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Properties
| Property Name | Value |
|---|
| Product | regulator of chromosome condensation -like protein |
| Orig transcript id | gnl|cribi|Naga_100026g4.10625.mrna |
| Orig protein id | gnl|cribi|Naga_100026g4.10625 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:768283..770137 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna311 ID=rna311|Name=rna311|organism=Nannochloropsis gaditana|type=mRNA|length=1454bp
CGTTGACAGCCATCAAGCTTCATTCTTTGTGCTTTTTCGTATGAATAATA
TGATTGATATGGATGATATGGATAAGATATGGATGATATGGATAATATAG
ACATAATAGTACAGATTTTGTTGTTTTTGCTCTCAAATGCTCCCCCTCTG
TGGTGCTATCGCGCCCAGGCCGTGAGGGATCCGTTAATATTGATAGGCAA
GTCGTCCAGTGTTGAAGCAAATATTCTATAAGGAGTGAATAAGTTCGACA
GAATGACGCTGTTAAAAGGTCTCAATGCTTCCTCTTTTATGATACGTTTG
TTCTCACTTCGTCTGACGCAGTCCCTGCACGTGAGTGCAAGTTGCATGTA
ATGATCACACTCCATGACCCACGCAAATGTCATCGACTTCCTGCCATAGT
TATTCACGGATCATACTGTGCTTTTTTTTTTAGATTTATTGGTAGTAAAC
AATGCCATACGAGGCGACCACTGATTTAAATGAAAACAGTGCAATCGTTC
GCATGAAGGCCTGCCTATCGAAGTTCGAGACCGAGGAAGGAAGACTGAAA
GGTTTTGCATTCAAGCCTTCCCCAACCGATATACTTGTTGTTACGTCGCC
TAAAGCCGGCACAACTTGGATGCAGCAGATTTGTCATCAATTGCGGACAT
GTGGTGACATGAACTTTTCCGAAATTTCAGAGGTGGTTCCTTGGGTAGAG
CTTGCGCACGATCTTGGGCAAGACCTGAACGCAGACCAGGGGGGGCTGAG
CCCGCGGCTGTTCAAAAGCCACGCGTGGAAACCGCATGTGCCCAAAGGAG
GGCGTTACATCGTGTGTTTTCGGGATCCTGAGGATGTGGTCTACAGCTTT
TATCGCTTCTTCGACGGGTGGTTCATCCAACCCAAGGGCGCCGTGTCTTT
CGAGGTGTTCGCTCGCGAGTTTTTTCTTCACCGAGATTATCCGACGTCTC
CGATGCAAAATGCATCGTATTGGCATCACTTGGTCAGCTGGATGGAAAAT
ATCGTCAAAAAGGGCGGTGGGCAGGAAGATGAGGACGTGCTCTTGGTTGC
CTTCGAGGACTTGAAGGGAGACCTGGAGCGCCAGGTGAGACGGGTCGCGA
CTTTCATGGGGTACACGGGGGGTGAATTCGAAGAGCGTGTCCGCGTGGCG
ACTGAGCACAGCTCCTTGGCCTTCATGCAGAGGCACCGGGACAAGTTCGA
CGAGCACCTGACAAAGGAGGCGCGCAATGAGGCCATGGGGCTACCGCGGG
ATGCCGGGCGAGAGAACGCCAAAGTGAAGGAGGGAGGCGTGGGGGCGGCG
GCAGTGGCAATGTCGCCTGCGCTGCGTGAAGCCATGCAACGCCGATGGCA
AGAAGTGGCGAGCGAGTCGCTCGGCTTCGGCGATTACAGCGAGCTGCTCG
TGTGGCACAGGCAGCAGCAAGTGGGGCTAAATGGGAGCGAGCCTTAAGCA
AGGA back to topprotein sequence of rna311 >rna311-protein ID=rna311-protein|Name=rna311|organism=Nannochloropsis gaditana|type=polypeptide|length=435bp
MRALLQQRCRRLAVAQAKLRGVPAVARVRQSTTFSTLSATSSHTIVPSTR
VFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNP
WGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVEAL
QDVKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPR
PKVVRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSS
DHRVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLG
GGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMK
IHLEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHG
TRSYTPHPKLVADGLAGRGVVKVACGHRHMAVITD back to topmRNA from alignment at CM002455.1:768283..770137- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna311 ID=rna311|Name=rna311|organism=Nannochloropsis gaditana|type=mRNA|length=1855bp|location=Sequence derived from alignment at CM002455.1:768283..770137- (Nannochloropsis gaditana)
ATGAGAGCGTTACTACAGCAGAGATGTCGACGACTTGCAGTGGCTCAGGT
ATGTGTGAGGGGGGTGCCGATTCTAACGTAGTTAAAAATAGTCTTCTTAG
TTTTTAAAGTAGGCACACGCAAGCCTTCACAGCGATGACCTCCATCACTC
TCATCTAGGCCAAATTACGAGGCGTACCGGCAGTTGCGCGTGTAAGGCAA
TCGACAACTTTCTCAACATTGTCTGCAACGTCATCTCATACCATCGTGCC
CTCGACGCGAGTTTTTGCGTGGGGTCAGGGCACCGAAGGACAGCTGGGTC
ATTCTCCCATACAAAAAAGTGCTCTTACGGGGGCTTACGTCGAGCTTTCA
CCGCGCGAGCTACGGCTCGACACTGAACAAGACCAGCAAAAAATAGAAAA
ACACAACCCTTGGGGTTTTGTGGACCTGGCTGCAGGGCTGAACTACTCGG
CTGGGGTCACAGAGGACGGGAAATTATACACGTGGGGTGACGGGAGCAAC
CACAAGCTCGGCCACGGCGACAGCAAGCCCGTATACCGCCCCAGGCAGGT
GGAGGCCCTTCAAGACGTGAAGATAGTCAAGGTGGCATGCGGGTAAGCAG
TGGGTAGATCCCGACTCGGCTTCGAAGTTGTTAGGCAAGGAGCAGGTGTG
TCAGTGTGTGCGCGAAGATTTGCGTGCCTGTGCTTAGGCCCTTGCCGTGG
CCGGGTACTACCTGCAATATAAAACTGCTTATATTGATGCCTTCCTCCCG
CTTTCCCTCCTTTCTTCATGTTTTGGCTACCTATTTCGCATTTAGCGATT
TTCACACGGCAGCCATCGACGAGGACGGGAGGCTTTGGACCTGGGGTTGG
GGTGGGTCGCTTTTCGGGGGCATCGGCGGTCTAGGCCACGGAGATGAGGC
TGAGCAGCCGCGACCAAAAGTTGTGAGAAGTCTCGTGGATTATGGGTGCC
GCGTGGGGAGCGTGGCATGCGGAGAGAAGCACACGCTGATCCTTACCGAC
GACGGGGAGGTGTTGACGGCGGGCAACGGGGAGTACGGCAGGTTGGGGAA
CGGCGGTAGCAGTGACCATCGCGTTCCCGAGCCTGTGGAGTTGTTCGATG
AGAAGTAAGTTGTCTTGGGAGGGGTGGCCGTTGCCGCGGCCCGGGGTTCT
GATCCTCGTCCCTCACATTCTCCTCCCCGGCGCAGGACCAACATCGTGGA
GGTGGCGGCAGGCCACGCCTTCAATCTGGTGCTGACACAGGACGGCAAAA
TCTTTACCTGGGGAAGGAACGAACAGGGCCAGGTAGGGGCTGGGGGAGGC
TGTGGCGTGTGGAACGGGGCATTTGCCGCCAGCTTCGAGAACGTCACGCA
CTTACAACTTGAAGATCGTTCACCGCCACTTTTATTCAGAGGAAATGAAA
GACTGACATGTCTCCTTATAATTCCATCACCTCAGTTGGGCCTGGGCGGC
GGCATCAGCATGGATGTGTACTCGATGGAGGCGGTGCCACTCCTTGTCGA
GGCTCTGGAAAGCAAAAAGGTGGTGCACGTGGCCGCGGGGCACTCACACT
CGGCGGCAGTGACCGAGGAGGGAGAACTTTACATGTGGGGCATGAAGATC
CACTTGGAGCCCCAGGTCTTTAGGGTTGGGGAGGGGGATAAGGTCTGGCA
AGTCGGGTGCGGCGGCAGCCACACGGCCGTGGTCACGGAGGACGCGCACC
AGCTGTTCACTTTTGGGAAAGGGTCTTCCCTTTGTCTGGGCCACGGCACC
AGAAGCTACACGCCACACCCCAAATTGGTTGCCGATGGGCTGGCCGGGCG
GGGGGTCGTGAAGGTAGCATGCGGGCACAGGCACATGGCCGTCATTACGG
ACTGA back to topCoding sequence (CDS) from alignment at CM002455.1:768283..770137- >rna311 ID=rna311|Name=rna311|organism=Nannochloropsis gaditana|type=CDS|length=6540bp|location=Sequence derived from alignment at CM002455.1:768283..770137- (Nannochloropsis gaditana)
TTGGGCCTGGGCGGCGGCATCAGCATGGATGTGTACTCGATGGAGGCGGT
GCCACTCCTTGTCGAGGCTCTGGAAAGCAAAAAGGTGGTGCACGTGGCCG
CGGGGCACTCACACTCGGCGGCAGTGACCGAGGAGGGAGAACTTTACATG
TGGGGCATGAAGATCCACTTGGAGCCCCAGGTCTTTAGGGTTGGGGAGGG
GGATAAGGTCTGGCAAGTCGGGTGCGGCGGCAGCCACACGGCCGTGGTCA
CGGAGGACGCGCACCAGCTGTTCACTTTTGGGAAAGGGTCTTCCCTTTGT
CTGGGCCACGGCACCAGAAGCTACACGCCACACCCCAAATTGGTTGCCGA
TGGGCTGGCCGGGCGGGGGGTCGTGAAGGTAGCATGCGGGCACAGGCACA
TGGCCGTCATTACGGACTGAGACCAACATCGTGGAGGTGGCGGCAGGCCA
CGCCTTCAATCTGGTGCTGACACAGGACGGCAAAATCTTTACCTGGGGAA
GGAACGAACAGGGCCAGCGATTTTCACACGGCAGCCATCGACGAGGACGG
GAGGCTTTGGACCTGGGGTTGGGGTGGGTCGCTTTTCGGGGGCATCGGCG
GTCTAGGCCACGGAGATGAGGCTGAGCAGCCGCGACCAAAAGTTGTGAGA
AGTCTCGTGGATTATGGGTGCCGCGTGGGGAGCGTGGCATGCGGAGAGAA
GCACACGCTGATCCTTACCGACGACGGGGAGGTGTTGACGGCGGGCAACG
GGGAGTACGGCAGGTTGGGGAACGGCGGTAGCAGTGACCATCGCGTTCCC
GAGCCTGTGGAGTTGTTCGATGAGAAGCCAAATTACGAGGCGTACCGGCA
GTTGCGCGTGTAAGGCAATCGACAACTTTCTCAACATTGTCTGCAACGTC
ATCTCATACCATCGTGCCCTCGACGCGAGTTTTTGCGTGGGGTCAGGGCA
CCGAAGGACAGCTGGGTCATTCTCCCATACAAAAAAGTGCTCTTACGGGG
GCTTACGTCGAGCTTTCACCGCGCGAGCTACGGCTCGACACTGAACAAGA
CCAGCAAAAAATAGAAAAACACAACCCTTGGGGTTTTGTGGACCTGGCTG
CAGGGCTGAACTACTCGGCTGGGGTCACAGAGGACGGGAAATTATACACG
TGGGGTGACGGGAGCAACCACAAGCTCGGCCACGGCGACAGCAAGCCCGT
ATACCGCCCCAGGCAGGTGGAGGCCCTTCAAGACGTGAAGATAGTCAAGG
TGGCATGCGGATGAGAGCGTTACTACAGCAGAGATGTCGACGACTTGCAG
TGGCTCAGTTGGGCCTGGGCGGCGGCATCAGCATGGATGTGTACTCGATG
GAGGCGGTGCCACTCCTTGTCGAGGCTCTGGAAAGCAAAAAGGTGGTGCA
CGTGGCCGCGGGGCACTCACACTCGGCGGCAGTGACCGAGGAGGGAGAAC
TTTACATGTGGGGCATGAAGATCCACTTGGAGCCCCAGGTCTTTAGGGTT
GGGGAGGGGGATAAGGTCTGGCAAGTCGGGTGCGGCGGCAGCCACACGGC
CGTGGTCACGGAGGACGCGCACCAGCTGTTCACTTTTGGGAAAGGGTCTT
CCCTTTGTCTGGGCCACGGCACCAGAAGCTACACGCCACACCCCAAATTG
GTTGCCGATGGGCTGGCCGGGCGGGGGGTCGTGAAGGTAGCATGCGGGCA
CAGGCACATGGCCGTCATTACGGACTGAGACCAACATCGTGGAGGTGGCG
GCAGGCCACGCCTTCAATCTGGTGCTGACACAGGACGGCAAAATCTTTAC
CTGGGGAAGGAACGAACAGGGCCAGCGATTTTCACACGGCAGCCATCGAC
GAGGACGGGAGGCTTTGGACCTGGGGTTGGGGTGGGTCGCTTTTCGGGGG
CATCGGCGGTCTAGGCCACGGAGATGAGGCTGAGCAGCCGCGACCAAAAG
TTGTGAGAAGTCTCGTGGATTATGGGTGCCGCGTGGGGAGCGTGGCATGC
GGAGAGAAGCACACGCTGATCCTTACCGACGACGGGGAGGTGTTGACGGC
GGGCAACGGGGAGTACGGCAGGTTGGGGAACGGCGGTAGCAGTGACCATC
GCGTTCCCGAGCCTGTGGAGTTGTTCGATGAGAAGCCAAATTACGAGGCG
TACCGGCAGTTGCGCGTGTAAGGCAATCGACAACTTTCTCAACATTGTCT
GCAACGTCATCTCATACCATCGTGCCCTCGACGCGAGTTTTTGCGTGGGG
TCAGGGCACCGAAGGACAGCTGGGTCATTCTCCCATACAAAAAAGTGCTC
TTACGGGGGCTTACGTCGAGCTTTCACCGCGCGAGCTACGGCTCGACACT
GAACAAGACCAGCAAAAAATAGAAAAACACAACCCTTGGGGTTTTGTGGA
CCTGGCTGCAGGGCTGAACTACTCGGCTGGGGTCACAGAGGACGGGAAAT
TATACACGTGGGGTGACGGGAGCAACCACAAGCTCGGCCACGGCGACAGC
AAGCCCGTATACCGCCCCAGGCAGGTGGAGGCCCTTCAAGACGTGAAGAT
AGTCAAGGTGGCATGCGGATGAGAGCGTTACTACAGCAGAGATGTCGACG
ACTTGCAGTGGCTCAGTTGGGCCTGGGCGGCGGCATCAGCATGGATGTGT
ACTCGATGGAGGCGGTGCCACTCCTTGTCGAGGCTCTGGAAAGCAAAAAG
GTGGTGCACGTGGCCGCGGGGCACTCACACTCGGCGGCAGTGACCGAGGA
GGGAGAACTTTACATGTGGGGCATGAAGATCCACTTGGAGCCCCAGGTCT
TTAGGGTTGGGGAGGGGGATAAGGTCTGGCAAGTCGGGTGCGGCGGCAGC
CACACGGCCGTGGTCACGGAGGACGCGCACCAGCTGTTCACTTTTGGGAA
AGGGTCTTCCCTTTGTCTGGGCCACGGCACCAGAAGCTACACGCCACACC
CCAAATTGGTTGCCGATGGGCTGGCCGGGCGGGGGGTCGTGAAGGTAGCA
TGCGGGCACAGGCACATGGCCGTCATTACGGACTGAGACCAACATCGTGG
AGGTGGCGGCAGGCCACGCCTTCAATCTGGTGCTGACACAGGACGGCAAA
ATCTTTACCTGGGGAAGGAACGAACAGGGCCAGCGATTTTCACACGGCAG
CCATCGACGAGGACGGGAGGCTTTGGACCTGGGGTTGGGGTGGGTCGCTT
TTCGGGGGCATCGGCGGTCTAGGCCACGGAGATGAGGCTGAGCAGCCGCG
ACCAAAAGTTGTGAGAAGTCTCGTGGATTATGGGTGCCGCGTGGGGAGCG
TGGCATGCGGAGAGAAGCACACGCTGATCCTTACCGACGACGGGGAGGTG
TTGACGGCGGGCAACGGGGAGTACGGCAGGTTGGGGAACGGCGGTAGCAG
TGACCATCGCGTTCCCGAGCCTGTGGAGTTGTTCGATGAGAAGCCAAATT
ACGAGGCGTACCGGCAGTTGCGCGTGTAAGGCAATCGACAACTTTCTCAA
CATTGTCTGCAACGTCATCTCATACCATCGTGCCCTCGACGCGAGTTTTT
GCGTGGGGTCAGGGCACCGAAGGACAGCTGGGTCATTCTCCCATACAAAA
AAGTGCTCTTACGGGGGCTTACGTCGAGCTTTCACCGCGCGAGCTACGGC
TCGACACTGAACAAGACCAGCAAAAAATAGAAAAACACAACCCTTGGGGT
TTTGTGGACCTGGCTGCAGGGCTGAACTACTCGGCTGGGGTCACAGAGGA
CGGGAAATTATACACGTGGGGTGACGGGAGCAACCACAAGCTCGGCCACG
GCGACAGCAAGCCCGTATACCGCCCCAGGCAGGTGGAGGCCCTTCAAGAC
GTGAAGATAGTCAAGGTGGCATGCGGATGAGAGCGTTACTACAGCAGAGA
TGTCGACGACTTGCAGTGGCTCAGTTGGGCCTGGGCGGCGGCATCAGCAT
GGATGTGTACTCGATGGAGGCGGTGCCACTCCTTGTCGAGGCTCTGGAAA
GCAAAAAGGTGGTGCACGTGGCCGCGGGGCACTCACACTCGGCGGCAGTG
ACCGAGGAGGGAGAACTTTACATGTGGGGCATGAAGATCCACTTGGAGCC
CCAGGTCTTTAGGGTTGGGGAGGGGGATAAGGTCTGGCAAGTCGGGTGCG
GCGGCAGCCACACGGCCGTGGTCACGGAGGACGCGCACCAGCTGTTCACT
TTTGGGAAAGGGTCTTCCCTTTGTCTGGGCCACGGCACCAGAAGCTACAC
GCCACACCCCAAATTGGTTGCCGATGGGCTGGCCGGGCGGGGGGTCGTGA
AGGTAGCATGCGGGCACAGGCACATGGCCGTCATTACGGACTGAGACCAA
CATCGTGGAGGTGGCGGCAGGCCACGCCTTCAATCTGGTGCTGACACAGG
ACGGCAAAATCTTTACCTGGGGAAGGAACGAACAGGGCCAGCGATTTTCA
CACGGCAGCCATCGACGAGGACGGGAGGCTTTGGACCTGGGGTTGGGGTG
GGTCGCTTTTCGGGGGCATCGGCGGTCTAGGCCACGGAGATGAGGCTGAG
CAGCCGCGACCAAAAGTTGTGAGAAGTCTCGTGGATTATGGGTGCCGCGT
GGGGAGCGTGGCATGCGGAGAGAAGCACACGCTGATCCTTACCGACGACG
GGGAGGTGTTGACGGCGGGCAACGGGGAGTACGGCAGGTTGGGGAACGGC
GGTAGCAGTGACCATCGCGTTCCCGAGCCTGTGGAGTTGTTCGATGAGAA
GCCAAATTACGAGGCGTACCGGCAGTTGCGCGTGTAAGGCAATCGACAAC
TTTCTCAACATTGTCTGCAACGTCATCTCATACCATCGTGCCCTCGACGC
GAGTTTTTGCGTGGGGTCAGGGCACCGAAGGACAGCTGGGTCATTCTCCC
ATACAAAAAAGTGCTCTTACGGGGGCTTACGTCGAGCTTTCACCGCGCGA
GCTACGGCTCGACACTGAACAAGACCAGCAAAAAATAGAAAAACACAACC
CTTGGGGTTTTGTGGACCTGGCTGCAGGGCTGAACTACTCGGCTGGGGTC
ACAGAGGACGGGAAATTATACACGTGGGGTGACGGGAGCAACCACAAGCT
CGGCCACGGCGACAGCAAGCCCGTATACCGCCCCAGGCAGGTGGAGGCCC
TTCAAGACGTGAAGATAGTCAAGGTGGCATGCGGATGAGAGCGTTACTAC
AGCAGAGATGTCGACGACTTGCAGTGGCTCAGTTGGGCCTGGGCGGCGGC
ATCAGCATGGATGTGTACTCGATGGAGGCGGTGCCACTCCTTGTCGAGGC
TCTGGAAAGCAAAAAGGTGGTGCACGTGGCCGCGGGGCACTCACACTCGG
CGGCAGTGACCGAGGAGGGAGAACTTTACATGTGGGGCATGAAGATCCAC
TTGGAGCCCCAGGTCTTTAGGGTTGGGGAGGGGGATAAGGTCTGGCAAGT
CGGGTGCGGCGGCAGCCACACGGCCGTGGTCACGGAGGACGCGCACCAGC
TGTTCACTTTTGGGAAAGGGTCTTCCCTTTGTCTGGGCCACGGCACCAGA
AGCTACACGCCACACCCCAAATTGGTTGCCGATGGGCTGGCCGGGCGGGG
GGTCGTGAAGGTAGCATGCGGGCACAGGCACATGGCCGTCATTACGGACT
GAGACCAACATCGTGGAGGTGGCGGCAGGCCACGCCTTCAATCTGGTGCT
GACACAGGACGGCAAAATCTTTACCTGGGGAAGGAACGAACAGGGCCAGC
GATTTTCACACGGCAGCCATCGACGAGGACGGGAGGCTTTGGACCTGGGG
TTGGGGTGGGTCGCTTTTCGGGGGCATCGGCGGTCTAGGCCACGGAGATG
AGGCTGAGCAGCCGCGACCAAAAGTTGTGAGAAGTCTCGTGGATTATGGG
TGCCGCGTGGGGAGCGTGGCATGCGGAGAGAAGCACACGCTGATCCTTAC
CGACGACGGGGAGGTGTTGACGGCGGGCAACGGGGAGTACGGCAGGTTGG
GGAACGGCGGTAGCAGTGACCATCGCGTTCCCGAGCCTGTGGAGTTGTTC
GATGAGAAGCCAAATTACGAGGCGTACCGGCAGTTGCGCGTGTAAGGCAA
TCGACAACTTTCTCAACATTGTCTGCAACGTCATCTCATACCATCGTGCC
CTCGACGCGAGTTTTTGCGTGGGGTCAGGGCACCGAAGGACAGCTGGGTC
ATTCTCCCATACAAAAAAGTGCTCTTACGGGGGCTTACGTCGAGCTTTCA
CCGCGCGAGCTACGGCTCGACACTGAACAAGACCAGCAAAAAATAGAAAA
ACACAACCCTTGGGGTTTTGTGGACCTGGCTGCAGGGCTGAACTACTCGG
CTGGGGTCACAGAGGACGGGAAATTATACACGTGGGGTGACGGGAGCAAC
CACAAGCTCGGCCACGGCGACAGCAAGCCCGTATACCGCCCCAGGCAGGT
GGAGGCCCTTCAAGACGTGAAGATAGTCAAGGTGGCATGCGGATGAGAGC
GTTACTACAGCAGAGATGTCGACGACTTGCAGTGGCTCAG back to top
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