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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100015g41.6371.mrna |
| Orig protein id | gnl|cribi|Naga_100015g41.6371 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:764616..767407 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3120 ID=rna3120|Name=rna3120|organism=Nannochloropsis gaditana|type=mRNA|length=336bp
ATGGTCCATGTGCGGCATTTGAGCGGACGGCAACGTGATAGATTCTGTGC
ATTTAGTTGTGCTGGAGAAGGTCAAGAACGGAGGAAGGAAAAGAATCTTT
CTTCTGACTTTCAACCAGAAAAACAAGAACTTCCAATCATCAGTGTTGAT
GTAGTTACTGTGATAGTGACAAGAAAGTCATGGCATGAGTTTACGCTCTC
TTTTGGTGACACGACGCGCAGGAGAAACAAACGACTTCGAGAGCAAAGCG
AAGAATCGGAAGACACCAAAATTACATTTCAGATTGTGTATTATTACTTT
GATTGGCTTGTTGTTCTTTCTATGAGTACTTTTTAA back to topprotein sequence of rna3120 >rna3120-protein ID=rna3120-protein|Name=rna3120|organism=Nannochloropsis gaditana|type=polypeptide|length=514bp
MCLFCSKSALTLRPSFDPRNFFPRLDTRTHALTIHSLLMGFMNECHISHP
DSAVVLLIEAAQYFIEAPVFEVPGAFNTSHRCTAGRQASFLTCSGASTAP
RCDKMHGDNLLRSTRCNTSLEHHQGGGDGQPLDWSTSLASSFSSLSQSSR
SFRTSNHHDVCHDGHNHCRYSSSSSDSSTSSCSSLGHNAEPSPFAALTDT
VSGVMDSVQTARKHPVLATVLWLLGGSVEQKEARAGPKGPSSSLAGSAST
SSRSSGNNDEDYICNDENNTVGKSSAPKNNPRQPCLADNMLARSRHPQTG
NADDEDKDGRQPDIHRLRWTAGAATGTTPPKTKVKDRVIYFLEGGRPSSA
VPGLAPPSGNRSFQGGRLGGENGGTIAVERITHMDRLEEDDLGEPRRGRE
RERGKGARVYDQENATCASTAQRQLEHYNNRCGECSPGIPPELAGSGAAG
NDPDVSPQWGWYVALTPPKPEFFQAGNNGAGLGGHHHHHHHHHHHRGHRH
HPPRVPEPLRPAMT back to topmRNA from alignment at CM002460.1:764616..767407+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3120 ID=rna3120|Name=rna3120|organism=Nannochloropsis gaditana|type=mRNA|length=2792bp|location=Sequence derived from alignment at CM002460.1:764616..767407+ (Nannochloropsis gaditana)
GTGATGAGGCAATTACCGAAATGTGGGCTGCACGAAACATCGACATGAAG
TTTCGCGTTTGCTTTTGTTTCCTCAGGAATAAGGGTAGAGGTCATATGGC
CAGCAGAAGGCAGGAATGTGTCTGTTCTGCTCGAAATCAGCACTGACACT
TCGCCCCTCATTCGACCCTCGAAACTTTTTTCCGCGGCTGGACACTCGTA
CGCACGCACTCACCATACACTCCTTGCTCATGGGCTTCATGAATGAATGT
CACATATCTCATCCAGATTCTGCTGTGGTCCTTTTAATTGAGGCTGCACA
GTACTTCATAGAAGCGCCTGTTTTTGAAGTGCCCGGGGCTTTTAACACCT
CTCACCGATGCACTGCTGGGAGGCAAgcgtccttcctcacctGCTCTGGG
GCATCCACGGCTCCTCGCTGCGATAAAATGCACGGTGACAATCTGCTTCG
GAGCACACGCTGTAATACTAGCTTAGAACATCATcaaggcggcggggacg
gccaGCCTCTGGATTGGAGCACCAGCCTTGCCTCTtcgttctcttccctc
tcccagtcGTCGCGCTCTTTTCGCACATCCAATCACCACGACGTCTGCCA
CGACGGTCACAATCATTGCCGATACAGCAGCTCTAGTAGTGACAGCAGTA
CCAGTAGCTGTTCGTCTCTTGGTCATAACGCAgagccctctcctttcgca
GCCCTCACTGATACGGTCTCAGGGGTGATGGATAGTAAGTATCAGCTGAT
GGGACGCTTTCTCCTGGCACTTGCCGCTTCGAACCCCACCTGACGCTTGA
ATGTCTCACAATTAACTTTCGGTATTTCTCTGCAGGCGTTCAGACAGCGC
GGAAGCATCCTGTCCTTGCCACGGTTCTGTGGTTGTTGGGCGGGTCGGTG
GAGCAGAAAGAAGCCAGAGCAGGCCCCAAAGGGCCCTCTTCATCGCTAGC
GGGCTCGGCTAGTACCAGCTCCCGCTCTTCGGGCAACAACGACGAAGATT
ACATTTGCAACGATGAGAACAACACTGTCGGCAAGTCTAGCGCCCCGAAG
AACAACCCGCGTCAGCCCTGCCTGGCGGACAACATGCTGGCCCGATCCCG
CCACCCGCAAACAGGCAAcgccgacgacgaggacaaggacgggcgCCAGC
CAGACATCCATCGGCTGCGCTGGACTGCGGGAGCAGCGACGGGGACAACC
CCCCCGAAGACTAAGGTTAAAGACCGCGTGATTTATTTCTTGGAGGGTGG
TcggccctcctcggccgtTCCCGGTCTGGCGCCTCCGTCGGGGAACCGCT
CTTTCCAGGGGGGCAGGCTGGGGGGCGAGAATGGTGGCACGATCGCGGTG
GAGAGGATCACGCACATGGAtagattggaggaggacgacttGGGCGAGCC
ccggagaggaagggaaagggagagaggaaaaggggccagGGTCTATGATC
AGGAGAACGCGACGTGCGCCAGTACGGCCCAACGACAGCTGGAGCACTAC
AACAATCGGTGTGGAGAGTGCTCCCCTGGCATCCCGCCCGAGCTAGCGGG
GTCGGGGGCAGCCGGCAATGATCCCGACGTGTCCCCACAGTGGGGCTGGT
ACGTGGCGCTCACGCCCCCTAAGCCGGAGTTCTTCCAGGCAGGCAACAAC
GGGGccggcctgggaggccaccaccaccatcaccaccaccatcaccacca
ccgaggCCAccgtcatcatcctcctcgcgtcCCCGAACCTTTGCGCCCGG
CCATGACATGAGGGCATAGGGCAGCGATTTGCTGAAAAGGCTTGGGCATA
ACGAATGGTGAAGCGCACAGGGGGGGCTGGTTTCTTGAGTAGTTTATGTG
GAGCGGCTTGGAAGATGACACGACTCGGAAAGAACGTGTTTAGGAGAGGT
CCTGTGAAACGGCAGCACaggagcgggaagaagacCACGTCGCATTTCTG
TGGCGATTCAAAGTAGACTTAATGATATGATAAAGCCTCCAGGCTCATAT
GTGCACGTCTGACAGAGAGGTTGCAGAGTGAACGGAAGCGAGGGTGCGGC
GAGAGCAGCTGAAGCTGCAGAGCGGCGAGAGGGATCACCACGTCAACCAA
ATCATGTGATGCACATCCCAATACACAAGCTTTCATTGTGGGGCAAACAA
CAGTACAGGGGTAAAAAAGAGTACCACGTAATAAGAAACATGTGCACGTG
AAAGGAATGATTGGGCCATGATATTTTGATAACTATGTATGGAAAGGGGG
TAGTTCAGGCACGCTGGAGTCCCCGTGGTATCAAAATGAAAAATTTTGTG
TTTTTACCGGGAAAGCTGCAGAAAATAAGAGACACGTGGAAATGAGCGAA
CACTTTTTGAGACAGGAAGATATAGGATTGGGGATATGTGCACAGACTTA
GGGGAGGAACGTACAGTGCATCGGGAAAGACGGGGGCAAAATAGTGTCTG
TCGGCTGGGCTGATCGTGGGCCAGGCCTCTCCTACATCACTATTTTTAAT
ACTTGACCTGAGGCGCGCCAAGGAACAAAGAGAGGTATtgacctctctcc
tcctcgcggcgCACATGCTAGAAAAGCACACAACGGATGGGAAAAGCCCG
TCCGGGGACAGATCTACCCGGTCACtccgcaaggccgccgcaCTGATAGC
CGCGAAAGCAACAGGGCTTGTGTAAGGCAAATATGGAGTGAAAGCTTtga
agaagggggtgtgTCCCATGATTTTTTTGTGAGGAGGGACTTCGGATAGG
GAGCAAAATAAAGAAATAAGGCTGGCAGGACAAAGGCAGACG back to topCoding sequence (CDS) from alignment at CM002460.1:764616..767407+ >rna3120 ID=rna3120|Name=rna3120|organism=Nannochloropsis gaditana|type=CDS|length=3090bp|location=Sequence derived from alignment at CM002460.1:764616..767407+ (Nannochloropsis gaditana)
ATGTGTCTGTTCTGCTCGAAATCAGCACTGACACTTCGCCCCTCATTCGA
CCCTCGAAACTTTTTTCCGCGGCTGGACACTCGTACGCACGCACTCACCA
TACACTCCTTGCTCATGGGCTTCATGAATGAATGTCACATATCTCATCCA
GATTCTGCTGTGGTCCTTTTAATTGAGGCTGCACAGTACTTCATAGAAGC
GCCTGTTTTTGAAGTGCCCGGGGCTTTTAACACCTCTCACCGATGCACTG
CTGGGAGGCAAgcgtccttcctcacctGCTCTGGGGCATCCACGGCTCCT
CGCTGCGATAAAATGCACGGTGACAATCTGCTTCGGAGCACACGCTGTAA
TACTAGCTTAGAACATCATcaaggcggcggggacggccaGCCTCTGGATT
GGAGCACCAGCCTTGCCTCTtcgttctcttccctctcccagtcGTCGCGC
TCTTTTCGCACATCCAATCACCACGACGTCTGCCACGACGGTCACAATCA
TTGCCGATACAGCAGCTCTAGTAGTGACAGCAGTACCAGTAGCTGTTCGT
CTCTTGGTCATAACGCAgagccctctcctttcgcaGCCCTCACTGATACG
GTCTCAGGGGTGATGGATAGCGTTCAGACAGCGCGGAAGCATCCTGTCCT
TGCCACGGTTCTGTGGTTGTTGGGCGGGTCGGTGGAGCAGAAAGAAGCCA
GAGCAGGCCCCAAAGGGCCCTCTTCATCGCTAGCGGGCTCGGCTAGTACC
AGCTCCCGCTCTTCGGGCAACAACGACGAAGATTACATTTGCAACGATGA
GAACAACACTGTCGGCAAGTCTAGCGCCCCGAAGAACAACCCGCGTCAGC
CCTGCCTGGCGGACAACATGCTGGCCCGATCCCGCCACCCGCAAACAGGC
AAcgccgacgacgaggacaaggacgggcgCCAGCCAGACATCCATCGGCT
GCGCTGGACTGCGGGAGCAGCGACGGGGACAACCCCCCCGAAGACTAAGG
TTAAAGACCGCGTGATTTATTTCTTGGAGGGTGGTcggccctcctcggcc
gtTCCCGGTCTGGCGCCTCCGTCGGGGAACCGCTCTTTCCAGGGGGGCAG
GCTGGGGGGCGAGAATGGTGGCACGATCGCGGTGGAGAGGATCACGCACA
TGGAtagattggaggaggacgacttGGGCGAGCCccggagaggaagggaa
agggagagaggaaaaggggccagGGTCTATGATCAGGAGAACGCGACGTG
CGCCAGTACGGCCCAACGACAGCTGGAGCACTACAACAATCGGTGTGGAG
AGTGCTCCCCTGGCATCCCGCCCGAGCTAGCGGGGTCGGGGGCAGCCGGC
AATGATCCCGACGTGTCCCCACAGTGGGGCTGGTACGTGGCGCTCACGCC
CCCTAAGCCGGAGTTCTTCCAGGCAGGCAACAACGGGGccggcctgggag
gccaccaccaccatcaccaccaccatcaccaccaccgaggCCAccgtcat
catcctcctcgcgtcCCCGAACCTTTGCGCCCGGCCATGACATGAATGTG
TCTGTTCTGCTCGAAATCAGCACTGACACTTCGCCCCTCATTCGACCCTC
GAAACTTTTTTCCGCGGCTGGACACTCGTACGCACGCACTCACCATACAC
TCCTTGCTCATGGGCTTCATGAATGAATGTCACATATCTCATCCAGATTC
TGCTGTGGTCCTTTTAATTGAGGCTGCACAGTACTTCATAGAAGCGCCTG
TTTTTGAAGTGCCCGGGGCTTTTAACACCTCTCACCGATGCACTGCTGGG
AGGCAAgcgtccttcctcacctGCTCTGGGGCATCCACGGCTCCTCGCTG
CGATAAAATGCACGGTGACAATCTGCTTCGGAGCACACGCTGTAATACTA
GCTTAGAACATCATcaaggcggcggggacggccaGCCTCTGGATTGGAGC
ACCAGCCTTGCCTCTtcgttctcttccctctcccagtcGTCGCGCTCTTT
TCGCACATCCAATCACCACGACGTCTGCCACGACGGTCACAATCATTGCC
GATACAGCAGCTCTAGTAGTGACAGCAGTACCAGTAGCTGTTCGTCTCTT
GGTCATAACGCAgagccctctcctttcgcaGCCCTCACTGATACGGTCTC
AGGGGTGATGGATAGCGTTCAGACAGCGCGGAAGCATCCTGTCCTTGCCA
CGGTTCTGTGGTTGTTGGGCGGGTCGGTGGAGCAGAAAGAAGCCAGAGCA
GGCCCCAAAGGGCCCTCTTCATCGCTAGCGGGCTCGGCTAGTACCAGCTC
CCGCTCTTCGGGCAACAACGACGAAGATTACATTTGCAACGATGAGAACA
ACACTGTCGGCAAGTCTAGCGCCCCGAAGAACAACCCGCGTCAGCCCTGC
CTGGCGGACAACATGCTGGCCCGATCCCGCCACCCGCAAACAGGCAAcgc
cgacgacgaggacaaggacgggcgCCAGCCAGACATCCATCGGCTGCGCT
GGACTGCGGGAGCAGCGACGGGGACAACCCCCCCGAAGACTAAGGTTAAA
GACCGCGTGATTTATTTCTTGGAGGGTGGTcggccctcctcggccgtTCC
CGGTCTGGCGCCTCCGTCGGGGAACCGCTCTTTCCAGGGGGGCAGGCTGG
GGGGCGAGAATGGTGGCACGATCGCGGTGGAGAGGATCACGCACATGGAt
agattggaggaggacgacttGGGCGAGCCccggagaggaagggaaaggga
gagaggaaaaggggccagGGTCTATGATCAGGAGAACGCGACGTGCGCCA
GTACGGCCCAACGACAGCTGGAGCACTACAACAATCGGTGTGGAGAGTGC
TCCCCTGGCATCCCGCCCGAGCTAGCGGGGTCGGGGGCAGCCGGCAATGA
TCCCGACGTGTCCCCACAGTGGGGCTGGTACGTGGCGCTCACGCCCCCTA
AGCCGGAGTTCTTCCAGGCAGGCAACAACGGGGccggcctgggaggccac
caccaccatcaccaccaccatcaccaccaccgaggCCAccgtcatcatcc
tcctcgcgtcCCCGAACCTTTGCGCCCGGCCATGACATGA back to top
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