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Properties
| Property Name | Value |
|---|
| Product | amino acid transporter |
| Orig transcript id | gnl|cribi|Naga_100256g2.1472.mrna |
| Orig protein id | gnl|cribi|Naga_100256g2.1472 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:595496..597683 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3060 ID=rna3060|Name=rna3060|organism=Nannochloropsis gaditana|type=mRNA|length=3937bp
CTGCCTTACGCCCGCGATTCGGCCTCAACGCGCGCGTTTTTGGCTGCGTA
CCGCGACCCCATCGAGCAGGAGGCAGGGTCCTCGCCCCCCCCCATCGGAG
CCGTCTTCTGCCACGTGGATGTCCGTGGCGCTCCTATGAATGACAACACC
GCCTCTCGCCGGGGTCTGAATCCAGGAATTTTTCCTTCCCACGTCCCCAC
CTACTCCGGACACTTCCATAGACCCCACCGGGTGCCCGCTAGCCCGGTTA
CCTACGTTGGGTCGCCCTACCAAGTGAGCCTGGCGGAGGCCGGTCAAAGG
AAACGCTTGCTCCTCCTCCGTCGACCCCTCGGGCCAGGTGACCCCTGGAC
GGAAGTATCCGATATAGCCATCGATGTGGGTCGGCGTTACTTTCGCCCCC
GCAGCCTTGATGCCGCCCAGGACCTGCTCTCCGACCACTGCCTGCGGAAA
GGCGATCGGGTGGTTCTGAACCTCTTACCAGCAGCAGCCGAGACGTTGGC
CAGCGAGGTAGAGGGGCTCCGAACGCGGCTGCGGGCGAGTGTACAGGCAG
AACTGGAAGTCAGGGAGGGCATGATAGAGGCGGACGAGGCGGGCTTCATG
GCTGGTCTGGATGGGGCGATGGAGAGCGCTCCCGGGGGGGTAAGTCTGGA
GTCAGGGATAATGGACTACGAGACCTTAGGCACGCCTGCGGTTTGGCGGG
CTTACATGGCCGAAGCAAGTTTTGGGGATGCGAGCAGCAGCAGCGGCGGG
GGCAAGGGTCAGCAGAAGGTGATAGGTGAGGGCCTGGAACTGATTGAGGC
GTGGGAGTCGTCGACCGGCCAAAATGTAATGAGCCCTACCGCCCATACAG
CGCCTGCAACGCCCACCACCGTGGGAGGCGGCTCGACGGGGGCGGTGCGC
TTAGAATTCAAAAAGGTCAAAGCCGTTGGCTACGGCCCATTCTTGAAGGC
GGTGGAGTATCCTCTGGAAACCCGAGGGCTGGTTCTGTTGCGAGGCAAAA
ACATGGACGATCCGGGCGCTGAGAGCAACGCCGCCGGGAAATCGAAACTG
GCGATGGCAGCTCAGTGGGCTTTGACAGGCGACGGGGACGAGAAGCCAGT
CATGGACGCCAAGGTCACAGACGTAGCCTTTGACGTCTCTTCCCGCGGGA
AAGCCGCCTTTGCGGAGGTGACGCTGTGGGGGAGCGTGAACGACCTCCCC
TTCCAGGTGACGCGCAAGAGAGGATTGAAGACAAACCAGCTCCGGTTCAT
GCTCAACGGCGAGGACATGACACGGCAGACAGCCCGAGACACTCAGCGCG
GGATTGAGGAGGCCTTGGGCCTGGATATGGACTTCTTGAGCCTTGCCATC
TTTTGCGGACAGCACCAGATGAATGGACTACTGGAGGCGACCGATGTCAA
GCTCAAGGAGCGGCTTTCCAAAATCGTGAGGCTGGGGGTGTGGGAAGACA
TAAAGGAGAAGGCCAAGGCTGGCGCCAAGAGGTACCAGGAGGAAGGTCTG
CATGCACAGACTCAGGTGAGAGTGTGTGAGTTGGACCTGGAGCGGCAAGA
GCTGGAAGAGGTCGAGCTCATGGAGGCTTTGTCGCCTCCGTCGGGTATCG
AGGCCGGAAACGTGAGCGGCGTGGGAGCCAATGTACAGTTGCTGGGCGGG
ACAGTGCGCACACTGGATCAAGTGGAAATGGAACTGGGATTTTTAAGCAG
GCAAGTGGAAGAGGCACAAACGGCTTGGAAGGAGTGTCTAGAACGACGAA
AAGAGTGGGCAGAGGGACAGGCCCAGGCTGGGCAGGCCGACGGGATCCGG
AGGGAGCGCTTGCGAACACTCCAAAAAGGGATCGAAGAGGACGAAAGGGC
GATCGCAGGCCTGCAAGATCGATGGGATCCATCCACTTACTGGGCAGAGA
TGCAGCGATGGGGGGTAATTCCTGCGGACGCAACAATGGACCCTGATTCG
GGGCTGGCATTTGCTGCCCATGTGCCGGCGCAAAGCTGGGAAGAGAAGCT
CATTGCAGTGGAAAGCGCGCACGCCACGTGCCTGGCCGAAGTGGGGGCTG
CGACGGGGGACTTGCGAAAAGTCGAGGGGGCCTTGGAGTCTCTTTCTACG
GGAGTGAAGGTCTCTCGACCGGGGATGGCGGGGACGGACGCGAAAGAGGA
AGCGGATGGGTGTCCTACGTGTGGGCGTGCCTGGGACGAGGGCGACACCG
ACGCCAAGTCCAAGGCCATTGCGCATGTACAGGGAGAAATAAGCAAGCAC
CGGGCCACGCTGCAAGAGAGCGAGGAAAGGAAAACTCGGCTGCAGAAACA
AAAAGCCTTGCTTTCGCGTATGGTGGAGGCTCATGTGGAATATCTTCGCG
ACGTGCAAGCTTGGCAAAGTGCGTGCCAGCGTCTTCGGTCCCGAGGTCAA
GAATTGATCAAAGTGGAGGAAGAAATAGCAAAAGGCACGATTCCAGTGTG
GGAATCGAGCGACAAAATACAAAGCACCCAACCTGTGGACGAACTGGAGG
CGCGGGAACATGAATTTCAGGAGCTGCAAACGCGAATCAACAAGCTTCAA
GAGGAGCGACCCCTTCTGATCAAGCAAGCCGCCGAGCTTCAGGCTCGAGA
ACGAGAGACTGCAGAACTTCGCAAGCGCTTGGAGAGAAAAAGAAGTGAAC
TGACCAAGGCCAGGGAACGCCTTGAGGCCGCGCGTAGTCTTCATGTCGAG
CAAGAAGAAAAGGCACGGCTGTACAGGGAGCTTGTCGACAGGTTTGGTAT
GCGCGGTATCCAGGCATTTGTATTGCGTGGGGCAGTGGCCCAACTTGAAC
GACTGGCCAACCATTTTCTGACGGTGTTATCGGAAGGGGGACTCCGATTG
GGCTTATCTTTGGAAGGGGAAAGGATCTCGAAAGAAGTCAAGGTCCGGGG
TGGGGATGGCGTCTTTCATGATCGGACTTTGTCTCATTTGTCGGGAGGAC
AATGGAGACGAGCAAGTCTTGCGGCGTTGCTGGCTTTCCGAGAGTTGAGT
CGATTGCGGTCGCGCGTTGATTGCAATTTGATCGTTTTGGACGAAGTCCT
CAATCATTTGGACGGGGCGGGTAGAGCACGCGTAGGCAAACTCCTACGGG
CTATGGTTCAAATCGAAGGAGATGAAGGACAGGAACAAAGTACTGCTGCA
GGAACACAAATGGGAGGGAAATCGGCACGTCCGGGGTTACAAACTGCGAT
CGTCATTCTGCAGGACTCGGCGGCAATCGAACTGGAGGATACATTCGACT
CCATCGACGAGGTCGTGAAGGAGGGGGACGTGAGCCGAGTGGTTTTGGAT
GAGCGACTTGAGCAATATACACAAGGAAGTGAACCGCAATTTCTCGCGTT
CGAGGAAGATGGTAGGAAGGATGAAGTGGTGCGGACAATGACAGAAGACA
TGGACTCTAGGGATGCTGGCCATCCATTTGGCGACCGCGACTATTACGTT
GTGGATGTGGATCAACAGTCACGTGACGGATGCTTTTTCAACTCGACAAA
TGCCCCGCCCGCACATGACGATGAGTACAGTAAGGTGCAAAAACCTGCTA
AGGACAAGAAAAAGCAGCAACAGGAACACACCACGGAGATAGCCACCCGT
GTGGTCAAAGGCGGCTGGTTAGATGGGATGGAGGAGATTGCCATAAAGTA
AAGCAACTTGGTCCGATTGTATATTTCAGGCTTTGATGTACAACACTTAC
AAAAGCCAAAAAGTAGAAAGATAGGCGACGCGGTCCTCGCAAATGAAGCG
ACTATTGCTATTCATTTTCGTCTTACATTGTATATATACATGACTTTTCG
CGAACCGCTATTCTATAAATGGAGTGCTTGAACCGTTGTACGCTTCCACA
TGCAGTCATGCGCGAGCTTGCAAGAACTCATTGAGCCAGTTTTCCCAAAG
AACATAGATGGTGTTCTCTGTACGCTCATTGAAACGC back to topprotein sequence of rna3060 >rna3060-protein ID=rna3060-protein|Name=rna3060|organism=Nannochloropsis gaditana|type=polypeptide|length=505bp
MLNEALIETTPQRGRDVKPNKPPSQDSKGLLQDRHTGQAKRTNDLCAYSQ
DELAAEEEYTQIWEGTVPPYGLQLPRSTSVPYMLVKVDTGMNGLESGSGL
KKSMDLKRAIDTPPPHTLQGVTRTAIAFTRSMIGTAALYMPRMFYTGGLA
FSTATLIGACFISTYSIILLSRAHDRCPGTKSYGDVAYRAWGRPGKWLVD
FLLALNQISWVPVYFLFVQQNLVQAIPGLDRLVSREGLIAIQLLIYVPLS
WLRHIKYLATANLVANIFVGVGLVACLVWSCTVLATDGPAPGIHMFNRAS
CFLFLGSVAVAFEGMSLVLPIKRSMKRPERFEALVATSMAGLCVLVWSIG
AMGYLAFGNSVEPFVTNELPTQGVLGPAVRIMYSLAIICTYPLQLFPGTI
ILEEYLVEPMGLVPSRRKVAKNVLRLLVVLGTCLTAIYAGKALDHFVALI
GTVGSLPLGLMLPTLVHLCLFWGTTSVRMRVFHVFLVMLGCLAIILSFSI
TISTW back to topmRNA from alignment at CM002460.1:595496..597683- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3060 ID=rna3060|Name=rna3060|organism=Nannochloropsis gaditana|type=mRNA|length=2188bp|location=Sequence derived from alignment at CM002460.1:595496..597683- (Nannochloropsis gaditana)
TGGTTGCATGTCCAGTCCCATAGCAAGTCGATCGAAACCATGTACGTGCC
GGTACTCCGCACCTTAGGGAGCGAACATGCGAAGACCTGATGGCTGCATC
GACGTCACTTTGATGTGGGGGATAAGTTTCGTGGCGATGTAAAGGAGGGA
GAGGCTAGGGGAGGAATTAGCTCTGAGAGCGCTTGCGATAAAATTCCTTA
GCAGACTGCAAGAGCGTGCCTCCGGGAAAGTAATTTGCGCGACTATCCGG
ATTCATCTTATCATGCGTACAAATGCACATTGATAATTCCATGTACAAAT
AACAAGGCGAGGAAGGTGTGGCCTCTGCGGCGGCAAAAATGCTAAATGAA
GCCTTGATCGAGACGACCCCTCAGCGTGGGCGGGATGTCAAGCCGAATAA
GCCACCTTCTCAAGACTCGAAGGGCCTGCTTCAAGACAGACATACAGGGC
AGGCAAAAAGAACAAATGACCTTTGCGCATACAGTCAGGACGAGTTGGCG
GCAGAGGAAGAGTATACGCAGATATGGGAAGGCACAGTTCCTCCCTATGG
CCTTCAATTACCCCGCTCGACGTCTGTTCCGTACATGCTGGTCAAGGTGG
ATACGGGCATGAACGGGCTAGAGAGTGGCTCAGGATTGAAGAAGTCCATG
GATCTGAAACGTGCCATAGACACGCCGCCTCCACACACTTTACAAGGGGT
CACGCGGACAGCAATCGCCTTCACGCGCTCCATGATCGGCACGGCCGCAC
TCTACATGCCGCGCATGTTCTATACGGGAGGACTCGCCTTTTCGACGGCC
ACCCTGATTGGGGCATGTTTTATCAGCACCTATTCCATCATTCTCTTGTC
CCGGGCGCACGACCGCTGTCCTGGGACCAAGTCGTACGGCGATGTCGCCT
ACCGCGCCTGGGGCCGTCCAGGCAAGTGGCTCGTGGATTTCCTGCTCGCC
CTCAATCAGATTTCCTGGGTCCCCGTCTATTTCCTTTTCGTCCAGCAGAA
CCTCGTGCAAGCCATTCCTGGTCTGGACCGCCTCGTTTCCCGTGAGGGCC
TGATTGCAATTCAGCTTCTCATCTACGTCCCCCTCTCTTGGCTCCGACAC
ATCAAGTACTTGGCGACTGCCAATTTGGTGGCCAATATTTTTGTGGGTGT
GGGCCTGGTTGCGTGCCTTGTCTGGTCCTGCACGGTGCTCGCGACGGATG
GCCCTGCCCCTGGCATTCACATGTTCAACCGCGCATCCTGCTTCCTCTTC
CTGGGCTCGGTGGCCGTTGCATTCGAGGGCATGTCCCTGGTCTTGCCCAT
CAAACGGTCCATGAAAAGGCCGGAACGCTTTGAGGCCCTGGTCGCGACGT
CGATGGCGGGGCTTTGCGTGTTGGTGTGGAGCATAGGTGCCATGGGCTAC
TTGGCCTTCGGGAACAGTGTGGAGCCCTTTGTGACGAACGAACTTCCCAC
TCAGGGAGTGCTGGGGCCCGCCGTTAGGATCATGTACAGTCTGGCCATTA
TTTGCACGTACCCCTTGCAGCTTTTTCCGGGAACGATCATCTTGGAGGAG
TACCTGGTGGAGCCGATGGGGCTAGTGCCCTCGAGGCGGAAAGTGGCCAA
GAACGTGTTGCGCCTCCTGGTCGTGTTAGGCACCTGTCTGACAGCCATCT
ACGCAGGGAAGGCGCTCGACCATTTCGTCGCCTTGATTGGCACGGTCGGA
AGCTTGCCGTTGGGGCTGATGTTGCCCACACTGGTGCATCTGTGTCTTTT
CTGGGGGACAACGTCGGTGCGTATGAGGGTTTTCCACGTGTTTCTGGTCA
TGCTAGGCTGCCTAGCGATTATCTTATCCTTCAGTATCACCATCTCCACG
TGGTGAGTAGTGTTATGGAAAGAAATAGTGATCAGTGTGAAGACAGCAGG
GGTGAGGTGCGTCACTCAATTATGCGTAGGCGTTTCAATGAGCGTACAGA
GAACACCATCTATGTTCTTTGGGAAAACTGGCTCAATGAGTTCTTGCAAG
CTCGCGCATGACTGCATGTGGAAGCGTACAACGGTTCAAGCACTCCATTT
ATAGAATAGCGGTTCGCGAAAAGTCATGTATATATACAATGTAAGACGAA
AATGAATAGCAATAGTCGCTTCATTTGCGAGGACCGCGTCGCCTATCTTT
CTACTTTTTGGCTTTTGTAAGTGTTGTACATCAAAGCC back to topCoding sequence (CDS) from alignment at CM002460.1:595496..597683- >rna3060 ID=rna3060|Name=rna3060|organism=Nannochloropsis gaditana|type=CDS|length=1518bp|location=Sequence derived from alignment at CM002460.1:595496..597683- (Nannochloropsis gaditana)
ATGCTAAATGAAGCCTTGATCGAGACGACCCCTCAGCGTGGGCGGGATGT
CAAGCCGAATAAGCCACCTTCTCAAGACTCGAAGGGCCTGCTTCAAGACA
GACATACAGGGCAGGCAAAAAGAACAAATGACCTTTGCGCATACAGTCAG
GACGAGTTGGCGGCAGAGGAAGAGTATACGCAGATATGGGAAGGCACAGT
TCCTCCCTATGGCCTTCAATTACCCCGCTCGACGTCTGTTCCGTACATGC
TGGTCAAGGTGGATACGGGCATGAACGGGCTAGAGAGTGGCTCAGGATTG
AAGAAGTCCATGGATCTGAAACGTGCCATAGACACGCCGCCTCCACACAC
TTTACAAGGGGTCACGCGGACAGCAATCGCCTTCACGCGCTCCATGATCG
GCACGGCCGCACTCTACATGCCGCGCATGTTCTATACGGGAGGACTCGCC
TTTTCGACGGCCACCCTGATTGGGGCATGTTTTATCAGCACCTATTCCAT
CATTCTCTTGTCCCGGGCGCACGACCGCTGTCCTGGGACCAAGTCGTACG
GCGATGTCGCCTACCGCGCCTGGGGCCGTCCAGGCAAGTGGCTCGTGGAT
TTCCTGCTCGCCCTCAATCAGATTTCCTGGGTCCCCGTCTATTTCCTTTT
CGTCCAGCAGAACCTCGTGCAAGCCATTCCTGGTCTGGACCGCCTCGTTT
CCCGTGAGGGCCTGATTGCAATTCAGCTTCTCATCTACGTCCCCCTCTCT
TGGCTCCGACACATCAAGTACTTGGCGACTGCCAATTTGGTGGCCAATAT
TTTTGTGGGTGTGGGCCTGGTTGCGTGCCTTGTCTGGTCCTGCACGGTGC
TCGCGACGGATGGCCCTGCCCCTGGCATTCACATGTTCAACCGCGCATCC
TGCTTCCTCTTCCTGGGCTCGGTGGCCGTTGCATTCGAGGGCATGTCCCT
GGTCTTGCCCATCAAACGGTCCATGAAAAGGCCGGAACGCTTTGAGGCCC
TGGTCGCGACGTCGATGGCGGGGCTTTGCGTGTTGGTGTGGAGCATAGGT
GCCATGGGCTACTTGGCCTTCGGGAACAGTGTGGAGCCCTTTGTGACGAA
CGAACTTCCCACTCAGGGAGTGCTGGGGCCCGCCGTTAGGATCATGTACA
GTCTGGCCATTATTTGCACGTACCCCTTGCAGCTTTTTCCGGGAACGATC
ATCTTGGAGGAGTACCTGGTGGAGCCGATGGGGCTAGTGCCCTCGAGGCG
GAAAGTGGCCAAGAACGTGTTGCGCCTCCTGGTCGTGTTAGGCACCTGTC
TGACAGCCATCTACGCAGGGAAGGCGCTCGACCATTTCGTCGCCTTGATT
GGCACGGTCGGAAGCTTGCCGTTGGGGCTGATGTTGCCCACACTGGTGCA
TCTGTGTCTTTTCTGGGGGACAACGTCGGTGCGTATGAGGGTTTTCCACG
TGTTTCTGGTCATGCTAGGCTGCCTAGCGATTATCTTATCCTTCAGTATC
ACCATCTCCACGTGGTGA back to top
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