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Properties
| Property Name | Value |
|---|
| Product | Ankyrin repeat-containing protein |
| Orig transcript id | gnl|cribi|Naga_100015g49.6359.mrna |
| Orig protein id | gnl|cribi|Naga_100015g49.6359 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:743813..745355 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3113 ID=rna3113|Name=rna3113|organism=Nannochloropsis gaditana|type=mRNA|length=2916bp
TCAAGCTTGTCTGCGGGGAATTTTACGCGGGGTGGACGAGCGCGGCATCA
TGGTGCGTTTTGATCTTGACGGGCTGGACCTCTTCTTCCCTTATGATCGA
TTGTACGAGGAGCAGTACAACTATATGCTCGAATTAAAACGTGCCCTGGA
CGCCAAAGGGCATTGTCTGCTTGAGATGCCTACTGGCACGGGCAAGACCG
TTTGTCTAATTTCTCTGATAACGAGTTACCAGTTCGCGCACCCTGAAGTG
GGCAAGCTAATCTACTGCACTCGTACCGTGCCTGAGATGGTGAAGTGCGT
GGAGGAGGTTCGAAAGGTCATCGATTACCGAGTGAAATGCATCGGCGCCG
AGGGCGGGAAGGTACTGGCCGTCTGTCTGAGCTCGCGGCGGAACTTGTGT
ATCCACGAGAGGGTGATGGAGGAGAGCGACCGGGAGGCTGTGGACTCGGC
CTGCCGATCTATGACCGCGTCCTGGGTGCGTCAGAGAGGGGCGACGTCGG
CGAACGTGGAGCTCTGCCAGTACTACGAAGAATACGAGAAGAATGGCACG
GATGCGGGCATTGCCCACGGGATATACTCCCTGGACGACTTAAAGGAGTT
GGGGAAGGACCGGGGCTGGTGCCCGTATTTTCTGGCGCGGCATATCATTA
ATCATGCCAACATCCTCATCTACAACTACCAATACGTCCTGGATCCGAAG
GTGGCGGGCCTGGTCTCCAAGGAGCTGGAGGCAGAGAGCATCGTTGTCTT
CGACGAGGCCCACAACATCGACAACGTCTGCATCGAAGCCTTGTCTGTGG
AACTGGACGAGCGGTCGCTGGACAAAGCCACTCGGTGCCTAGGGAAACTC
TCCACCGAGGTGAGCAAGATGAAGCAGAAGGACGCGAACAAGCTGAACGA
GGAGTACCAGCGCCTTGTAAGGGGTCTGGCGGAGTCGGGGGCCCTGGGTG
GGGCTGCCGGGGCAGGCTCTGCGGCCTCTCCCGCGGACGCAATGCTGGCG
AACCCGGTCCCTCGACTGCCCGACGCCTTGGCCCAGGAGGCGGTACCGGG
GAATATTCGACGGGCCGAACACTTCCTGACCTTCATGAAGAAGGTGGTAG
AGCATTTGAAGACCCTCCTCCGTGTAGACAGCACGCAGAAGCAGTCCCCC
CTGGCTTTTCTCCACTACTTGCAGACGAAAACGGCGCTGGAAGTGAAGCC
CTTGCGCTTCACGTACTCCCGGCTCAACTCCCTACTGCGCACCCTGGAGG
TGACGCACCTGGACGAGTTCAACCCTTTGCAAGACGTGGCCGACTTCGCC
ACCCTGGTCGCCACCTACGCGGAGGGCTTCACGGTCATCACCGAGCCTCA
GGGGTCCAGCATCCCCGGGCTTCGCCAACCCGTCCTCCAACTCTCCTGCT
TGGACGCCTCCCTGGCCATCAAGCCGGTCTTCGAGCGCTTCAAATCGGTG
ATCATCACGTCCGGCACCCTCTCCCCCCTCGACTTGTACCCCACCCTCCT
CAGTTTCACGCCCGTGGTCCGGCAGAGCATGGACATGTCCATGTTCCGGA
AGAGCATTTGCCCCCTGGTGGTGACCAAGGGCTCGGGCCAGCAAGTGATC
ACGACCCGCTTCGAGAAGCGCGACGACCCCTCCGTGACGCGGGACTACGG
CGAGCTCCTGGTGGAGATAGCCACCCACGTCCCGGACGGAGTCGTCTGCT
TCTTCACCTCCTACTCCTACATGGAACGGGTCGTGCAAGAATGGGAGGAC
GGGGGGATCCTCCGGCAGATCTTGGAGAGGAAGTTGATCTTCATCGAGAC
CAAAGACGTGGTGGAGACGACCCTGGCATTGGACAACTTCCGACGGGCCT
GTGACTCTGGACGGGGGGCGATTTTCCTCTCCGTCGCCCGAGGAAAAGTG
GCGGAAGGGATCGATTTCGACCGGCACTACGGCAGGGCGGTCATTTTGAT
AGGAGTGCCCTTTCAATACACATTATCCCCGGTTATTCGCGAGCGACTCG
AATACTTGCAGACGAAGTTTCACATCAACCCTTCGGATTTTTTGACCTTC
GACGCCATGCGACAGGCGGCTCAGTGTGTGGGGAGGGTGATCCGCAGCAA
GCTGGACTACGGACTGATGATATTCGCCGACTCCCGGTACAACCGGTACG
ATAAGAGAACGAAGCTACCGAAGTGGATCTTGGACTGCATGGGAACGAAC
CATTTGGACTTGTCGACAGGAGACGCAATGGACAAGGTCCGGAGGTTTTT
GAAGGAAATGGCGCAGCCGATGGACGGGAAGGAGTTGCAAAAGATTCTGT
TGGACGAGACCCGGATCGCGGAGCTGACGGCCATCCACCAGAGGGGCCTT
CAGGGTCTCCAGGCGCGAAACAAGGGCGCGACACTTGGGGTGGCAGGAGC
AGCCGCGCTGCCCTCACTCACGCAAGGTGGGACAGGAGGGGGAGCGGGTG
GAAGGGGAAGCGTGGACGGGAAGGTGGGCGGTGGGGGGGGGGCAGCGGCG
GGTGTGGTGGGAGGGGGCGTCGCGGTCCATGGACCCGGAGCTCGACGGGA
GGAGCAGGCAGGGGATGACGTTGCTGCCATCGAACGGGGGGCATTGATTC
GGGAGGAGGAGGAGGAGCGTCGGCGGGTGCGTGAGGAGGCGGAGGCGATG
CGGCAGGATGCGGAGGACGAGGCCTGGCTGGAGCGTGCGGATGTGGAGGA
GGGGCAGGACGCAGCGGTTGACATGGAAGAGGAGCGAGAGAGGGAGAAGG
AGGCTCCCGTGTCGATGCCGCAGCAGGAAATGGGCCAAAAGGGCCAGGAG
AAGAAACGAGAGGTCGATTTGGGGGGGGAGGGGAGCGCCATGGAGGTCGA
GCAGACGCGAGATGTAAGCTAGCGGTGTACAGTGGCTAAGAAGTAGATCC
CGAGTGTTTAATCTGC back to topprotein sequence of rna3113 >rna3113-protein ID=rna3113-protein|Name=rna3113|organism=Nannochloropsis gaditana|type=polypeptide|length=403bp
MSSAMAVPRARQVQDDEDDDMVLLAKLLREEEDREQESLFASDRRPDPIS
TLPKGFAGNDGVKGMTRPHGVAKRQRVESSAKAKNRRSVVDQEEEEDWIR
VADAVVPIRRPKIYNDNDLFRSLQLMDFESVQALLEHDRELVSARDEDFA
QPLAVAVEARFERGVKFLLHLKCPLLEVDGRGYSALHLAVEVFADMPFLL
RYLLQHGGMDINARAPPSLGPCPLHLASGTRALRLLLACGADPTVPAQNE
REGSEGGNVLAWVERTWPQTREKTKARFMLACLSPYHSFVVAKLCFISRM
YAVPGAPGAAPAANPCTGARSARFPPSPSLVAVQARPPSHSLTHRIGAMI
ANARLDGQTEEVNPLKDDEHSDEAARAVTVANSRKDAGAGRVRSGSACLL
CRG back to topmRNA from alignment at CM002460.1:743813..745355- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3113 ID=rna3113|Name=rna3113|organism=Nannochloropsis gaditana|type=mRNA|length=1543bp|location=Sequence derived from alignment at CM002460.1:743813..745355- (Nannochloropsis gaditana)
ATGTCATCTGCTATGGCTGTCCCGAGAGCACGTCAAGTGCAGGATGATGA
GGACGATGATATGGTATTACTTGCGAAGCTACTGCGGGAAGAGGAGGACC
GAGAACAGGAATCACTCTTCGCTAGTGACAGAAGACCTGATCCCATTTCT
ACTCTCCCGAAGGGTTTTGCTGGGAATGATGGCGTCAAAGGGATGACAAG
ACCTCATGGTGTTGCTAAGCGTCAGCGCGTCGAGTCTTCTGCAAAAGCCA
AGAACAGGCGCAGTGTCGTGGACCAAGAGGAGGAGGAAGATTGGATCCGC
GTCGCGGATGCAGTCGTACCTATTCGAAGGCCAAAAATCTACAACGACAA
CGACTTATTCCGGAGCCTACAGCTGATGGATTTTGAAAGCGTGCAAGCGC
TGCTCGAGCACGACCGGGAGCTGGTAAGCGCCCGAGACGAGGACTTCGCT
CAGCCCTTGGCAGTGGCTGTTGAGGCGCGCTTTGAAAGAGGGGTCAAGTT
TCTCCTCCACTTGAAATGCCCGCTCCTCGAGGTGGACGGCAGGGGTTACA
GCGCCTTGCACTTGGCGGTGGAGGTCTTTGCGGACATGCCTTTCTTGTTG
CGGTACCTGCTGCAACACGGAGGTATGGACATCAATGCCCGCGCCCCCCC
CTCGCTCGGCCCATGCCCCCTTCACCTGGCATCGGGCACTCGCGCCCTGA
GGCTTCTGCTTGCTTGCGGCGCCGACCCCACGGTCCCGGCCCAAAATGAG
AGGGAAGGGAGCGAGGGAGGAAATGTGCTGGCGTGGGTGGAGCGTACTTG
GCCGCAGACTCGAGAAAAGACCAAGGCGCGCTTCATGCTCGCGTGCCTGT
CGCCCTACCACAGCTTCGTGGTGGCCAAGCTCTGCTTCATTTCCCGCATG
TACGCAGTCCCTGGTGCACCGGGAGCAGCGCCCGCGGCCAACCCTTGCAC
TGGGGCCCGAAGCGCCCGCTTCCCCCCTTCCCCCTCCCTGGTGGCCGTTC
AAGCACGTCCCCCCTCCCACTCCCTCACCCATCGCATCGGGGCTATGATT
GCAAACGCGCGCCTGGACGGGCAGACGGAGGAAGTGAATCCTCTAAAGGA
CGACGAGCATTCGGACGAGGTGTGGTGCCGGGAAGAAGTCTCCGGCCAGA
TCTTCAGCTTCGTGCAGGACGGCCGCCTCTACCTAGCGCGGAGTGGGGGA
GGAAGCAGGGCCCCTCCCGTGGTCCCTCGGGCTCCACCTGCCCGTCCTCC
CTTCTTTCCCGCCGCTCCCCTCCCGGGAGCATCACGAGGTAGCCGTGAGA
CCACGAAGGGAGACCAGGACCGCTCGGGCGCGGCGGCCTCGCCGACCATG
TGCCCCTTGTCGGCGTTGCGGGCCGCCCAGGCCGAGGTTTTCCCGGTGGG
TCAGGAGAGAGGGGAGGGAAAGATTCTTTCTGCCCCCGAGAACGGAGCAG
GCCGCTCGCGCAGTAACCGTTGCCAATTCAAGGAAGGACGCGGGTGCTGG
GAGGGTCAGGAGTGGCTCTGCCTGCCTCCTTTGCCGCGGGTGA back to topCoding sequence (CDS) from alignment at CM002460.1:743813..745355- >rna3113 ID=rna3113|Name=rna3113|organism=Nannochloropsis gaditana|type=CDS|length=2424bp|location=Sequence derived from alignment at CM002460.1:743813..745355- (Nannochloropsis gaditana)
GCCGCTCGCGCAGTAACCGTTGCCAATTCAAGGAAGGACGCGGGTGCTGG
GAGGGTCAGGAGTGGCTCTGCCTGCCTCCTTTGCCGCGGGTGAATGTCAT
CTGCTATGGCTGTCCCGAGAGCACGTCAAGTGCAGGATGATGAGGACGAT
GATATGGTATTACTTGCGAAGCTACTGCGGGAAGAGGAGGACCGAGAACA
GGAATCACTCTTCGCTAGTGACAGAAGACCTGATCCCATTTCTACTCTCC
CGAAGGGTTTTGCTGGGAATGATGGCGTCAAAGGGATGACAAGACCTCAT
GGTGTTGCTAAGCGTCAGCGCGTCGAGTCTTCTGCAAAAGCCAAGAACAG
GCGCAGTGTCGTGGACCAAGAGGAGGAGGAAGATTGGATCCGCGTCGCGG
ATGCAGTCGTACCTATTCGAAGGCCAAAAATCTACAACGACAACGACTTA
TTCCGGAGCCTACAGCTGATGGATTTTGAAAGCGTGCAAGCGCTGCTCGA
GCACGACCGGGAGCTGGTAAGCGCCCGAGACGAGGACTTCGCTCAGCCCT
TGGCAGTGGCTGTTGAGGCGCGCTTTGAAAGAGGGGTCAAGTTTCTCCTC
CACTTGAAATGCCCGCTCCTCGAGGTGGACGGCAGGGGTTACAGCGCCTT
GCACTTGGCGGTGGAGGTCTTTGCGGACATGCCTTTCTTGTTGCGGTACC
TGCTGCAACACGGAGGTATGGACATCAATGCCCGCGCCCCCCCCTCGCTC
GGCCCATGCCCCCTTCACCTGGCATCGGGCACTCGCGCCCTGAGGCTTCT
GCTTGCTTGCGGCGCCGACCCCACGGTCCCGGCCCAAAATGAGAGGGAAG
GGAGCGAGGGAGGAAATGTGCTGGCGTGGGTGGAGCGTACTTGGCCGCAG
ACTCGAGAAAAGACCAAGGCGCGCTTCATGCTCGCGTGCCTGTCGCCCTA
CCACAGCTTCGTGGTGGCCAAGCTCTGCTTCATTTCCCGCATGTACGCAG
TCCCTGGTGCACCGGGAGCAGCGCCCGCGGCCAACCCTTGCACTGGGGCC
CGAAGCGCCCGCTTCCCCCCTTCCCCCTCCCTGGTGGCCGTTCAAGCACG
TCCCCCCTCCCACTCCCTCACCCATCGCATCGGGGCTATGATTGCAAACG
CGCGCCTGGACGGGCAGACGGAGGAAGTGAATCCTCTAAAGGACGACGAG
CATTCGGACGAGGCCGCTCGCGCAGTAACCGTTGCCAATTCAAGGAAGGA
CGCGGGTGCTGGGAGGGTCAGGAGTGGCTCTGCCTGCCTCCTTTGCCGCG
GGTGAATGTCATCTGCTATGGCTGTCCCGAGAGCACGTCAAGTGCAGGAT
GATGAGGACGATGATATGGTATTACTTGCGAAGCTACTGCGGGAAGAGGA
GGACCGAGAACAGGAATCACTCTTCGCTAGTGACAGAAGACCTGATCCCA
TTTCTACTCTCCCGAAGGGTTTTGCTGGGAATGATGGCGTCAAAGGGATG
ACAAGACCTCATGGTGTTGCTAAGCGTCAGCGCGTCGAGTCTTCTGCAAA
AGCCAAGAACAGGCGCAGTGTCGTGGACCAAGAGGAGGAGGAAGATTGGA
TCCGCGTCGCGGATGCAGTCGTACCTATTCGAAGGCCAAAAATCTACAAC
GACAACGACTTATTCCGGAGCCTACAGCTGATGGATTTTGAAAGCGTGCA
AGCGCTGCTCGAGCACGACCGGGAGCTGGTAAGCGCCCGAGACGAGGACT
TCGCTCAGCCCTTGGCAGTGGCTGTTGAGGCGCGCTTTGAAAGAGGGGTC
AAGTTTCTCCTCCACTTGAAATGCCCGCTCCTCGAGGTGGACGGCAGGGG
TTACAGCGCCTTGCACTTGGCGGTGGAGGTCTTTGCGGACATGCCTTTCT
TGTTGCGGTACCTGCTGCAACACGGAGGTATGGACATCAATGCCCGCGCC
CCCCCCTCGCTCGGCCCATGCCCCCTTCACCTGGCATCGGGCACTCGCGC
CCTGAGGCTTCTGCTTGCTTGCGGCGCCGACCCCACGGTCCCGGCCCAAA
ATGAGAGGGAAGGGAGCGAGGGAGGAAATGTGCTGGCGTGGGTGGAGCGT
ACTTGGCCGCAGACTCGAGAAAAGACCAAGGCGCGCTTCATGCTCGCGTG
CCTGTCGCCCTACCACAGCTTCGTGGTGGCCAAGCTCTGCTTCATTTCCC
GCATGTACGCAGTCCCTGGTGCACCGGGAGCAGCGCCCGCGGCCAACCCT
TGCACTGGGGCCCGAAGCGCCCGCTTCCCCCCTTCCCCCTCCCTGGTGGC
CGTTCAAGCACGTCCCCCCTCCCACTCCCTCACCCATCGCATCGGGGCTA
TGATTGCAAACGCGCGCCTGGACGGGCAGACGGAGGAAGTGAATCCTCTA
AAGGACGACGAGCATTCGGACGAG back to top
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