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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100026g12.10658.mrna |
| Orig protein id | gnl|cribi|Naga_100026g12.10658 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:751025..753198 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna303 ID=rna303|Name=rna303|organism=Nannochloropsis gaditana|type=mRNA|length=234bp
ATGTTACCTTCCTTTGAGGCACAAGTGACCCAAGCCCTAAACCTATCACA
GACACACATCGCACCGCTTCGACGACAACGTTGCTCCCTACTCTACCACG
AACGTGTCTGCACACATAAAATCCCTCCCGGTAGACTCAGGACTTACTTT
GTGCTCCATCCGAGCGAGGGAAGCCTCATGTCTTCGACCGCATCACCTCT
TCAGTTCTACTGGGCGAGCATGGGTGCTTATTAA back to topprotein sequence of rna303 >rna303-protein ID=rna303-protein|Name=rna303|organism=Nannochloropsis gaditana|type=polypeptide|length=701bp
MDEPSIPTSSVNHDGFSSRAAKAQVSRSQDCFAEGSQEEESCSGIRSHPC
SRPAEQIDASAPLSSSTMKSERVRYSAPQLWHRSSRHRTPPSAGSASSAR
RLEELKPEEQVLRLRASEISALAGLHPFKDVLELLDRHIYQDLPHLQAED
CASCGLVLMTKEEEFEELVGLAGPEAALLRQVHSNSFSAAVQTTQDVDRR
RSDITDVLERVAARGRVGAEEVTLLRNHMTYSLATEYGKRHEDAGIKQYE
ATHGVQVHSQNDTLLAWTFPRDPTAVSWDKPPPLQVTPLRPEAMARARGA
PGESEGEMPGNGEAGGSDGAARVSPGQESPLGTDGCAPLGVPNGRLEALV
SVPGVCQGRARSLRGPDAWFRVCGVMDGLTEALDASDDDPAAWRLRTTVV
EVKHRVAPANVQDPPPFHDTLQLLTYMLMLDGARGGGGSTWGDLVQVARG
QWSGRGGSQSCGPRTDDEEATVTATTRITLKGGQLEHGKLYFAHVVPRLY
AYSDLVYALRNDADARRAFLLSDEDAKWDLVYRRLPFLPAFRPQFNYDPK
KISNNSIPAKSDIKRRVQTTKGNGNTATTTASRPDNSSSLLRATEPEGRG
HAQCRQETQAIADDIVSWSFYRQSYRAADSKASELGDLSKDGKIQPKLEH
FHRKQYPKVVQVTEHRIYAKVHACKQKKYNSVCESLDGKVLTSWAVWAET
G back to topmRNA from alignment at CM002455.1:751025..753198+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna303 ID=rna303|Name=rna303|organism=Nannochloropsis gaditana|type=mRNA|length=2174bp|location=Sequence derived from alignment at CM002455.1:751025..753198+ (Nannochloropsis gaditana)
ATGGACGAGCCTTCGATACCCACGTCCTCGGTCAATCACGATGGATTCTC
CTCGCGAGCTGCGAAGGCTCAGGTGTCGAGAAGCCAAGATTGCTTTGCAG
AAGGGtcgcaagaggaggagtcaTGTAGTGGGATAAGAAGCCATCCATGC
TCAAGACCTGCGGAGCAGATTGATGCAAGTGCACCCTTGTCATCCTCGAC
TATGAAAAGCGAGCGTGTCAGGTACAGTGCACCCCAATTGTGGCACAGAA
GCTCGAGGCACCGCACACCTCCCTCGGCGGGCTCGGCATCATCCGCAAGA
CGCCTCGAGGAGCTCAAGCCGGAGGAGCAAGTATTGCGGTTGCGCGCATC
GGAAATATCGGCACTGGCAGGCCTCCATCCTTTCAAAGACGTACTGGAGC
TATTAGACCGACACATCTATCAGGATTTGCCTCACCTGCAAGCGGAAGAT
TGCGCGTCGTGCGGGCTGGTGTTGatgacgaaggaggaagaattcGAGGA
GCTGGTTGGGCTAGCGGGTCCAGAGGCTGCTTTGCTCCGCCAAGTGCACT
CAAACAGTTTTTCGGCCGCTGTGCAGACCACACAAGACGTGGATAGACGC
AGAAGCGATATAACGGATGTGCTGGAGCGAGTGGCCGCACGAGGGCGAGt
tggcgcggaggaggtgacgctCTTGCGAAATCATATGACTTACTCCCTGG
CCACAGAATACGGCAAGCGGCACGAAGATGCGGGCATTAAGCAGTACGAG
GCCACCCATGGCGTCCAAGTCCACAGTCAGAACGACACTTTGCTGGCATG
GACGTTCCCTCGAGACCCCACTGCCGTCTCCTGGGAcaagccccctcctc
tgcaggTCACGCCCCTGAGACCCGAGGCGATGGCGCGCGCGCGCGGTGCC
CCCGGCGAGTCAGAGGGTGAGATGCCTGGGAatggggaggcagggggctc
GGATGGAGCAGCTCGTGTCTCGCCTGGACAGGAGAGCCCTCTCGGAACCG
ATGGCTGCGCGCCGCTTGGAGTCCCCAATGGGCGCTTGGAGGCGCTCGTT
TCGGTCCCAGGTGTGTGCCAAGGGCGCGCAAGGAGCCTGCGGGGCCCTGA
CGCCTGGTTTCGCGTGTGTGGGGTGATGGACGGCCTCACGGAGGCGCTGG
ACGCGAGCGATGACGACCCGGCCGCGTGGAGGCTCAGGACGACGGTGGTA
GAGGTCAAGCACCGCGTCGCCCCCGCGAACGTCCAggaccccccgccctt
ccacgacaccctccagctcctcacCTACATGCTCATGCTCGACGGGgccc
ggggcggggggggctccACGTGGGGGGACTTGGTGCAGGTCGCGCGAGGG
CAGTGGAGCGGCAGGGGGGGGTCGCAGTCTTGTGGACCAAGGacggacga
tgaggaggcgaCGGTTACGGCGACCACCCGCATCACTCTGAAGGGGGGAC
AGCTCGAGCATGGGAAGCTCTACTTTGCCCATGTGGTGCCGCGTCTTTAT
GCCTATTCTGATCTGGTTTACGCTCTCCGGAATGATGCTGACGCTCGCAG
GGCTTTCCTACTTTCTGATGAAGATGCCAAGTGGGATTTGGTATACCGAC
GTTTGCCATTCCTTCCCGCTTTTCGTCCTCAATTTAATTACGATCCAAAG
AAAATATCGAACAATTCAATTCCTGCAAAATCTGACATTAAGAGGCGTGT
TCAAACGACGAAAGGGAATGGAAACAGTCAGTGGTCAGCCAtacaaagga
gggaggaaaaaggtgcAAAAGTCTGTTGTGTGCAccaaaagcagcagcaa
caacaacggCCTCAAGGCCAGATAACTCTTCATCACTTTTACGAGCTACG
GAGCCAGAGGGGCGTGGTCACGCGCAGTGCCGACAAGAGACACAAGCCAT
CGCCGATGACATAGTGTCATGGAGTTTTTACCGGCAATCCTATAGGGCTG
CAGACAGTAAGGCTTCAGAACTGGGAGATTTATCGAAAGATGGTAAGATA
CAACCCAAGCTTGAACATTTTCACAGGAAACAATATCCCAAAGTTGTACA
GGTTACAGAGCACAGGATTTATGCGAAGGTGCATGCATGTAAACAGAAGA
AATATAATTCAGTGTGTGAGTCTCTCGACGGGAAGGTCCTGACATCGTGG
GCGGTATGGGCCGAGACCGGGTGA back to topCoding sequence (CDS) from alignment at CM002455.1:751025..753198+ >rna303 ID=rna303|Name=rna303|organism=Nannochloropsis gaditana|type=CDS|length=4212bp|location=Sequence derived from alignment at CM002455.1:751025..753198+ (Nannochloropsis gaditana)
ATGGACGAGCCTTCGATACCCACGTCCTCGGTCAATCACGATGGATTCTC
CTCGCGAGCTGCGAAGGCTCAGGTGTCGAGAAGCCAAGATTGCTTTGCAG
AAGGGtcgcaagaggaggagtcaTGTAGTGGGATAAGAAGCCATCCATGC
TCAAGACCTGCGGAGCAGATTGATGCAAGTGCACCCTTGTCATCCTCGAC
TATGAAAAGCGAGCGTGTCAGGTACAGTGCACCCCAATTGTGGCACAGAA
GCTCGAGGCACCGCACACCTCCCTCGGCGGGCTCGGCATCATCCGCAAGA
CGCCTCGAGGAGCTCAAGCCGGAGGAGCAAGTATTGCGGTTGCGCGCATC
GGAAATATCGGCACTGGCAGGCCTCCATCCTTTCAAAGACGTACTGGAGC
TATTAGACCGACACATCTATCAGGATTTGCCTCACCTGCAAGCGGAAGAT
TGCGCGTCGTGCGGGCTGGTGTTGatgacgaaggaggaagaattcGAGGA
GCTGGTTGGGCTAGCGGGTCCAGAGGCTGCTTTGCTCCGCCAAGTGCACT
CAAACAGTTTTTCGGCCGCTGTGCAGACCACACAAGACGTGGATAGACGC
AGAAGCGATATAACGGATGTGCTGGAGCGAGTGGCCGCACGAGGGCGAGt
tggcgcggaggaggtgacgctCTTGCGAAATCATATGACTTACTCCCTGG
CCACAGAATACGGCAAGCGGCACGAAGATGCGGGCATTAAGCAGTACGAG
GCCACCCATGGCGTCCAAGTCCACAGTCAGAACGACACTTTGCTGGCATG
GACGTTCCCTCGAGACCCCACTGCCGTCTCCTGGGAcaagccccctcctc
tgcaggTCACGCCCCTGAGACCCGAGGCGATGGCGCGCGCGCGCGGTGCC
CCCGGCGAGTCAGAGGGTGAGATGCCTGGGAatggggaggcagggggctc
GGATGGAGCAGCTCGTGTCTCGCCTGGACAGGAGAGCCCTCTCGGAACCG
ATGGCTGCGCGCCGCTTGGAGTCCCCAATGGGCGCTTGGAGGCGCTCGTT
TCGGTCCCAGGTGTGTGCCAAGGGCGCGCAAGGAGCCTGCGGGGCCCTGA
CGCCTGGTTTCGCGTGTGTGGGGTGATGGACGGCCTCACGGAGGCGCTGG
ACGCGAGCGATGACGACCCGGCCGCGTGGAGGCTCAGGACGACGGTGGTA
GAGGTCAAGCACCGCGTCGCCCCCGCGAACGTCCAggaccccccgccctt
ccacgacaccctccagctcctcacCTACATGCTCATGCTCGACGGGgccc
ggggcggggggggctccACGTGGGGGGACTTGGTGCAGGTCGCGCGAGGG
CAGTGGAGCGGCAGGGGGGGGTCGCAGTCTTGTGGACCAAGGacggacga
tgaggaggcgaCGGTTACGGCGACCACCCGCATCACTCTGAAGGGGGGAC
AGCTCGAGCATGGGAAGCTCTACTTTGCCCATGTGGTGCCGCGTCTTTAT
GCCTATTCTGATCTGGTTTACGCTCTCCGGAATGATGCTGACGCTCGCAG
GGCTTTCCTACTTTCTGATGAAGATGCCAAGTGGGATTTGGTATACCGAC
GTTTGCCATTCCTTCCCGCTTTTCGTCCTCAATTTAATTACGATCCAAAG
AAAATATCGAACAATTCAATTCCTGCAAAATCTGACATTAAGAGGCGTGT
TCAAACGACGAAAGGGAATGGAAACAcagcaacaacaacggCCTCAAGGC
CAGATAACTCTTCATCACTTTTACGAGCTACGGAGCCAGAGGGGCGTGGT
CACGCGCAGTGCCGACAAGAGACACAAGCCATCGCCGATGACATAGTGTC
ATGGAGTTTTTACCGGCAATCCTATAGGGCTGCAGACAGTAAGGCTTCAG
AACTGGGAGATTTATCGAAAGATGGTAAGATACAACCCAAGCTTGAACAT
TTTCACAGGAAACAATATCCCAAAGTTGTACAGGTTACAGAGCACAGGAT
TTATGCGAAGGTGCATGCATGTAAACAGAAGAAATATAATTCAGTGTGTG
AGTCTCTCGACGGGAAGGTCCTGACATCGTGGGCGGTATGGGCCGAGACC
GGGTGAATGGACGAGCCTTCGATACCCACGTCCTCGGTCAATCACGATGG
ATTCTCCTCGCGAGCTGCGAAGGCTCAGGTGTCGAGAAGCCAAGATTGCT
TTGCAGAAGGGtcgcaagaggaggagtcaTGTAGTGGGATAAGAAGCCAT
CCATGCTCAAGACCTGCGGAGCAGATTGATGCAAGTGCACCCTTGTCATC
CTCGACTATGAAAAGCGAGCGTGTCAGGTACAGTGCACCCCAATTGTGGC
ACAGAAGCTCGAGGCACCGCACACCTCCCTCGGCGGGCTCGGCATCATCC
GCAAGACGCCTCGAGGAGCTCAAGCCGGAGGAGCAAGTATTGCGGTTGCG
CGCATCGGAAATATCGGCACTGGCAGGCCTCCATCCTTTCAAAGACGTAC
TGGAGCTATTAGACCGACACATCTATCAGGATTTGCCTCACCTGCAAGCG
GAAGATTGCGCGTCGTGCGGGCTGGTGTTGatgacgaaggaggaagaatt
cGAGGAGCTGGTTGGGCTAGCGGGTCCAGAGGCTGCTTTGCTCCGCCAAG
TGCACTCAAACAGTTTTTCGGCCGCTGTGCAGACCACACAAGACGTGGAT
AGACGCAGAAGCGATATAACGGATGTGCTGGAGCGAGTGGCCGCACGAGG
GCGAGttggcgcggaggaggtgacgctCTTGCGAAATCATATGACTTACT
CCCTGGCCACAGAATACGGCAAGCGGCACGAAGATGCGGGCATTAAGCAG
TACGAGGCCACCCATGGCGTCCAAGTCCACAGTCAGAACGACACTTTGCT
GGCATGGACGTTCCCTCGAGACCCCACTGCCGTCTCCTGGGAcaagcccc
ctcctctgcaggTCACGCCCCTGAGACCCGAGGCGATGGCGCGCGCGCGC
GGTGCCCCCGGCGAGTCAGAGGGTGAGATGCCTGGGAatggggaggcagg
gggctcGGATGGAGCAGCTCGTGTCTCGCCTGGACAGGAGAGCCCTCTCG
GAACCGATGGCTGCGCGCCGCTTGGAGTCCCCAATGGGCGCTTGGAGGCG
CTCGTTTCGGTCCCAGGTGTGTGCCAAGGGCGCGCAAGGAGCCTGCGGGG
CCCTGACGCCTGGTTTCGCGTGTGTGGGGTGATGGACGGCCTCACGGAGG
CGCTGGACGCGAGCGATGACGACCCGGCCGCGTGGAGGCTCAGGACGACG
GTGGTAGAGGTCAAGCACCGCGTCGCCCCCGCGAACGTCCAggacccccc
gcccttccacgacaccctccagctcctcacCTACATGCTCATGCTCGACG
GGgcccggggcggggggggctccACGTGGGGGGACTTGGTGCAGGTCGCG
CGAGGGCAGTGGAGCGGCAGGGGGGGGTCGCAGTCTTGTGGACCAAGGac
ggacgatgaggaggcgaCGGTTACGGCGACCACCCGCATCACTCTGAAGG
GGGGACAGCTCGAGCATGGGAAGCTCTACTTTGCCCATGTGGTGCCGCGT
CTTTATGCCTATTCTGATCTGGTTTACGCTCTCCGGAATGATGCTGACGC
TCGCAGGGCTTTCCTACTTTCTGATGAAGATGCCAAGTGGGATTTGGTAT
ACCGACGTTTGCCATTCCTTCCCGCTTTTCGTCCTCAATTTAATTACGAT
CCAAAGAAAATATCGAACAATTCAATTCCTGCAAAATCTGACATTAAGAG
GCGTGTTCAAACGACGAAAGGGAATGGAAACAcagcaacaacaacggCCT
CAAGGCCAGATAACTCTTCATCACTTTTACGAGCTACGGAGCCAGAGGGG
CGTGGTCACGCGCAGTGCCGACAAGAGACACAAGCCATCGCCGATGACAT
AGTGTCATGGAGTTTTTACCGGCAATCCTATAGGGCTGCAGACAGTAAGG
CTTCAGAACTGGGAGATTTATCGAAAGATGGTAAGATACAACCCAAGCTT
GAACATTTTCACAGGAAACAATATCCCAAAGTTGTACAGGTTACAGAGCA
CAGGATTTATGCGAAGGTGCATGCATGTAAACAGAAGAAATATAATTCAG
TGTGTGAGTCTCTCGACGGGAAGGTCCTGACATCGTGGGCGGTATGGGCC
GAGACCGGGTGA back to top
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