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Properties
| Property Name | Value |
|---|
| Product | histidinol-phosphate aminotransferase |
| Orig transcript id | gnl|cribi|Naga_100015g62.6351.mrna |
| Orig protein id | gnl|cribi|Naga_100015g62.6351 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:713925..715709 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3100 ID=rna3100|Name=rna3100|organism=Nannochloropsis gaditana|type=mRNA|length=4090bp
TTGGGCGTGACGCGAAGTGTATTGGTCGTGCCGCGTAAAAGAAGGGCTGG
CAGGTGTGGGTAGTGGTGCTTTTACGCGCTTGCAAAACTGCCCTTGCAAG
GTCGAAGAGGAAATTGAACTTTACGACTTGCACTCCCACACGATTTTTGT
CCGTCCGGTGAGAGGAAAAGAATGTGCCACTGGTTTCTAAAACACTGAAA
GGGGAGCACAGATAAGCGTTGCACTTCTTTCAATTTGTGTTGTGGAGGAC
AGCAGAAAACAGCGGGGAGCTTGCATGGAATGCGTCGTACACCAAGAACG
CACCCACCCAACACCCTAGTGGAACTTTCTTCCTTTTCCTTTAATTTTCA
TACCGCAGAGGATTTACAAAAGCTAAGCAAGCAAAACGACGCACGTGTTT
CATTCTATGCGCTGGGCTTGAAGGGGCAGCGAGACAATTTTTTCTGTTTT
ATCATGAGCACTGTAACAGCCCCTGTGTCCTCTGGACCGGCATATCCAAG
CCACCTGCCCTCTTCCACCACCTGCTTCTCCGACTCGTCATCTTCAACGG
ACAAGCATTCCCATGAAGACTCTCTTGATTCCAAGCGTTTCCAATCACAC
GTTCTCTTCCGCTGGATCAAGCCGGGCCAGGACGTGAGAGTCGTTGGGAG
CTGGAATGGATGGGGGAAGCCCTTAGACTTGGAGCGAACTGCCGACGCCT
TCAACCGCGGCCATCTCTTTTCCCGCATGGTCGCCCTCCCCGTGGGGTGG
CACCATTACAAATTCATTGTCGACGGGGCCTGGCAGTACGATCCGCTGTG
CGCCTTCGAAGCCGACGAGTTTGGAAATATCAACAATGTGGTGGAGGTAC
GGGGCGCTGAGGCCCAGGAGCTCGAGGTCCGGGGAAAGATGGAGGGAGAG
GAGGAGGAGGAAGGCGTGACGACGCCGGAGGAGGAGGAGGAAGACAGGCT
GCTGGACGACAAGCACCACCACCACCAGCAGGTGCTCCGCAGGCCGCGGG
TAGTGGATCCTCGGCATGCGAGCGAACCGACCGTGCCTTGGACGACCATG
TCAGGCGACCAGGCGCGTCGTAAGTGGCTGCACGCCTCGCGCGCCATGGA
GCGTCAGAGGCTTCAACGCAGCGACTCCATCGACGTCGTCATCGACGCCT
TATCCTCCCACGAGCGGCAGCAGATAAAGCAAGGCCTGCAAGAGTACGGC
TTGAAGACTTCCGGGACGGAGAGCACACCAGCCTTGTGGAAGTCCGCCTC
TTTGACCACTTTTGCCTCCGCCGAGGCCAGGGCAGGGACCGAATCCTTAG
CGGAGGTGGCTTGTGATGACCCTCTATCCCCCACACAAGGCGATTCCTGT
CAGGCCGCCGCCGGCTCCCTCAACCAAAAACCCTTCCAGTGCCGGGCCAA
CGCCCCAGTCGAGAATGCCCTGATCCGAGCGGAGGAGAGGGAGCTGCAGA
TTCAGCATGACCTCTCCAGCGCCCCGGCCTGTCCTCTCGGCACCGACTTC
CCTTCCTGTGCGCACCCACCGTCCAATTTCGCCCACGAATCCCATCAATC
TTCCCTGGAAGCGGGCGATGATAGCCTTGCTCCCTTGCCGGTGCAGAGGA
ATCTTTCTCGTCGTGGCTCCTACCTGGCGGCGTCTTTTCTGGGCAACGGG
GGAGCAGGTCTCCGCCTCACACGATCGAGGAGCCTCTCGGACCTGGACTT
GATGGGGGGGGAGTATCGGTGTGGCACATCTTCCTTCTTGGGCCAAGCCG
GACCACCGCAGGGAGGAGGCTTGCCCCGCCCCGGACGTCATAGGGACTTG
CAGGCGACCACGCTCCGCGCACTGCAGAAGCGACAGGCCGCGTGCTGCGC
GGCAGTGGGTTCCTGTCAGGTCAAGTCGTCGGTCCGGCGGGAGGGCAAGA
TGATCCTCGCCACGGTGGGTCTTCCTGGGCGGGGCAAGACGCACATGGCG
CGGGCCATCCGGCGGCATTTGGAATGGATGGGGATGCGCGTTGGCTACTT
CAATTCAGGGGAGTACCGCCGCAAGTCGGTGGGCACCAGGAAGATCTCGT
CGGATTTCTTTGACCCCACAGACGCGGAGGCATGGCAGTGCCGTAAAGAC
ATCGCCACCGTGGTCCTGCGGGACGTGCTCAGCGCCTTGAAATCTGACGT
CGACATTGCGGTGCTGGACGCGGCCAACTGCACTCAAGCTCGACGACGTT
GGATCCAAGAGAAAGTGCGGGAGTCGGGGTTGTACGCCACGGTTATTTTT
ATCGAGTCCATCTGCACCATCCCTGAGATCATTGCCTCCAACGTCCACCA
GACCATCCTCCGCTCGCCCGAGTACCGCGATTTGTCGGACGCGGAGGCGA
TGGCGGACTTTGAGCGGAAGAACCAACATTACCTGTCGATCTATGAGACC
TTGGAGGAGGAGGAGGATGTGCCCTTCCTGAAGCAAGTGGATGCGGGACA
GAAGATTGTGTCGTACCGGATCAATGGCTACATCCCGGGGCGCCTCCTTT
TGCTTTTGGCCAACATCCACACGAAACCTCGGCCCATCTGGTTCTCGCGT
CACGGAGAATCTGTATTCAACAGCCAAGGTAGAATAGGAGGAGACTCCCC
CTTGAGCGCCCGTGGCATCCTGTATGCGCAGAAGCTGGAAGAATTCGTGC
ACTCTGTCTATCGTCCCGACGACCCCGCGGACCGCGCCAACCCGAACCTG
ACTGTGTGGACTTCGACGATGCTACGAACGGGAATGACGGTGGCAGGGCT
GAATCAGAGTTGGGAGGTGATCAAATGGCGGTGTCTGGACGAGATCGACG
CGGGCATGTGCGACGGCCTTACCTACAATGAGGTGGCGGCCCAATTCCCG
GAAGAATACCGAAAGCGCAAGGAAGATAAGTACAATTATCGCTACCCGCG
AGGAGAGTCTTACCAGGACCTGTTCCTGCGGCTCGAGCCTTTATTGTTTG
AAATGCTGCGGCACACGGGCCCTCTGCTGGTTGTGGGCCATCAGGCGATT
TTGCGAATCTTGTATGGATACCTGACTGGCAAGCAGCCGGAGGAATGTCC
AGATCTACCGATACCGTTGCACACCGTCATACAATTGACGCCGCAGGCGT
ATGGCTGCGAGGAAGTCTGGCACACCCCGATGCCGGGAGGGGAGGACTTA
GTAGGGAGTGCAAATGGGCATAATTGATATCAGAACCATCAAATATGTTT
GATGGTTGAGCCAGGAGGAAAGTCTTTGTGAACATTTGGATCTTAAATGT
ACATGTCTATATTCCCATGTCGATAAGGACATACTTTCATAGGAATCAGC
AAGAATGCTTTGTGATCTTTTCGCTTGTAAGGTCTTGAAACGACGACAAA
TTTGCCGAAAGACTTCTACAATATTCTCAGTAATACTCCTTTGTGGCTCT
AAATATCCGACTACGATGTCCATAGGTCCACTTGGACATGAGGGGAAATT
TCGTGTACTGGAACAGGCACAGATTAGGTAGTTCTTTTTTAGATTGTTTC
ATTTTGTGCTTGAATAGATTCGGCTGTACCTTTCAGTCATGATTTTGGCG
GCAGAAACGATGTGTCGAAGAGGCGGGAGGGAGTTACTGCAATGTATTTT
ATTAGACCATCGTTTTGTGCCTGGTACGGGATCACAGGGAAACTCGGCGA
GGGAGAGCATCATCGGCTCATTAGTCGGTGAATGATCAACTCTTCCAATC
GAAAGGCTCCGGGTGCAAAGAATCGGGCTGTGTGAAAAAAATCAGAGATA
TGAATGTAGAGCAAGCACGGATGACTGATATTGACATCATCTTTCATGAA
TGCATCTGAGGCAAGCGGCATTAGTGTGAGACAATTCTCCCGCCTGCTTC
CGTAATTTCATAATTCTTTCGAACCTGTGCTCCCATACAGGAGCACACTG
ATTTGAGAAATTTTATTTCAAGTAAATCCATGGAAAAGTTGATGCGGAAA
GTGGAAGATGTTTGGTAGAATTATAATTTGCCAACAGAATGAATGAGTCA
GGCACGGAGCCGCATTCACCTTCTGACTGCTCTTTGACATTTCATTTCTT
CGGCAGATACTTCTAAGTATGTATACATGGTGACCTAGTG back to topprotein sequence of rna3100 >rna3100-protein ID=rna3100-protein|Name=rna3100|organism=Nannochloropsis gaditana|type=polypeptide|length=539bp
MDASHAPSFSSSSPETTQVVIHRDVYPCCILLYLTLPACYHAPLPSTKGI
IAGGRRLEGVQGDDKTSTNTARNLSATTKMIVITEKELTLLAGAGGLALY
AGKQGPKCPFHRMLFAASNLVLLGGGVYVLWRSWSQSPPAFWCSLQTVRK
KSRERLRGGKKARGEDAKHQDARVAAVLDLVRPNIWELEPYRCARDDYSE
GILLDANENSFGSALPPEDRVLELERYPDPYQQPLKEKIAVFRNVRPEQI
FVGVGSDEAIDLIMRVFCEPGRDQILVTPPTYGMYKVSAKTNDVGIVAVP
LTPEFAVRVPEVLQAVAVSPRVKVIFLCSPGNPTAKLVPLEVVEQVLQGA
SGCMVVVDEAYVDFANANAVSACQLVEKYPNCLVLQTLSKAFGLAGIRCG
MAIGHPAVIQVLNNVKAPYNVSQLTSHMAHKVFTAENLAVLQQNVSDILK
EKTRVVEALQGLPAVKKIHPSDTNFILFEVPRAQEIYRDMAEAGVVARFR
GHELHCKDCIRLTIGQAHENDTFLDLFKKTTEKYLGKYT back to topmRNA from alignment at CM002460.1:713925..715709+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3100 ID=rna3100|Name=rna3100|organism=Nannochloropsis gaditana|type=mRNA|length=1785bp|location=Sequence derived from alignment at CM002460.1:713925..715709+ (Nannochloropsis gaditana)
TGTGGCCATCCCCCCTTAGCTACGCCGTCGAGTCCATGTCTGAGGTACGG
ACTAAGGGGCCTTGCGCGGATGCATGGATGCGTCGCACGCCCCTTCTTTT
TCGTCGTCCAGCCCTGAAACCACTCAAGTTGTGATTCATCGCGATGTGTA
TCCATGTTGCATTTTATTATATCTCACTCTACCGGCGTGCTACCACGCTC
CTTTACCCTCAACCAAAGGGATCAttgcaggaggcaggaggctAGAGGGC
GTACAAGGTGACGACAAAACATCCACCAACACTGCACGCAATTTGAGCGC
CACCACGAAGATGATCGTGATAACAGAAAAGGAACTTACCCTTCTTGCGG
GTGCGGGCGGTCTGGCATTGTACGCGGGGAAGCAAGGGCCAAAgtgcccc
ttccaccgcatGCTGTTTGCGGCCTCCAACCTGGTGCTGCTGGGCGGGGG
AGTCTACGTTTTGTGGCGTTCCTGGTCGCAGTCTCCACCGGCATTTTGGT
GCTCTTTGCAAACAGTCCGGAAGAAGAGCAGAGAGCGGCTAcgcggggga
aaaaaggctcggggagaggatgcaaaGCATCAGGACGCCCGGGTGGCGGC
AGTTCTCGACTTGGTGCGACCTAACATTTGGGAACTAGAGCCGTATCGAT
GCGCGCGGGACGACTACAGCGAAGGAATTTTGCTGGACGCGAACGAGAAC
TCGTTTGGATCGGCCCTGCCGCCCGAAGACCGTGTCTTGGAATTGGAGCG
GTATCCTGACCCCTACCAGCAGCCTTTGAAAGAGAAGATAGCGGTGTTTC
GAAACGTCCGTCCGGAGCAAATTTTCGTCGGGGTGGGGAGCGACGAGGCC
ATCGACTTGATCATGCGCGTTTTTTGTGAGCCCGGGAGGGATCAGATTCT
CGTCACCCCCCCCACGTACGGCATGTACAAGGTGTCCGCCAAAACCAACG
ACGTGGGCATCGTCGCCGTGCCCCTGACGCCGGAATTTGCCGTCCGGGTG
CCCGAGGTCCTTCAGGCGGTCGCTGTCTCTCCGCGCGTCAAGGTCATTTT
CCTCTGCTCGCCGGGCAATCCAACAGCCAAGCTCGTGCCCTTagaggtgg
tggagcaaGTGCTGCAAGGCGCCTCGGGCTGCATGGTGGTCGTGGATGAG
GCCTACGTTGATTTTGCGAACGCGAATGCGGTGAGTGCCTGTCAACTTGT
GGAGAAATACCCGAACTGCCTCGTCCTGCAGACCCTTTCCAAGGCCTTCG
GTCTGGCAGGCATCCGGTGCGGCATGGCCATAGGACACCCGGCGGTCATT
CAGGTTCTGAACAATGTCAAGGCGCCTTACAACGTGAGCCAGCTCACCTC
CCACATGGCCCACAAGGTTTTCACTGCTGAGAACCTGGCGGTGCTCCAGC
AGAACGTGAGTGACATACTAAAGGAGAAAAcgcgggtggtggaggccctg
cAAGGCCTGCCTGCAGTGAAGAAGATCCATCCTTCGGATACAAATTTTAT
TCTCTTTGAAGTGCCGCGGGCTCAGGAAATCTATCGAGACATGGCTGAGG
CAGGGGTCGTTGCGCGGTTTCGGGGCCACGAATTGCATTGCAAGGATTGC
ATTCGTCTGACCATCGGCCAGGCCCACGAGAACGACACATTTTTGGACCT
TTTCAAGAAAACCACAGAGAAATACCTTGGCAAGTACACATAAGAGTGAG
TAGTGCGACGGGTCATCTACTAAACAAGAGGACACTTGAGACACGTACCC
CACCAATTGCAGCCCGACCAGTAGGGCCTTCTTGC back to topCoding sequence (CDS) from alignment at CM002460.1:713925..715709+ >rna3100 ID=rna3100|Name=rna3100|organism=Nannochloropsis gaditana|type=CDS|length=1620bp|location=Sequence derived from alignment at CM002460.1:713925..715709+ (Nannochloropsis gaditana)
ATGGATGCGTCGCACGCCCCTTCTTTTTCGTCGTCCAGCCCTGAAACCAC
TCAAGTTGTGATTCATCGCGATGTGTATCCATGTTGCATTTTATTATATC
TCACTCTACCGGCGTGCTACCACGCTCCTTTACCCTCAACCAAAGGGATC
AttgcaggaggcaggaggctAGAGGGCGTACAAGGTGACGACAAAACATC
CACCAACACTGCACGCAATTTGAGCGCCACCACGAAGATGATCGTGATAA
CAGAAAAGGAACTTACCCTTCTTGCGGGTGCGGGCGGTCTGGCATTGTAC
GCGGGGAAGCAAGGGCCAAAgtgccccttccaccgcatGCTGTTTGCGGC
CTCCAACCTGGTGCTGCTGGGCGGGGGAGTCTACGTTTTGTGGCGTTCCT
GGTCGCAGTCTCCACCGGCATTTTGGTGCTCTTTGCAAACAGTCCGGAAG
AAGAGCAGAGAGCGGCTAcgcgggggaaaaaaggctcggggagaggatgc
aaaGCATCAGGACGCCCGGGTGGCGGCAGTTCTCGACTTGGTGCGACCTA
ACATTTGGGAACTAGAGCCGTATCGATGCGCGCGGGACGACTACAGCGAA
GGAATTTTGCTGGACGCGAACGAGAACTCGTTTGGATCGGCCCTGCCGCC
CGAAGACCGTGTCTTGGAATTGGAGCGGTATCCTGACCCCTACCAGCAGC
CTTTGAAAGAGAAGATAGCGGTGTTTCGAAACGTCCGTCCGGAGCAAATT
TTCGTCGGGGTGGGGAGCGACGAGGCCATCGACTTGATCATGCGCGTTTT
TTGTGAGCCCGGGAGGGATCAGATTCTCGTCACCCCCCCCACGTACGGCA
TGTACAAGGTGTCCGCCAAAACCAACGACGTGGGCATCGTCGCCGTGCCC
CTGACGCCGGAATTTGCCGTCCGGGTGCCCGAGGTCCTTCAGGCGGTCGC
TGTCTCTCCGCGCGTCAAGGTCATTTTCCTCTGCTCGCCGGGCAATCCAA
CAGCCAAGCTCGTGCCCTTagaggtggtggagcaaGTGCTGCAAGGCGCC
TCGGGCTGCATGGTGGTCGTGGATGAGGCCTACGTTGATTTTGCGAACGC
GAATGCGGTGAGTGCCTGTCAACTTGTGGAGAAATACCCGAACTGCCTCG
TCCTGCAGACCCTTTCCAAGGCCTTCGGTCTGGCAGGCATCCGGTGCGGC
ATGGCCATAGGACACCCGGCGGTCATTCAGGTTCTGAACAATGTCAAGGC
GCCTTACAACGTGAGCCAGCTCACCTCCCACATGGCCCACAAGGTTTTCA
CTGCTGAGAACCTGGCGGTGCTCCAGCAGAACGTGAGTGACATACTAAAG
GAGAAAAcgcgggtggtggaggccctgcAAGGCCTGCCTGCAGTGAAGAA
GATCCATCCTTCGGATACAAATTTTATTCTCTTTGAAGTGCCGCGGGCTC
AGGAAATCTATCGAGACATGGCTGAGGCAGGGGTCGTTGCGCGGTTTCGG
GGCCACGAATTGCATTGCAAGGATTGCATTCGTCTGACCATCGGCCAGGC
CCACGAGAACGACACATTTTTGGACCTTTTCAAGAAAACCACAGAGAAAT
ACCTTGGCAAGTACACATAA back to top
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