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Properties
| Property Name | Value |
|---|
| Product | zinc dhhc domain containing 3 |
| Orig transcript id | gnl|cribi|Naga_100015g33.6404.mrna |
| Orig protein id | gnl|cribi|Naga_100015g33.6404 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:782008..783805 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3126 ID=rna3126|Name=rna3126|organism=Nannochloropsis gaditana|type=mRNA|length=330bp
ATGCTGTTTTCTACGGCATTTCGACGCATGCCTGTCCAGCGGCTGGCAAT
GGCGGGGAATGGTCGGCGTGGTCTTGCTACGGCCAGTCCAGGAGGCAGCG
GGGCGTTCGTGCATACGCTGTACAGGAATGTGTTCCGCAGCAACATTGCC
TATTTGACTTACGTCTTCGCAGGAGCCATTGTTGTGGAGTGGGTGTACTC
GAAAGGCATCGATACGGCCTGGGAAATAAGTAACAGAGGGAAACTCTTCC
ATCAAGTAGACTGGACAAAGTGGCACTTTCACCTGGACGAGGAGGAAGAG
GAAGAGGAAGAGGAGGAGGAGGACGAATAG back to topprotein sequence of rna3126 >rna3126-protein ID=rna3126-protein|Name=rna3126|organism=Nannochloropsis gaditana|type=polypeptide|length=451bp
MGPQSSRGAQKEGCGTGHNVLWWCNQDPCGVVCAGVTWSLILYAQYTINK
IVIFGWMGVLSLWGFLNVTAFNATACLAIISHVRAMTTDPGAVPRNALPL
ADDPEVQANGQEGTGTNGVAMDEGRLSGSHDGVLGNAGMGGNPRARVRKF
CRRCNAFKPPRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKLFLLFIFY
VFIMCTYALTLVLVRYAGCIGEEDAEGCDDMAGNLLVVFLVMEAVLFGLF
TCCMMLDQWTVVSTNTTAIDRLKGQYHAVSTSVGRADVNEVFGGKEGRRI
RWHWLWPSAAHFPGSVLSDLLGYRVEDGEGMALEEGRSEEARDAEECREA
DEESGILLLDRRRRASSSSREDMVGPVTVFEDSLPPSIHGTGATHRSNWS
SRASMPSKRVPTQASRGKGQGLEGMSAGEVGAPLSEGPPERFGVLWHPGS
A back to topmRNA from alignment at CM002460.1:782008..783805+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3126 ID=rna3126|Name=rna3126|organism=Nannochloropsis gaditana|type=mRNA|length=1798bp|location=Sequence derived from alignment at CM002460.1:782008..783805+ (Nannochloropsis gaditana)
GACATGTGCAAGAGAGATCCTGCATGTCCGTAGGCACAGAGTCTGGCTTT
CTGTGCTTAAGATCGTGCGGCGATTGCATCACTTATCTCGtggccccttt
ccctgctcACTTTTTGATTTTTCTCATCTGAAAATTACACCATAGGGACG
ACAGCAGTGGGCAAAATGTCTCCGCAAGGCACATTGCTGGGATTGTAACA
CTGTAGCAAAGAACATTATGGGACCCCAATCTTCACGAGGAGCCCAAAAA
GAGGGATGCGGGACTGGACACAACGTGCTTTGGTGGTGCAACCAGGACCC
GTGTGGAGTGGTGTGTGCCGGCGTGACCTGGAGTTTGATATTGTACGCTC
AGTACACCATCAATAAGATAGTGATATTCGGGTGGATGGGCGTGCTATCT
CTATGGGGTTTTCTAAACGTAACTGCCTTCAATGCCACAGCCTGCCTGGC
TATAATTTCCCATGTCCGGGCCATGACGACAGACCCCGGCGCAGTGCCTC
GAAACGCACTCCCGCTGGCTGATGACCCGGAGGTGCAGGCAAACGGACAG
GAAGGGACCGGCACCAATGGTGTCGCCATGGATGAAGGAAGACTCTCTGG
ATCCCATGATGGGGTCCTGGGTAATGCAGGCATGGGAGGCAATCCCCGAG
CGCGCGTTCGCAAGTTTTGCCGTCGGTGTAATGCATTCAAGCCCCCGCGC
GCTCACCATTGCAGCATTTGTCGTCGTTGCGTGGTCAAAATGGACCACCA
CTGCCCTTGGGTCAACAACTGCGTGGGCATCGGGAACCACAAgctcttct
tgctcttcATCTTCTACGTCTTCATCATGTGTACCTACGCCTTGACGCTT
GTGCTGGTCAGGTACGCGGGATGTatcggagaggaggacgccgaaggCTG
CGACGATATGGCCGGGAATTTGTTGGTGGTGTTCCTGGTGATGGAGGCAG
TCCTCTTCGGCCTTTTCACTTGCTGCATGATGCTCGATCAGTGGACGGTT
GTCTCTACAAATACGACGGCCATCGACCGCTTAAAGGGCCAGTACCACGC
CGTATCGACCTCCGTGGGTAGAGCTGACGTGAACGAGGTGTtcgggggca
aggagggcaggaggatcCGGTGGCACTGGTTGTGGCCGTCGGCGGCCCAC
TTTCCCGGCTCGGTGTTGAGCGATTTGTTGGGGTACAGGGTAGAAGACGG
CGAGGGCAtggccctggaggaaggcagaagcgaggaagcgcgggacgcgg
aggaatgccgggaggcggacgaggagtcTGGCATCCTCCTGCTTGATCGA
CGCCGACGGGCCAGCTCGAGCTCACGGGAAGACATGGTGGGTCCGGTGAC
TGTCTTCGAGGACTCGCTCCCTCCAAGTATCCACGGTACCGGAGCTACCC
ATCGGAGCAACTGGAGCAGCCGCGCATCCATGCCCAGCAAGCGCGTCCCA
ACCCAGGCGAGCAGAGGCAAAGGACAAGGGCTCGAGGGAATGAGCGCGGG
AGAGGTGGGAGCGCCTCTCTCGGAGGGGCCGCCGGAGCGCTTTGGCGTCT
TGTGGCATCCAGGATCGGCGTGATAGTAGCTTTAAGGGGAGGGATAGGGT
ATATCTTGGAATGTATAGTGTACCGGGTTGATTTGAGATGTAAACAAGTC
AGCGCATTGCGACCGTGTCTTGACGAACGTGTTGGTAGGAGAAGGCTTTT
AACAAAAAACAGATAAAGCATATCGGCGAGGACTGAAGGCCCCCGAAAGC
GAAATACCTTTATCATGCATGGCATACAGTTATTTTCAAGTATCGTTC back to topCoding sequence (CDS) from alignment at CM002460.1:782008..783805+ >rna3126 ID=rna3126|Name=rna3126|organism=Nannochloropsis gaditana|type=CDS|length=1356bp|location=Sequence derived from alignment at CM002460.1:782008..783805+ (Nannochloropsis gaditana)
ATGGGACCCCAATCTTCACGAGGAGCCCAAAAAGAGGGATGCGGGACTGG
ACACAACGTGCTTTGGTGGTGCAACCAGGACCCGTGTGGAGTGGTGTGTG
CCGGCGTGACCTGGAGTTTGATATTGTACGCTCAGTACACCATCAATAAG
ATAGTGATATTCGGGTGGATGGGCGTGCTATCTCTATGGGGTTTTCTAAA
CGTAACTGCCTTCAATGCCACAGCCTGCCTGGCTATAATTTCCCATGTCC
GGGCCATGACGACAGACCCCGGCGCAGTGCCTCGAAACGCACTCCCGCTG
GCTGATGACCCGGAGGTGCAGGCAAACGGACAGGAAGGGACCGGCACCAA
TGGTGTCGCCATGGATGAAGGAAGACTCTCTGGATCCCATGATGGGGTCC
TGGGTAATGCAGGCATGGGAGGCAATCCCCGAGCGCGCGTTCGCAAGTTT
TGCCGTCGGTGTAATGCATTCAAGCCCCCGCGCGCTCACCATTGCAGCAT
TTGTCGTCGTTGCGTGGTCAAAATGGACCACCACTGCCCTTGGGTCAACA
ACTGCGTGGGCATCGGGAACCACAAgctcttcttgctcttcATCTTCTAC
GTCTTCATCATGTGTACCTACGCCTTGACGCTTGTGCTGGTCAGGTACGC
GGGATGTatcggagaggaggacgccgaaggCTGCGACGATATGGCCGGGA
ATTTGTTGGTGGTGTTCCTGGTGATGGAGGCAGTCCTCTTCGGCCTTTTC
ACTTGCTGCATGATGCTCGATCAGTGGACGGTTGTCTCTACAAATACGAC
GGCCATCGACCGCTTAAAGGGCCAGTACCACGCCGTATCGACCTCCGTGG
GTAGAGCTGACGTGAACGAGGTGTtcgggggcaaggagggcaggaggatc
CGGTGGCACTGGTTGTGGCCGTCGGCGGCCCACTTTCCCGGCTCGGTGTT
GAGCGATTTGTTGGGGTACAGGGTAGAAGACGGCGAGGGCAtggccctgg
aggaaggcagaagcgaggaagcgcgggacgcggaggaatgccgggaggcg
gacgaggagtcTGGCATCCTCCTGCTTGATCGACGCCGACGGGCCAGCTC
GAGCTCACGGGAAGACATGGTGGGTCCGGTGACTGTCTTCGAGGACTCGC
TCCCTCCAAGTATCCACGGTACCGGAGCTACCCATCGGAGCAACTGGAGC
AGCCGCGCATCCATGCCCAGCAAGCGCGTCCCAACCCAGGCGAGCAGAGG
CAAAGGACAAGGGCTCGAGGGAATGAGCGCGGGAGAGGTGGGAGCGCCTC
TCTCGGAGGGGCCGCCGGAGCGCTTTGGCGTCTTGTGGCATCCAGGATCG
GCGTGA back to top
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