rna3137, rna3137 (mRNA) Nannochloropsis gaditana

Overview
Namerna3137
Unique Namerna3137
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1359
Alignment locationCM002460.1:817322..818793 -

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Properties
Property NameValue
Productn-alpha-acetyltransferase catalytic subunit
Orig transcript idgnl|cribi|Naga_100015g22.6366.mrna
Orig protein idgnl|cribi|Naga_100015g22.6366
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:817322..818793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100015g22gene3015Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3137rna3137-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27550.1cds3129Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3137 ID=rna3137|Name=rna3137|organism=Nannochloropsis gaditana|type=mRNA|length=1359bp
AGCGCACATTATGCCTCTAAAAGGCAGGCCGAGCCGATGAAGTGGTGCAC
AAATGATTTCCGTCCATGATTCAATCAAATGAAATAACCTTTCGTGACTC
TTTGCTCGTCTTACTGAGAATTTATCCTCCATGAAGGTCTTTCGTACCGC
AATGTCGTCAGTCGTCGGACATGACGGAGCCCTACTCTTAGGACCCCCTG
TCAGGTCTTTTACTGACACATCCATTTTCACCTCTTATCAATAATAAAAG
CAGATATGCCGTATTTAAAAAGCAACTGGTCATCCATGCCACCCTTGGAA
GAATTTGGGCGTTTTGCTTTTGGTGAGATTTTTACCATCCCTGAGATGAC
CTTGACACAGACGGACCCTACGGCACGGGCGTGCTACTTGCACGTGGCCT
TAGAACATCAGGCCCGCGTTCAGGAATTAGATCTTATCTGTGCAGCACCA
ACAATAGTTGTAAACCTTATGAGGGGAAAATCCACGACGGGAATGAGCTA
TACATACCTGACCACTCTCAAGGGCCAAACTTCGGAGGAGTATCCTGGCC
TCTTTGCCTTTCGCATAGATGCATCGCTCCTTTCCCATGTCGAGGTATGG
CAACTTCAAATTAAATTTTTATTCCCACGTGTTGGGGAAAAATCGTTATT
GATCAAAAAGGTGAGCGTTATTGTGGAGGATCAGGCGAAGAAACGGGGAG
AGCTGAACATGAAAGCCGAGACGGGTGCGGGCAAGCGAGGCGTTTTGGAT
AGGACCAATTCCACGGCAATCCAGAACTATAATCCACAGCAACAACGGCA
GTATTATCCTCCGCCTGTGCCTCCGCAACCATTCAACGCGGAGAGCGCTG
TAATGGTAGGTCTCGTAGTAGTCGATCAGGTTTTGGGTGTCATGACCAAA
GAAATTCAGGACAACCTGGAATCGACCTGCCGCGGTGTGGAAAAGCGTCT
GCTAGCGGATTTGAAAAGACTGGAGGGGAAAATGCGACGAATTGAGGAAG
TCTATGATGATATTGCGGCGGACATCCGGCTAACGTCACTACAGTCCGCT
CTTGAGGAAGCGCGAATGGCACAAGGCTTGGCCGCGAATGATCCAGAAAA
GAAGTCGGCCACAGATGCGGACGGTGGAAACGAGGATCAGGAAGAGGGTG
ATCCAGGTGGGGTATGGGGAACAGGGGCATTGCAGCAAGACATATACTAC
GGCATAGGCGTGGGTGTGTGAGGGCGGCGATGTTGGGAGCTTCGCAAAGG
GGGCGTTAGCTGCAACAGATGCATTGAAAGCTGGCATATTTAGGCCGCAG
TCAGATTGCGAAGCATAACAGATCCCAAAAGAAACACGAAGCACGACCAA
AGTGATCAT
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protein sequence of rna3137

>rna3137-protein ID=rna3137-protein|Name=rna3137|organism=Nannochloropsis gaditana|type=polypeptide|length=308bp
MLESIQHNREQKNESSLEARIKYVGYSSEKQLGAIMALVDRDLSEPYSIF
TYRYFLCGWPDLCFLAYIDDDASSKAVAGDQYSLKKASAESMDRDEYNEH
RTLVGVIVGKADNEGSQDSKGLCGYIAMLAVETSYRRAGIGRKLVSRAVA
RMVEIGCQEVALEAEVTNIGALHLYERQGFAREERLLKYYLNGVDAFRLK
LWLKMEDDFIMPHDGRQSMHESGQCCGGKNDQHNEQRHPHGDKKAVLAHG
IEANDSPTGPPNCSGGREEDIDGNIMVTRQNLTSLSLEGRHVHPQRSDAV
EPSRWQER
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mRNA from alignment at CM002460.1:817322..818793-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3137 ID=rna3137|Name=rna3137|organism=Nannochloropsis gaditana|type=mRNA|length=1472bp|location=Sequence derived from alignment at CM002460.1:817322..818793- (Nannochloropsis gaditana)
CCCTCTTTCACTCAGAGGGGGATTCTTCTTTTAGTGGAGGATTAGAGGAA
TTGCTGCGAAGATTTGATGTGTTGGAGATTGCTTGCTAAGAGATCGCATC
GACCGGTCATTGACTTCTCCGCGGCGCACGTTTTGTGTCCCATCATCAGT
AAGCACCATCACGGGCACAACCACCACAGGTGCTACTCGATACGCCGACG
GGAATAAAGTGATGTTGGAAAGCATACAACATAATCGAGAGCAAAAAAAT
GAGTCAAGGTGAGTGCGGCATCAGTCTTCGGCAGATGTCGCTCTAGCCCT
GATCCCCTCCTCCCGCTAACACACAGCTTGGAAGCCCGCATTAAATATGT
CGGCTACTCAAGCGAAAAACAGCTTGGCGCTATCATGGCATTGGTAGATC
GAGATTTGTCGGAGCCATACTCCATTTTTACGTACAGATATTTTCTCTGC
GGTTGGCCAGACCTGTGCTTTCTTGCGTACATCGACGACGACGCCTCATC
AAAAGCTGTTGCAGGTGACCAATATTCTTTGAAAAAAGCTTCCGCAGAGA
GCATGGATAGGGATGAATATAATGAACACCGGACACTGGTGGGTGTCATT
GTGGGCAAAGCAGATAACGAGGGAAGTCAGGACTCAAAGGGTTTGTGTGG
GTACATTGCCATGCTGGCTGTTGAGACCTCATACCGAAGGGCAGGCATCG
GTGCGTATCTTTAACGCCGTATGTTTTTTTGGGGGTGTGTGCTTTGTATG
GAAAGGAGTTTCGTCTTTCGACCAACATATCTTGCGTATAATAGGGCGTC
ACCTTTTTTTGAGCAATTTTCGGGCAAGCAATTTCGTGGCAGATGCTCAC
AATAAACATGCTTTATCAAATCTTATAACCTCTATCCTTCCTTACTTGAT
ACTAGGTCGGAAGCTCGTTAGCAGAGCAGTGGCACGCATGGTAGAAATCG
GCTGTCAAGAGGTAGCGCTTGAAGCGGAAGTTACCAATATTGGGGCCCTG
CACTTGTACGAACGGCAAGGGTTTGCAAGAGAAGAGCGTTTATTGAAATA
CTACTTGAATGGCGTGGATGCATTTCGTCTGAAATTGTGGTTGAAAATGG
AAGATGATTTCATAATGCCGCACGATGGTCGTCAATCAATGCATGAGAGT
GGACAGTGCTGCGGTGGAAAGAATGACCAGCATAACGAGCAAAGACATCC
TCATGGAGACAAAAAAGCTGTCTTAGCACATGGTATTGAAGCTAACGACT
CTCCTACGGGGCCGCCGAATTGTTCCGGCGGACGCGAGGAGGATATTGAC
GGAAATATTATGGTAACGAGGCAGAATTTGACATCACTCAGCCTAGAGGG
CCGGCATGTACACCCTCAAAGATCGGATGCAGTAGAACCATCAAGATGGC
AGGAGAGATAAAAAAATGTATTGAAATGCGAAAAATTGTACAATGTAACA
TAACAGATGAGCTGATTCCTGA
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Coding sequence (CDS) from alignment at CM002460.1:817322..818793-

>rna3137 ID=rna3137|Name=rna3137|organism=Nannochloropsis gaditana|type=CDS|length=2781bp|location=Sequence derived from alignment at CM002460.1:817322..818793- (Nannochloropsis gaditana)
GTCGGAAGCTCGTTAGCAGAGCAGTGGCACGCATGGTAGAAATCGGCTGT
CAAGAGGTAGCGCTTGAAGCGGAAGTTACCAATATTGGGGCCCTGCACTT
GTACGAACGGCAAGGGTTTGCAAGAGAAGAGCGTTTATTGAAATACTACT
TGAATGGCGTGGATGCATTTCGTCTGAAATTGTGGTTGAAAATGGAAGAT
GATTTCATAATGCCGCACGATGGTCGTCAATCAATGCATGAGAGTGGACA
GTGCTGCGGTGGAAAGAATGACCAGCATAACGAGCAAAGACATCCTCATG
GAGACAAAAAAGCTGTCTTAGCACATGGTATTGAAGCTAACGACTCTCCT
ACGGGGCCGCCGAATTGTTCCGGCGGACGCGAGGAGGATATTGACGGAAA
TATTATGGTAACGAGGCAGAATTTGACATCACTCAGCCTAGAGGGCCGGC
ATGTACACCCTCAAAGATCGGATGCAGTAGAACCATCAAGATGGCAGGAG
AGATAACTTGGAAGCCCGCATTAAATATGTCGGCTACTCAAGCGAAAAAC
AGCTTGGCGCTATCATGGCATTGGTAGATCGAGATTTGTCGGAGCCATAC
TCCATTTTTACGTACAGATATTTTCTCTGCGGTTGGCCAGACCTGTGCTT
TCTTGCGTACATCGACGACGACGCCTCATCAAAAGCTGTTGCAGGTGACC
AATATTCTTTGAAAAAAGCTTCCGCAGAGAGCATGGATAGGGATGAATAT
AATGAACACCGGACACTGGTGGGTGTCATTGTGGGCAAAGCAGATAACGA
GGGAAGTCAGGACTCAAAGGGTTTGTGTGGGTACATTGCCATGCTGGCTG
TTGAGACCTCATACCGAAGGGCAGGCATCGATGTTGGAAAGCATACAACA
TAATCGAGAGCAAAAAAATGAGTCAAGGTCGGAAGCTCGTTAGCAGAGCA
GTGGCACGCATGGTAGAAATCGGCTGTCAAGAGGTAGCGCTTGAAGCGGA
AGTTACCAATATTGGGGCCCTGCACTTGTACGAACGGCAAGGGTTTGCAA
GAGAAGAGCGTTTATTGAAATACTACTTGAATGGCGTGGATGCATTTCGT
CTGAAATTGTGGTTGAAAATGGAAGATGATTTCATAATGCCGCACGATGG
TCGTCAATCAATGCATGAGAGTGGACAGTGCTGCGGTGGAAAGAATGACC
AGCATAACGAGCAAAGACATCCTCATGGAGACAAAAAAGCTGTCTTAGCA
CATGGTATTGAAGCTAACGACTCTCCTACGGGGCCGCCGAATTGTTCCGG
CGGACGCGAGGAGGATATTGACGGAAATATTATGGTAACGAGGCAGAATT
TGACATCACTCAGCCTAGAGGGCCGGCATGTACACCCTCAAAGATCGGAT
GCAGTAGAACCATCAAGATGGCAGGAGAGATAACTTGGAAGCCCGCATTA
AATATGTCGGCTACTCAAGCGAAAAACAGCTTGGCGCTATCATGGCATTG
GTAGATCGAGATTTGTCGGAGCCATACTCCATTTTTACGTACAGATATTT
TCTCTGCGGTTGGCCAGACCTGTGCTTTCTTGCGTACATCGACGACGACG
CCTCATCAAAAGCTGTTGCAGGTGACCAATATTCTTTGAAAAAAGCTTCC
GCAGAGAGCATGGATAGGGATGAATATAATGAACACCGGACACTGGTGGG
TGTCATTGTGGGCAAAGCAGATAACGAGGGAAGTCAGGACTCAAAGGGTT
TGTGTGGGTACATTGCCATGCTGGCTGTTGAGACCTCATACCGAAGGGCA
GGCATCGATGTTGGAAAGCATACAACATAATCGAGAGCAAAAAAATGAGT
CAAGGTCGGAAGCTCGTTAGCAGAGCAGTGGCACGCATGGTAGAAATCGG
CTGTCAAGAGGTAGCGCTTGAAGCGGAAGTTACCAATATTGGGGCCCTGC
ACTTGTACGAACGGCAAGGGTTTGCAAGAGAAGAGCGTTTATTGAAATAC
TACTTGAATGGCGTGGATGCATTTCGTCTGAAATTGTGGTTGAAAATGGA
AGATGATTTCATAATGCCGCACGATGGTCGTCAATCAATGCATGAGAGTG
GACAGTGCTGCGGTGGAAAGAATGACCAGCATAACGAGCAAAGACATCCT
CATGGAGACAAAAAAGCTGTCTTAGCACATGGTATTGAAGCTAACGACTC
TCCTACGGGGCCGCCGAATTGTTCCGGCGGACGCGAGGAGGATATTGACG
GAAATATTATGGTAACGAGGCAGAATTTGACATCACTCAGCCTAGAGGGC
CGGCATGTACACCCTCAAAGATCGGATGCAGTAGAACCATCAAGATGGCA
GGAGAGATAACTTGGAAGCCCGCATTAAATATGTCGGCTACTCAAGCGAA
AAACAGCTTGGCGCTATCATGGCATTGGTAGATCGAGATTTGTCGGAGCC
ATACTCCATTTTTACGTACAGATATTTTCTCTGCGGTTGGCCAGACCTGT
GCTTTCTTGCGTACATCGACGACGACGCCTCATCAAAAGCTGTTGCAGGT
GACCAATATTCTTTGAAAAAAGCTTCCGCAGAGAGCATGGATAGGGATGA
ATATAATGAACACCGGACACTGGTGGGTGTCATTGTGGGCAAAGCAGATA
ACGAGGGAAGTCAGGACTCAAAGGGTTTGTGTGGGTACATTGCCATGCTG
GCTGTTGAGACCTCATACCGAAGGGCAGGCATCGATGTTGGAAAGCATAC
AACATAATCGAGAGCAAAAAAATGAGTCAAG
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Synonyms
Publications