAGAGCAGAAGTGTGCCATCCTCAATTTACATGGTGTTTGAATACTGCGA GGGGGACCTTCTCGACGTCTTAAAAGCAGTGCGTGAGGGACGCTTTCAGC TGACACGGGATCACGTCTGCTCCTTCACACGCCAGTTGCTCGAGGGCATG CTGTACATTCACTCCAATCGTGTCGTGCATCGCGATATCAAGGCCGCGAA CATTCTTGTCACGCGGAACTGTCGGCTGAAGATAGCAGATTGGGGTTTAG CCCGCTCATGGCGCCCTCTTACAGAGCCTGCCGAGGCTACTGCAGATGAA GACGTGGGGGCTAACGTGCATCACGCTGTAGCCAGCGCCAGAAAGTCCGA GAAGGAGAAGGGCAGTCGTTATACAGACAACGTTGTGACGCTATGGTATC GGGCGCCCGAGTTACTGATGGGTGTATCTAGCTACACGACCGCCATCGAC ATCTGGTCCATCGGCTGTCTCGTAGCCGAGCTCTTTCTACTGCGCACTCT CTTCCAAGGTCGCGATGAGCTCGAGCAAATGCACCTTATTTTTAGATCGT GCGGGACTCCTGCTCCGAAGAGCTGGATGAGAGCTCCCACTAGCCGCCCT GCTACTCAGACCACAGCGTTGTCCTCTTCTCATCGGCCGCCGCTCCCAGC CCGCCCTCGGCGCCTCAAGGAGGAGCTGGCGGGGACCTCGGGCGGGCCCG ATGGCGCAGACCTCGTCGACAAGCTCTTGGCCCTCGACCCCTCCTGTCGG CTGACGGCGATACAGGCGCTGGATCATGAGTTTCTCTGGCAGGACGAGCC CAAAGATCCAGAGGAGCTGCCGCCCCTTGTGCCCCTGCGGCGGATGGTCC CCACTGCAGGTGGCAAGGGGTAGGCTGGCCAGCCGGCGAGTCGATCAAAG GAAATAAACTAAATGTGGTAAAGA
back to top

Coding sequence (CDS) from alignment at CM002455.1:775413..777536-

>rna314 ID=rna314|Name=rna314|organism=Nannochloropsis gaditana|type=CDS|length=2964bp|location=Sequence derived from alignment at CM002455.1:775413..777536- (Nannochloropsis gaditana)
TTCCCAATCACAGCCCTTCGGGAGATCAAAATCCTAAGCTGCATGTCGCA
TCCAAACATTGTGCGTCTGGAGGAAATCGTCACTTCGTCGGATACCAACA
GCCAAAACGGAGAGAGCAGAAGTGTGCCATCCTCAATTTACATGGTGTTT
GAATACTGCGAGGGGGACCTTCTCGACGTCTTAAAAGCAGTGCGTGAGGG
ACGCTTTCAGCTGACACGGGATCACGTCTGCTCCTTCACACGCCAGTTGC
TCGAGGGCATGCTGTACATTCACTCCAATCGTGTCGTGCATCGCGATATC
AAGGCCGCGAACATTCTTGTCACGCGGAACTGTCGGCTGAAGATAGCAGA
TTGGGGTTTAGCCCGCTCATGGCGCCCTCTTACAGAGCCTGCCGAGGCTA
CTGCAGATGAAGACGTGGGGGCTAACGTGCATCACGCTGTAGCCAGCGCC
AGAAAGTCCGAGAAGGAGAAGGGCAGTCGTTATACAGACAACGTTGTGAC
GCTATGGTATCGGGCGCCCGAGTTACTGATGGGTGTATCTAGCTACACGA
CCGCCATCGACATCTGGTCCATCGGCTGTCTCGTAGCCGAGCTCTTTCTA
CTGCGCACTCTCTTCCAAGGTCGCGATGAGCTCGAGCAAATGCACCTTAT
TTTTAGATCGTGCGGGACTCCTGCTCCGAAGAGCTGGATGAGAGCTCCCA
CTAGCCGCCCTGCTACTCAGACCACAGCGTTGTCCTCTTCTCATCGGCCG
CCGCTCCCAGCCCGCCCTCGGCGCCTCAAGGAGGAGCTGGCGGGGACCTC
GGGCGGGCCCGATGGCGCAGACCTCGTCGACAAGCTCTTGGCCCTCGACC
CCTCCTGTCGGCTGACGGCGATACAGGCGCTGGATCATGAGTTTCTCTGG
CAGGACGAGCCCAAAGATCCAGAGGAGCTGCCGCCCCTTGTGCCCCTGCG
GCGGATGGTCCCCACTGCAGGTGGCAAGGGGTAGATGCCTTTCCCTCCGC
AGGTGTCAGTGCCGCCGTCTCGGCGCCCTCCTCCCCCGCCTCCAATACCA
CGGCCGAAGACGAAGCCTCCTCCGCCTCCTCTGCCAGATCGCCCTCGCAA
GAGACGAATAGAGTGTCCATCTATGAATGTAGCAAAGGATCAAGGAATCG
AAACGTCTCGAGAAAAGGTGCCACCGCCTCCACCACCGAGAAATATTGCC
TCTCAAACGCGTCCAGTTTTCGACAAGACGAGCGGGTCCGGTACAGTGCC
AGGCCAGCAGGTGTCAGCAACAAGTTCTCCTCAAATAGCTCAAGAGCAAA
CCGTTGCTCCGGCGGTAGTGATTGGAGCGACAAACATGGCATCTAAATAT
GAAATTCTAGAGCAGATTGGCAGTGGCACATATGGCTACGTGTTCCGAGG
GCGCGTCCGGGGAAGTGACAACGTGGTCGCCTTAAAAAAGATAAAATTGG
ATGACCCGCGTCCCGAACCACAACGTGATGGGTTCCCAATCACAGCCCTT
CGGGAGATCAAAATCCTAAGCTGCATGTCGCATCCAAACATTGTGCGTCT
GGAGGAAATCGTCACTTCGTCGGATACCAACAGCCAAAACGGAGAGAGCA
GAAGTGTGCCATCCTCAATTTACATGGTGTTTGAATACTGCGAGGGGGAC
CTTCTCGACGTCTTAAAAGCAGTGCGTGAGGGACGCTTTCAGCTGACACG
GGATCACGTCTGCTCCTTCACACGCCAGTTGCTCGAGGGCATGCTGTACA
TTCACTCCAATCGTGTCGTGCATCGCGATATCAAGGCCGCGAACATTCTT
GTCACGCGGAACTGTCGGCTGAAGATAGCAGATTGGGGTTTAGCCCGCTC
ATGGCGCCCTCTTACAGAGCCTGCCGAGGCTACTGCAGATGAAGACGTGG
GGGCTAACGTGCATCACGCTGTAGCCAGCGCCAGAAAGTCCGAGAAGGAG
AAGGGCAGTCGTTATACAGACAACGTTGTGACGCTATGGTATCGGGCGCC
CGAGTTACTGATGGGTGTATCTAGCTACACGACCGCCATCGACATCTGGT
CCATCGGCTGTCTCGTAGCCGAGCTCTTTCTACTGCGCACTCTCTTCCAA
GGTCGCGATGAGCTCGAGCAAATGCACCTTATTTTTAGATCGTGCGGGAC
TCCTGCTCCGAAGAGCTGGATGAGAGCTCCCACTAGCCGCCCTGCTACTC
AGACCACAGCGTTGTCCTCTTCTCATCGGCCGCCGCTCCCAGCCCGCCCT
CGGCGCCTCAAGGAGGAGCTGGCGGGGACCTCGGGCGGGCCCGATGGCGC
AGACCTCGTCGACAAGCTCTTGGCCCTCGACCCCTCCTGTCGGCTGACGG
CGATACAGGCGCTGGATCATGAGTTTCTCTGGCAGGACGAGCCCAAAGAT
CCAGAGGAGCTGCCGCCCCTTGTGCCCCTGCGGCGGATGGTCCCCACTGC
AGGTGGCAAGGGGTAGATGCCTTTCCCTCCGCAGGTGTCAGTGCCGCCGT
CTCGGCGCCCTCCTCCCCCGCCTCCAATACCACGGCCGAAGACGAAGCCT
CCTCCGCCTCCTCTGCCAGATCGCCCTCGCAAGAGACGAATAGAGTGTCC
ATCTATGAATGTAGCAAAGGATCAAGGAATCGAAACGTCTCGAGAAAAGG
TGCCACCGCCTCCACCACCGAGAAATATTGCCTCTCAAACGCGTCCAGTT
TTCGACAAGACGAGCGGGTCCGGTACAGTGCCAGGCCAGCAGGTGTCAGC
AACAAGTTCTCCTCAAATAGCTCAAGAGCAAACCGTTGCTCCGGCGGTAG
TGATTGGAGCGACAAACATGGCATCTAAATATGAAATTCTAGAGCAGATT
GGCAGTGGCACATATGGCTACGTGTTCCGAGGGCGCGTCCGGGGAAGTGA
CAACGTGGTCGCCTTAAAAAAGATAAAATTGGATGACCCGCGTCCCGAAC
CACAACGTGATGGG
back to top
Synonyms
Publications