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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100059g15.8060.mrna |
| Orig protein id | gnl|cribi|Naga_100059g15.8060 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:536774..539136 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3036 ID=rna3036|Name=rna3036|organism=Nannochloropsis gaditana|type=mRNA|length=1107bp
ATGTGTGAGACATGGAGCATCATATTTGAAAATCCAATTGGGATTGAAGG
GGGCCAAATTAAGGGCCATGAACCTTTCGAGCCCACTGTCCCTCGGTGTA
GTGAGAGATGTGAAATGAGTAAGCACACCGCATTTTTCTCCCGATCACTT
ACACATGTTTTGACCATCGATTTCTCTATAGAGAAAAAACTAGCCGGCAC
GCGCAAGCCGCGCGAAGTCATGGCTACTGATGACCAAACGCCTGTCCGCC
CTCCGTCCTCGTCTTGCCCCTCCACCACCTGCTCCTCCTCGGTCTCAACG
CCTCGCCACCCTCCAGCATCCCGAGAGCCCAACGCCAGTAACATAAGACC
TGAATCCCCAACCATTGCTGCTTTCGGCTCCTCCTTTTCCTCTTCCTCCT
CCTCATCTTCCTCCTCCTCCTCCTATCGCTTACTCACCTTTGTAAATGAC
CTGCGGCAGAGCACGGATGAGGCATCTAAAGATCTAAAAGCTGCATTGGC
TGAGAATGAAAGCCTAGGCGCAGAACTTGTTGCTGAAAAAAAGGAGGAGC
AGCGGCTCTTGGAGGGCATGGCTACGGTAATTTCCGATACACGACAGGCT
CAGGACCGGGCGGCGGCGATTCAGACGACTCTGAGCAATTTAGAGGCGAG
GCGGACTGATCTGGCTTGGCGAGTGGGGCTGGTGAGAGCCTTAGAGGGCG
AAATACACTCTTTCTATACCGGCTTCATAGACAAGATGGCCCTCTTACAG
GAACAGTATCGGAGGGAGATGGGCGAGGAAATGGAGAAGGCTGCTGGGAC
GCACGCGCGGCTGATGGAGGTGCGTCGAGAGTTAAAAGTGGCGGCAAAGG
GAGTAAGATCGGCCAAGGAAGATTGTCTGGAGGCGGAGAAGCGACAAGAG
ATTATAGAGAAGGAGCGAGACATGTTCTCAGAGGAGCTTGGGGCAGAGCA
AGAGGAAACCCGGCGCCTGGTCGGTGGAATGAAAGCTATGGATAAAGAAA
TAACGGGCACGGAGGAAACGGTGAGCGAGTTGGAGACCTACACTACGGCC
ATAAGAGATGCACGAATGAGGATAGCGGGTGAGGCGGAATGCAGGGCAGG
GCATTGA back to topprotein sequence of rna3036 >rna3036-protein ID=rna3036-protein|Name=rna3036|organism=Nannochloropsis gaditana|type=polypeptide|length=678bp
MAKTMSNPWILPAVKAALGGKDTGGLTRASSSMSGGCQDLRPKLVQVIRG
SSRHKYLEVSDKESRLAAFITPDAHLAFKKAMPQISLAGLGTCIIKLERW
LVSHQPLAFDSATGPCLAHELHGEDVFSFAPLCLQVSQFSVVATERGQST
YGAPHSVNDRPEIKSLYRELDTNALMMLLARHQGLPRLPDSSGKDVLPEP
IGNKRPVTMEEVEYMLRCEEEEREERIAGASGITAEGAKAMGGPASHVAG
TVRGEEHRPQQEGQWPRCPTPQGGSRSSRPQRAQEDDHLAPTSLRHALES
SAGQARLRGRDGEGVGGKAMAGGPSRGVEEVRSPRKGDENVLHEEQIAKG
GGNGGISQGEGEMASQFGASPLRNFETQDMEEEEEEEEEEPLPPLVEAIR
VSPTRSTRRSTAEYTPTSRKRAREEHPGKGEGQGVEAPTALQKGEERRAS
RSNMDAGQGLSQSEEPPGAGGTGKEGGEASPWRAGRDKTEGHRGAIQAGT
PSETNDLRALGAPPPPRIYPSCHLGAETVAIELQTQIFSQTQVEFTQVEV
PEEGEGRDINAEDVLRRYSPPVSPDASDRERRAASGSLAVEGRLSLSSPR
APPASTGSYASGREAGAKSDRREEQGNLLAAARPFGGRSTVWGLLGFLKA
GDPPAAGKSRRTLQGARASLGGGDSGKR back to topmRNA from alignment at CM002460.1:536774..539136+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3036 ID=rna3036|Name=rna3036|organism=Nannochloropsis gaditana|type=mRNA|length=2363bp|location=Sequence derived from alignment at CM002460.1:536774..539136+ (Nannochloropsis gaditana)
GTCACAACGATGGGCGCGCCAGAATACACTCAGCGTAGCACAATACATAC
CCCAACAGTCAGTCCTCTGCCACACATACAAAGGAAATGGCCAAAACGAT
GTCAAACCCGTGGATTCTGCCCGCCGTGAAGGCGGCCCTGGGCGGTAAAG
ACACTGGAGGGCTAACTCGTGCGAGCAGCAGCATGTCGGGAGGGTGTCAG
GACCTTCGACCAAAGCTAGTCCAGGTGATACGCGGCTCCAGCAGGCATAA
ATACTTGGAGGTGAGCGATAAAGAAAGCAGATTGGCAGCCTTCATAACGC
CTGATGCGCACCTAGCATTTAAAAAGGCCATGCCGCAGATTTCCCTCGCT
GGTCTCGGCACCTGCATTATCAAGCTTGAACGATGGCTTGTTTCACACCA
GCCATTGGCATTTGACTCGGCAACGGGCCCTTGCCTTGCGCACGAGTTGC
ATGGAGAGGACGTATTTTCCTTCGCGCCACTGTGTCTCCAGGTGTCCCAG
TTTTCGGTGGTAGCGACGGAACGAGGGCAGTCCACGTACGGTGCCCCGCA
CAGCGTCAACGACCGACCTGAGATAAAGAGCCTGTACCGAGAGCTGGACA
CGAATGCCCTGATGATGCTCTTGGCGCGGCATCAAGGTCTACCCCGGCTT
CCTGACAGTAGTGGAAAGGATGTTCTGCCGGAGCCCATCGGGAATAAGCG
GCCCGTCaccatggaggaggtcgaatATATGCTCCGttgcgaggaggaag
aaagggaggagcgaaTCGCTGGTGCCAGTGGGATCACTGCGGAGggggcc
aaggccatggGAGGGCCAGCTAGCCATGTCGCCGGAACCGTCCGCGGAGA
GGAGCATCGACcccagcaggaggggcaaTGGCCCAGGTGTCCGACCCCGC
AGGGGGGGTCGCGATCTTCCCGGCCTCAACGCGCACAGGAAGATGACCAT
CTAGCGCCGACGTCGTTGCGCCACGCTCTTGAGTCCAGCGCAGGTCAAGC
GCGGCTTCGTGGCCGTGACGGAGAAGGTgtaggggggaaggcgatggctG
GAGGCCCCTCGCGCGGAGTGGAAGAGGTCCGGTCTCCCCGAAAAGGAGAC
GAGAATGTCCTCCACGAAGAACAAATagcgaaaggaggaggaaatggagg
gatttcgcagggcgagggagagatggcGTCTCAATTTGGAGCCTCGCCGC
TCCGAAATTTCGAGACTcaagacatggaggaggaggaggaggaggaggaa
gaagaaccTTTACCCCCGCTTGTCGAAGCTATCCGAGTGAGCCCAACTCG
CTCAACGCGAAGGAGTACGGCTGAATATACCCCTACCTCCCGTAAACGTG
CGCGTGAGGAGCAtccggggaagggagagggccagGGCGTCGAGGCCCCA
ACGGCTCTtcagaagggagaagagaggcgaGCCTCGCGGTCCAATATGGA
TGCTGGGCAAGGGCTGTCACAGTCAGAGGAGCCGCCCGGCGCAggcggga
cggggaaggagggaggcgaggcttCCCCCTGGCgcgcggggagggacaag
aCGGAGGGGCACAGGGGAGCCATTCAGGCGGGAACTCCGAGCGAGACAAA
CGACCTGCGAGCCTTGGGtgcgccccctccgccacggaTCTATCCTTCAT
GCCATCTCGGCGCAGAGACTGTGGCGATAGAATTGCAGACACAAATCTTC
AGCCAAACGCAAGTGGAGTTCACGCAGGTGGAGGTcccggaggagggtga
gggcagGGACATTAACGCGGAGGACGTGCTTCGCCGGTACTCGCCACCCG
TTTCTCCCGATGCCTCCGACAGGGAACGACGAGCAGCATCCGGCTCCCTG
GCTGTCGAAGGGAGGTTGTCCCTCTCGTCTCCGCGAGCGCCCCCGGCCTC
CACTGGGTCCTATGCGTCTGGCAGGGAAGCGGGGGCCAAGTccgacagga
gggaggaacagggCAACCTGCTGGCCGCGGCCAGGCCCTTCGGCGGCCGT
TCGACGGTGTGGGGCCTCTTGGGTTTCCTGAAAGCAGGGGATCCGCCCGC
GGCCGGCAAGTCGCGCCGCACGCTTCAGGGGGCGCGGGCGAGCCTCGGCG
GTGGAGATTCCGGCAAAAGGTGAGGGATAAGAACCGCAGGGCTGTGCGTG
TCTGGTAATGAGCAGCTGCCGAAATTGTAACCTCGATCCAGATGGCTGTG
TCGCAGCTGCCTGAGGGCTGAAGTTGGGTGGTTCAAAGAAGAGGACTCAT
ACGGaccttttttaaaaaaatcgATAACGAAGGAGTCTTCGAACCTACAA
CAAGACAAACGAATAAACAACAATACTTAATGAAGAAACAAGAACTGATC
CCCACCGAAACCG back to topCoding sequence (CDS) from alignment at CM002460.1:536774..539136+ >rna3036 ID=rna3036|Name=rna3036|organism=Nannochloropsis gaditana|type=CDS|length=2037bp|location=Sequence derived from alignment at CM002460.1:536774..539136+ (Nannochloropsis gaditana)
ATGGCCAAAACGATGTCAAACCCGTGGATTCTGCCCGCCGTGAAGGCGGC
CCTGGGCGGTAAAGACACTGGAGGGCTAACTCGTGCGAGCAGCAGCATGT
CGGGAGGGTGTCAGGACCTTCGACCAAAGCTAGTCCAGGTGATACGCGGC
TCCAGCAGGCATAAATACTTGGAGGTGAGCGATAAAGAAAGCAGATTGGC
AGCCTTCATAACGCCTGATGCGCACCTAGCATTTAAAAAGGCCATGCCGC
AGATTTCCCTCGCTGGTCTCGGCACCTGCATTATCAAGCTTGAACGATGG
CTTGTTTCACACCAGCCATTGGCATTTGACTCGGCAACGGGCCCTTGCCT
TGCGCACGAGTTGCATGGAGAGGACGTATTTTCCTTCGCGCCACTGTGTC
TCCAGGTGTCCCAGTTTTCGGTGGTAGCGACGGAACGAGGGCAGTCCACG
TACGGTGCCCCGCACAGCGTCAACGACCGACCTGAGATAAAGAGCCTGTA
CCGAGAGCTGGACACGAATGCCCTGATGATGCTCTTGGCGCGGCATCAAG
GTCTACCCCGGCTTCCTGACAGTAGTGGAAAGGATGTTCTGCCGGAGCCC
ATCGGGAATAAGCGGCCCGTCaccatggaggaggtcgaatATATGCTCCG
ttgcgaggaggaagaaagggaggagcgaaTCGCTGGTGCCAGTGGGATCA
CTGCGGAGggggccaaggccatggGAGGGCCAGCTAGCCATGTCGCCGGA
ACCGTCCGCGGAGAGGAGCATCGACcccagcaggaggggcaaTGGCCCAG
GTGTCCGACCCCGCAGGGGGGGTCGCGATCTTCCCGGCCTCAACGCGCAC
AGGAAGATGACCATCTAGCGCCGACGTCGTTGCGCCACGCTCTTGAGTCC
AGCGCAGGTCAAGCGCGGCTTCGTGGCCGTGACGGAGAAGGTgtaggggg
gaaggcgatggctGGAGGCCCCTCGCGCGGAGTGGAAGAGGTCCGGTCTC
CCCGAAAAGGAGACGAGAATGTCCTCCACGAAGAACAAATagcgaaagga
ggaggaaatggagggatttcgcagggcgagggagagatggcGTCTCAATT
TGGAGCCTCGCCGCTCCGAAATTTCGAGACTcaagacatggaggaggagg
aggaggaggaggaagaagaaccTTTACCCCCGCTTGTCGAAGCTATCCGA
GTGAGCCCAACTCGCTCAACGCGAAGGAGTACGGCTGAATATACCCCTAC
CTCCCGTAAACGTGCGCGTGAGGAGCAtccggggaagggagagggccagG
GCGTCGAGGCCCCAACGGCTCTtcagaagggagaagagaggcgaGCCTCG
CGGTCCAATATGGATGCTGGGCAAGGGCTGTCACAGTCAGAGGAGCCGCC
CGGCGCAggcgggacggggaaggagggaggcgaggcttCCCCCTGGCgcg
cggggagggacaagaCGGAGGGGCACAGGGGAGCCATTCAGGCGGGAACT
CCGAGCGAGACAAACGACCTGCGAGCCTTGGGtgcgccccctccgccacg
gaTCTATCCTTCATGCCATCTCGGCGCAGAGACTGTGGCGATAGAATTGC
AGACACAAATCTTCAGCCAAACGCAAGTGGAGTTCACGCAGGTGGAGGTc
ccggaggagggtgagggcagGGACATTAACGCGGAGGACGTGCTTCGCCG
GTACTCGCCACCCGTTTCTCCCGATGCCTCCGACAGGGAACGACGAGCAG
CATCCGGCTCCCTGGCTGTCGAAGGGAGGTTGTCCCTCTCGTCTCCGCGA
GCGCCCCCGGCCTCCACTGGGTCCTATGCGTCTGGCAGGGAAGCGGGGGC
CAAGTccgacaggagggaggaacagggCAACCTGCTGGCCGCGGCCAGGC
CCTTCGGCGGCCGTTCGACGGTGTGGGGCCTCTTGGGTTTCCTGAAAGCA
GGGGATCCGCCCGCGGCCGGCAAGTCGCGCCGCACGCTTCAGGGGGCGCG
GGCGAGCCTCGGCGGTGGAGATTCCGGCAAAAGGTGA back to top
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