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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100059g28.8043.mrna |
| Orig protein id | gnl|cribi|Naga_100059g28.8043 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:563954..567977 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3049 ID=rna3049|Name=rna3049|organism=Nannochloropsis gaditana|type=mRNA|length=1690bp
CCGACCGAGGGCGCGTTCATCTGATTTATCGTTCCTGCACGTCTTCTGTC
TTTGTACCACATAGTTTAACCCTTCAACCATCAACAGGTTCATTTTCACT
TCGCTGTTGTACATGCTACGTCAAAATGCGCACGAGTGGGGCCCCAGCTG
GTTCCTTGCCTTCACATCAACCTCATACACACCCCTCCTCTGGTGCACCG
TGTCAGTGGGCACAATTTAAGTCTGCACTACATTCTGACCGGCCTTTTGA
GTATGGCTACTGGCTATCGGTTGGTGTATCTACACTTTTCGACTGGGCAG
TGCGAGCTTTGGGCCCGTGCTTGGTCACTCTTGCCTGCCTTTTGATCGGC
CTTGTCACATGTCTCTACTTTGGCTACATCCTTCCAGAGCTCGTGGGCTG
CAGAGGAAAAAGCGGCTCTGGCGTTGAGGATCCAGATGTCCGGTACTTAT
GCCTCGCACGTGTAATACACGGAAGCTGGGCAGCGTTTCTGCTGTTTAAC
ACGCTGTTCAACTATTTCCATTGCGTCATGACCTCCCCTGGTTCGCCCTT
CGTCAATGCGTGTGATGCCTCAATGCACTCCCATGGCGAAATCCAGGCTC
CGTCTGTGCATGCCAATGCAGGCACTCCCACAGATTCACATTCACCACTT
CACGTCTCCTCTGCCCGTAGCGACCATGTGGATGCACGCACGTATGGATT
CTGTAAAAAATGCCGTACACCCCGCCCTCCCCGCACCCACCACTGCCACG
TCTGCAAGTCTTGTGTCCTCAAAATGGATCACCATTGCCCATGGATCGGA
CAATGTGTCGGGTACTACAACTACCGTTATTTCGTACTATTCATGATGTA
CCTGTGGGCAGCGTGCGTGTATGGCGCCCTCCTGCTCGGTCGGCCATTTT
TAGACATGATGTACGGCAGCAGTCAAGGTGGCGGGCCCCGAATGCCTGTC
ATCGTGGGGTCCCTCGCCTCTGCGCGCTCCGCTATTATCCTTACATTTGT
TTTGGCCTTCTCCGTTGGGCTGGCGCTGACAGGCTTGTTGGGTTGGCACG
TTTTTCTCATCACGACCGGGCAGACGACCATTGAATTTTACATTAATAAG
GCACGGAGGGAGCGAGCCCGACAACGAGGGTTTTTGTACACCAACCCTCA
CGACTTGGGGTCACGACAGAATTGGCAGCAGGTATTTGGGCGTGATTTGC
CTTGGTGGAGATCTCTCCTCCCCTCGACGCGGTTGCCGCCGGCGCCCGGG
GTCGGGCCGGGAGGGCCGGACCCCGGACAGGAAAAGGCGGGCGCCGAGCC
GAGAGAGGAGGCATGGTGGGCGGAAGAGCACCGGCTGTCAGCGATGGAGG
AGGGGGAAGAGGAAGAGGAGGAGGAAATGATAACGTGTGACGGCGGAGAG
TGTGCAGTTCTTGGAGAAGGGAAGAGGGGGAACAGAAGGAGAGGAGGGGG
GGCGGCCGTTCCTGCGAAAAAATGGAAGCGGAATGGGAGTCGCATGATTT
TTTCGGGTGTAGAACGTCACACCCCTCCGGTGATTGTCTAGCACCCCTGA
AAGTGTACGTTTAAAAGACTTGAGATGCGAGATAGAAGGCAGGCAGCGTG
CGGCACACGGACGGCCCACATGACTGACCTTCGGCATCGCTTTCAGCAGA
CATGTGAAAGTTCCAAGCCAGCTATAGATCCTTTTTGCAC back to topprotein sequence of rna3049 >rna3049-protein ID=rna3049-protein|Name=rna3049|organism=Nannochloropsis gaditana|type=polypeptide|length=628bp
MHREARFPTLRLPPRNAGAAPTGTGRAGGVAKGISPDDHLLDALLLLPRG
HELGHARLPAGSPWASRASEPRAQPPLGRAPRAPPPRASRWSVAAFWLRP
SSPGPVRPARLLLSSSRLPPRGPVPSPFLPPFVLLLRRAQDWRPLFLPLR
HPERQQRRLRPARELALSALPSPANVAPLVGRTDAAPSLPPPPPHDIIGG
PALGPAVPMFGGSGRGSDPFQACGPGAQPPPSLGALRIHSGSGRSSSLGS
NSSHGGSMGSEGSGSGSDDGETGTRRGPAHRAPGMRVPVPGLPPYAVERC
PTPTERGQGKASNAFRSSKRTAEGEEKSEPGFDRKDIFIPSVQGRHQTAH
EDYGRGPASVPPRRSLSTNNVALMQEASSAAASAAAAAAEEAGDDDHARL
LSRYRHARSSSEPRDRFQGARAVHRQHQQAPHPHYQGEKGREGRTLGQAG
SPLPANHNEGELLLDFLITVRRQHQEMAQSTSSSSKCGSGDDEDSPRTSR
DGSSPSSALSSSCGDGNDSSGSSGSAEGGEGGARGWHAGKDTAYKTCSGN
EDEEDGAVERKNVPNSRPRAQTGHHGGIPRSDSPARHGGEPVTAVVANGA
SVEMSTEALGTTSAPPLKKARSYESFRI back to topmRNA from alignment at CM002460.1:563954..567977- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3049 ID=rna3049|Name=rna3049|organism=Nannochloropsis gaditana|type=mRNA|length=4024bp|location=Sequence derived from alignment at CM002460.1:563954..567977- (Nannochloropsis gaditana)
CGTCCTTGAGGCAAGCGCACTTCCACTACTAGGGCAAGATTTGGTCGAGC
ATTGAAACCTTTTCACTTCTATTTGTCGTCTTGCTATGTGTTCCAGACAT
GCCGTGGCCCTATTCTTAACCTTGCGTTGATGTCTCACGCAGGCCTTTTT
TCAAAACCTGGACCTTGGCAGGCAGCAAACAAGGCGATCTTTCTCTTCTT
CGACGCGTCGAAGTTTGAGCGCGATCCCGGAGGGGAAAACGCCGGAGTGC
AAGAAGCAAACTTAACTAATGAAGACCTCTGTCGTGAACACGGGAAGGCG
GCCAAGTGGTCGTGCACGTGGGGAAGGAGAGAGAAATCACTTCACCGCGA
AGAGGGAAGACGGGGAGGAAGAGGAGGAGGACCTGAGCATGGAGAGTTTT
GAGAATGAGATGTCTCATAAAAAGCAGCCACACCATTACAGCAGCAATCA
GCAGTCCAAGTCATTTGCAAGTAAGGCATCATGTGCTTTGATAGGAGGGG
AAGCGGGGCAAGGGTAGGAGGGAGTTGTCTTGGAATGTGTCGATATGGAT
CTGTTGTAAAATTTAGCGTGTCATGCATGAAGACCTGAACTCTTATTGAG
ACACTACGGCTTTAAAATACACAACTACAGAGGATGACAGCCGCACGGAT
AAAGACGATGATAGCAGCAGCATAAGCTCCTGCGACTCCACGGATGAGGA
CAGTATGGTGGTCGCCCGGGCAAGGCCGCCGAGCCTGACTCCGCTACGCC
GGCCGGGCAGCAAGGAGGACACCCGCCGCCTCCACCAATGCAAGGCTCAA
AGCACGTCTCGCTCGCACGCGTCCATGCCCCAGGCGAGCAGCAAGGCCGC
TGCGTCCTCGGCGACAGGGACGTCTGGGGGGCCTCGCCCTCCCTTGCGCC
GGGGCAAGTGGACCTTCCAGGAGGAGGCCTACGTGTCACGCATCATCTAT
GACTTCAACCACGGCCTTCTCCCCCTGGCTGCCGGCACCACGCTGCGGGC
ATACCTCTCGGACACCCTGAACTGCGACCCCATGCGGATCACGAAGAAAT
TTGCAGGGGCGGCATGCATAGGGAAGCGCGTTTTCCAACCCTGCGACTCC
CACCCCGAAACGCTGGAGCGGCGCCGACGGGCACAGGCAGAGCTGGAGGT
GTTGCGAAAGGAATTTCTCCGGACGACCACCTCCTCGATGCTCTCCTCCT
CCTACCACGGGGGCACGAGCTTGGTCATGCCAGGCTTCCCGCCGGGTCAC
CCTGGGCCTCCCGGGCAAGCGAGCCACGCGCCCAACCACCACTGGGGCGG
GCACCACGAGCACCTCCACCAAGAGCCAGCCGCTGGTCTGTCGCAGCCTT
CTGGCTACGGCCCTCCTCTCCCGGCCCCGTACGCCCCGCCCGGCTACTCC
TATCATCCTCCCGCCTCCCACCCCGAGGGCCTGTCCCCTCCCCTTTCCTC
CCACCCTTCGTCCTCCTCCTCCGGCGGGCCCAGGACTGGAGACCTCTCTT
CCTACCACTACGGCACCCCGAGCGGCAACAACGTCGCCTCCGACCCGCAC
GCGAACTGGCGCTCAGCGCACTCCCAAGCCCCGCAAATGTCGCACCACTC
GTGGGGCGCACCGATGCAGCCCCCTCCCTGCCCCCCCCCCCCCCGCACGA
CATCATCGGAGGACCCGCTTTGGGGCCGGCGGTGCCCATGTTCGGGGGGA
GCGGAAGAGGATCCGATCCTTTCCAAGCCTGTGGGCCAGGCGCCCAACCC
CCGCCCTCCCTTGGGGCACTGCGCATCCACAGCGGGAGCGGTAGGAGCAG
CAGCCTTGGCAGCAACAGCAGCCATGGCGGGAGCATGGGCAGCGAAGGGA
GCGGAAGCGGCAGTGATGACGGCGAGACGGGTACGCGCAGAGGCCCCGCG
CATCGGGCCCCTGGCATGCGCGTGCCAGTGCCGGGGCTACCCCCCTATGC
CGTGGAGAGATGCCCGACTCCCACGGAGCGCGGTCAAGGCAAGGCCAGCA
ACGCTTTTCGAAGCAGCAAGCGGACGGCGGAGGGGGAGGAAAAGTCCGAG
CCTGGCTTCGATCGTAAGGATATTTTTATCCCTTCCGTCCAGGGCAGACA
CCAGACTGCCCACGAGGACTACGGGCGCGGCCCCGCCTCAGTCCCTCCGC
GTCGCTCTCTCAGCACCAATAACGTCGCCTTGATGCAGGAAGCGTCCTCC
GCCGCGGCCTCCGCAGCAGCCGCAGCAGCCGAGGAGGCGGGTGACGACGA
CCACGCGCGGCTGCTGAGCAGGTACAGGCACGCGCGCTCCTCCTCCGAGC
CTCGCGACCGCTTCCAAGGGGCCAGGGCGGTCCACCGTCAGCACCAGCAG
GCGCCGCACCCCCACTACCAGGGCGAGAAGGGGCGGGAGGGGCGGACCTT
AGGGCAGGCTGGGTCTCCTCTTCCCGCGAACCACAACGAGGGCGAGCTTC
TCCTGGATTTTCTCATCACCGTTCGCCGGCAGCACCAAGAAATGGCGCAG
AGCACGTCTTCCTCCTCCAAGTGCGGGAGCGGGGATGACGAGGACTCCCC
CCGGACGAGTCGAGACGGGAGCAGTCCCTCAAGTGCGCTCTCCTCCTCTT
GCGGCGACGGCAATGACAGCAGCGGCAGCAGCGGGAGCGCCGAGGGCGGC
GAAGGGGGTGCCCGTGGCTGGCATGCGGGGAAGGACACGGCGTACAAGAC
TTGTTCCGGGAACGAGGACGAGGAGGACGGGGCAGTGGAGCGTAAAAACG
TGCCCAATTCCCGCCCACGTGCTCAGACCGGACACCACGGGGGCATTCCT
CGGAGCGACTCGCCGGCTAGGCATGGAGGCGAGCCTGTCACAGCTGTCGT
TGCGAACGGGGCCAGTGTGGAGATGAGCACCGAAGCTTTGGGGACAACCT
CAGCTCCCCCCTTGAAGAAAGCAAGGAGCTACGAGTCGTTTCGAATTTGA
TGGATCGGGTAACACGCACAGTGCCGAGGAGCAGTGAGGGGCTGTTCCAC
GATCAGGTGGGAAGCCGCAAGACGCAAGACGAGGCGGAGAAAGAGGAGAC
GAGGGGCGCCACTCTTTGTTCACCTGTTCTTAGGTTGAGTTCTTTGCATT
CGCGTAAGAACTATGCCGGGGGTAGACAAGCATGTCACAGGAAGGTGGAG
GGCGGAGGAACAGGCTTTAAAGTGGAGAGGGGGAAGGCAGGAAAGCGACA
AGATGCCCTAGGCGCCAGGCGCCCTCTGTCAGGGTTGAGAAATGGATTTA
CTGGGTTTTCACCGGTGTGACCAAGTGTAAGCACGTGCGATCCGAACAGG
GAGTGCGCGGGAGTAGAAGAGAGAGAAAGAGGTGTCTGTGTGTGGAAGAG
AGGGAGAGGGAGCGTGTGTGTGTATACGTGTGTAAGGGAAAGAGAAAGAG
GGGAAGAGTGAAAGAAAGAGGGAGAAAGCAAGAGAGAAAATGTTGTGGTG
TACGTGTCTTTGACGACAATGTGCGTGCTTCTTGTATGTGAAACTGATCG
GACGCCGACAAGCCACTCCCTAGCCCTTGACGGGCCGGGAGCAGGAAAGG
GGAGTGAGAAGTGTGGCCTCGAGGCGGTCACACAGAACAATGCTGAGTTC
ATTGCTTACAAGCTGATTGCATGGACTGATGTCTCATACAGAAATATTAG
CGATAATTTGTGAAAGAACGGAGGGAAAAGAGTAGAAAGCCACGCCCCTT
CGTATCGGCAGAGAATAACTTAGACGCAAACCGTGCATTTGTTGCGGGAG
CTTGTGCGATCGAAAGGGATGGCTGAGTATAATAATATCCGGAGCCGAGT
TTTCGGGGATAACGAAGGACTGCGGGGGCGTTGTGCACAATAGGGAGCTG
GTACTTGACTGCGGCTGTCACAATGCAGTGGCGACTTGTGAGAAAGACAC
CCGGGTGTCTCTGGCGAGGCGCGAACCTGTCGAGAGGCCCATTGAAAAAG
AAATGAACCGCAGAAAAGAAAAAAAAAATCGTGCAAAAAGGATCTATAGC
TGGCTTGGAACTTTCACATGTCTG back to topCoding sequence (CDS) from alignment at CM002460.1:563954..567977- >rna3049 ID=rna3049|Name=rna3049|organism=Nannochloropsis gaditana|type=CDS|length=1887bp|location=Sequence derived from alignment at CM002460.1:563954..567977- (Nannochloropsis gaditana)
ATGCATAGGGAAGCGCGTTTTCCAACCCTGCGACTCCCACCCCGAAACGC
TGGAGCGGCGCCGACGGGCACAGGCAGAGCTGGAGGTGTTGCGAAAGGAA
TTTCTCCGGACGACCACCTCCTCGATGCTCTCCTCCTCCTACCACGGGGG
CACGAGCTTGGTCATGCCAGGCTTCCCGCCGGGTCACCCTGGGCCTCCCG
GGCAAGCGAGCCACGCGCCCAACCACCACTGGGGCGGGCACCACGAGCAC
CTCCACCAAGAGCCAGCCGCTGGTCTGTCGCAGCCTTCTGGCTACGGCCC
TCCTCTCCCGGCCCCGTACGCCCCGCCCGGCTACTCCTATCATCCTCCCG
CCTCCCACCCCGAGGGCCTGTCCCCTCCCCTTTCCTCCCACCCTTCGTCC
TCCTCCTCCGGCGGGCCCAGGACTGGAGACCTCTCTTCCTACCACTACGG
CACCCCGAGCGGCAACAACGTCGCCTCCGACCCGCACGCGAACTGGCGCT
CAGCGCACTCCCAAGCCCCGCAAATGTCGCACCACTCGTGGGGCGCACCG
ATGCAGCCCCCTCCCTGCCCCCCCCCCCCCCGCACGACATCATCGGAGGA
CCCGCTTTGGGGCCGGCGGTGCCCATGTTCGGGGGGAGCGGAAGAGGATC
CGATCCTTTCCAAGCCTGTGGGCCAGGCGCCCAACCCCCGCCCTCCCTTG
GGGCACTGCGCATCCACAGCGGGAGCGGTAGGAGCAGCAGCCTTGGCAGC
AACAGCAGCCATGGCGGGAGCATGGGCAGCGAAGGGAGCGGAAGCGGCAG
TGATGACGGCGAGACGGGTACGCGCAGAGGCCCCGCGCATCGGGCCCCTG
GCATGCGCGTGCCAGTGCCGGGGCTACCCCCCTATGCCGTGGAGAGATGC
CCGACTCCCACGGAGCGCGGTCAAGGCAAGGCCAGCAACGCTTTTCGAAG
CAGCAAGCGGACGGCGGAGGGGGAGGAAAAGTCCGAGCCTGGCTTCGATC
GTAAGGATATTTTTATCCCTTCCGTCCAGGGCAGACACCAGACTGCCCAC
GAGGACTACGGGCGCGGCCCCGCCTCAGTCCCTCCGCGTCGCTCTCTCAG
CACCAATAACGTCGCCTTGATGCAGGAAGCGTCCTCCGCCGCGGCCTCCG
CAGCAGCCGCAGCAGCCGAGGAGGCGGGTGACGACGACCACGCGCGGCTG
CTGAGCAGGTACAGGCACGCGCGCTCCTCCTCCGAGCCTCGCGACCGCTT
CCAAGGGGCCAGGGCGGTCCACCGTCAGCACCAGCAGGCGCCGCACCCCC
ACTACCAGGGCGAGAAGGGGCGGGAGGGGCGGACCTTAGGGCAGGCTGGG
TCTCCTCTTCCCGCGAACCACAACGAGGGCGAGCTTCTCCTGGATTTTCT
CATCACCGTTCGCCGGCAGCACCAAGAAATGGCGCAGAGCACGTCTTCCT
CCTCCAAGTGCGGGAGCGGGGATGACGAGGACTCCCCCCGGACGAGTCGA
GACGGGAGCAGTCCCTCAAGTGCGCTCTCCTCCTCTTGCGGCGACGGCAA
TGACAGCAGCGGCAGCAGCGGGAGCGCCGAGGGCGGCGAAGGGGGTGCCC
GTGGCTGGCATGCGGGGAAGGACACGGCGTACAAGACTTGTTCCGGGAAC
GAGGACGAGGAGGACGGGGCAGTGGAGCGTAAAAACGTGCCCAATTCCCG
CCCACGTGCTCAGACCGGACACCACGGGGGCATTCCTCGGAGCGACTCGC
CGGCTAGGCATGGAGGCGAGCCTGTCACAGCTGTCGTTGCGAACGGGGCC
AGTGTGGAGATGAGCACCGAAGCTTTGGGGACAACCTCAGCTCCCCCCTT
GAAGAAAGCAAGGAGCTACGAGTCGTTTCGAATTTGA back to top
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