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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100059g9.8044.mrna |
| Orig protein id | gnl|cribi|Naga_100059g9.8044 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:525518..527680 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3029 ID=rna3029|Name=rna3029|organism=Nannochloropsis gaditana|type=mRNA|length=1848bp
ATGATCGCCTTTTCCCTTGGGCGGTTGGAGGCACCATTGCTGCTTCTAGG
CCTTGTAGGATTCATCAAGGCCCATGCTTTCGTCGCGCCTTGTCGTCCTC
GTCCGCGCTACGAGAGCGCTGCCAGGCCGTTGCGCCGGTGGGCACGAGAG
CATGGGGCGGACCAATCGAAATCTCCCATTGTCGAAGCCCTCTCCTTGGC
CGCAGCACGCATCAAAGCACCTTTCTTTTTTCCAGGGCACAAGATGGGGC
GAGGACTCCCCGTGGGGCTGCCTGGCCCTTTTGCCGAAACCAACACTGCC
CTGAATAAGACGCGCGTCCACAGGGATGATGTGTGGCAGCACGATCTTCC
AGAAATTCCAGAGCTCGACAACCTCTTTGCTCCCGAAGGTCCTATTCGAG
ATGCCGAAACGCTGGCGGCAGAAACTTTCGGAGGCGCACAGCGGACGTGG
TTTCTGGTGAACGGGAGTACGGCGGGTGTTTTGGCAGCTCTGCTTGCACT
CGTGCGCAGGCACCAACAAGAAGGGCAGCAGCACCCGGCGCGTTCAGGAA
GGTCTATCCAGAGCAAGGTGCTTCTCCCTCGAAACGTCCATAAATCGGCT
ATCAATGGTCTCATACTCTCTGGGGCCGTTCCTGTCTTCCTCAGTCCCGT
CTACGACCCCGCATGGGACATCTGTCACGGTGTCCCGATTGAAAGCGCGC
TGCAGCAGGCCTTGGAAGAACACGCCTCTGGATCGGAGGTGGCGGCCGTG
CTGCTCGTCTCGCCGACCTATCACGGCGCGGTCATGGACATAGAGCAAGC
CGCGCTTCTGTGCGCAAAGTTCAAGGTCCCCCTGATAGTCGACGAGGCGC
ATGGAGCACACCTGGCTTTCCTAGAAGTAGAAGTAAACGAACCGGGCAAC
GTAGGCCCGCTCGCTTCGCGAGCCATGACAGGTGCCCTTGCTCAGGGTGC
AGACTTGGTCGTCCAGAGCACGCACAAGACCCTCACGGCAGTCAGTCAGT
GTGCGATGATGCACGCTGGCAAGGGCCCCTTGGTGGACAGTGCCATGCTC
GAGTTTGTGGGATCGGCTCTACAACTTGTGCAGAGCAGCTCACCCAACTA
CGTGCTGCTGGCGTCGCTCGACGGGGCGCGATGGCAGCTTGGCTCCCCCC
TGGGGGGTGGGCGGGCAGCATTGCATCGGGCCCAGAAACTAGCAGCAAAG
GCCAAGCGCTTGCTGCTGGAGGAGACGCCCTTTCCGATTTTAAAACCCCC
AGATCGGCCCAAGGGGGGGGCATTTGTGGGTTTGGATCCGCTCCGATTGA
CCGTCGGGACGATGGGGACCGGGATGAGTGGCTTCGACGCTGACGAGGTG
CTGATCGAGGAGCACGGGGTGTACGCGGAGCTGCCGGCGTCTCGCACACT
GACGTTCGCGGTGGGACCTGGGAGCGAGGAGGAAGATATAGATTGCCTCG
TCGCTGCCTTCAAGGCATTGGCTACATTGGTAGACAAAGGGAAGAGGGAT
GGGAGCCAGGACATGGCTGGGGAAGAAGCGTCGTCGTTCATGACCGATTT
CCCCCCTTTCGACGGCAAGCAGGCTGCGGCGGGGAGCTTGAAATGCGGAC
CGCGCGATGCCTATTTTACGGCCTCCGAGGTGCTGTCCACAAACGACGAG
CGAGTTGTGGGTCGAGCGAGCGCGGAGACCGTTTGCCCCTACCCCCCCGG
CATTCCCGTCCTACTCCCGGGCGAGATCATTACCGTGGAGGTGTTGCGCT
TTCTAAAAGGCGTGCTTTCAACCGGGGGGTCGGTGACAGGGTGCAGCGAC
CCCAGCCTGGGGAAGATTCGTGTATTGTGTTGGGAAAAAGAGAAATGA back to topprotein sequence of rna3029 >rna3029-protein ID=rna3029-protein|Name=rna3029|organism=Nannochloropsis gaditana|type=polypeptide|length=631bp
MASATTPDSLLSSPSKLSTHDEKIHTSSPPYSFATDLLGSFEKVRKNHTQ
TLKVLEELAIMIKGRAAVEEVYSQQMARLVSDHTHGLRRLGEALARKAGG
MGVNEGDSVAETSSCTIESTFRECVESLKADMLNRSVQRKQLAKNILADV
FAPLEDIYDRLASESRGLEDLLGTLTKQGRACESRYRSAHKKYEQAVQLA
TNACDILTEKGQSLPSLDIKLLHQRYSNSSRAASPATPSPFDLKKEDFSA
ILAGSPRKISEAFTQAAKKDITTWLLPLDKGRRDDLDTIAKNHLEMAELF
RFACLERFDELSTFARRAAHELQRVLCHYQSCEERCIERLAVVLRKQIVF
ESSCLANEQFEAQIIFKVIEAMDKDKDLEAFIHAHKVPFPGADVDSTLKS
LGLIGNPLPAPPASPEEIGKSTCDENLLHASGTVIVGREDLPHLSSPAPR
VVPATTVLRLLGGNLSASGTPTPTPHHSSTLRTTNGNPFSDFSSMLNKSL
RSPLAAALSSKNAAPPPDAPSQVLMSPPVPEVGLEGLPFELQAPPSVRLG
NMVEPTQSLDDEGHDSVEDEIEEGENDDEGFSALQKHARRLRGVAKEYSP
YQEEGNRSAISSPLIPLEEILTADGGIEYRL back to topmRNA from alignment at CM002460.1:525518..527680- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3029 ID=rna3029|Name=rna3029|organism=Nannochloropsis gaditana|type=mRNA|length=2163bp|location=Sequence derived from alignment at CM002460.1:525518..527680- (Nannochloropsis gaditana)
CTAAACCTTCCCGCCCCGTTGCAGGCCATAATTCGAATCACCTGAATTTG
AAAGCTACCACCTGGTGTTGTAAGGATCACAAAACACCAATATGGCCTCG
GCCACGACGCCGGATTCATTGTTGAGCAGCCCTTCCAAACTTTCTACACA
CGACGAGAAAATTCATACTTCATCTCCTCCTTATTCCTTCGCCACCGATC
TTTTGGGGTCCTTTGAAAAAGTGAGGAAGAACCATACACAAACACTGAAG
GTTCTGGAGGAGTTAGCCATCATGATAAAAGGTCGGGCAGCTGTTGAGGA
GGTATATTCTCAGCAAATGGCGCGTCTGGTATCGGACCACACTCACGGTC
TCCGCCGTTTAGGTGAAGCATTGGCCCGCAAAGCTGGAGGTATGGGGGTC
AATGAAGGAGATTCTGTCGCTGAAACAAGCTCATGTACCATTGAGAGTAC
GTTTCGAGAATGTGTGGAAAGTTTGAAAGCGGACATGCTTAATAGGTCTG
TGCAACGCAAACAGCTCGCTAAAAATATCCTTGCAGACGTATTCGCACCA
CTTGAAGACATATATGATAGGTTAGCATCTGAAAGCAGGGGCTTGGAGGA
TCTCTTGGGGACATTAACAAAGCAGGGACGAGCATGTGAAAGCCGATACC
GAAGCGCTCACAAGAAATACGAGCAGGCCGTCCAGCTGGCGACCAATGCC
TGCGACATTTTGACCGAGAAAGGCCAGTCTCTTCCATCTCTTGATATAAA
ACTTCTGCATCAACGATATTCCAACTCTTCTCGTGCCGCTAGTCCTGCTA
CACCATCGCCATTCGATTTAAAGAAGGAGGACTTCAGTGCTATCTTGGCG
GGAAGCCCCAGAAAGATCTCCGAAGCATTTACGCAGGCAGCGAAGAAGGA
TATAACGTAAGTGGACTCTCACGCATTACTCTTTGTCTTTATTGGTTATT
TTTCTTCGTTATACTTTTGCGTCGAGCAATAATCCTAACGTTAACCCTAA
TTATGATATCCCTTCGCTTACAGCACCTGGTTGCTCCCCCTTGATAAAGG
TCGGCGGGATGACCTCGATACGATCGCCAAAAATCACCTTGAGATGGCTG
AACTGTTTCGGTTTGCTTGTTTGGAGAGATTCGACGAACTCAGTACATTC
GCACGCCGCGCGGCGCATGAACTTCAGAGAGTCCTGTGTCATTATCAATC
ATGCGAGGAGCGCTGTATTGAGAGGCTGGCCGTAGTACTCCGGAAACAGA
TCGTGTTCGAGTCCAGCTGTCTCGCGAACGAGCAGTTTGAGGCTCAAATC
ATTTTCAAGGTTATCGAAGCCATGGATAAGGACAAGGACCTAGAGGCCTT
CATCCATGCGCATAAAGTGCCATTCCCAGGAGCCGATGTTGACAGCACGC
TCAAGAGCCTCGGGTTGATAGGGAACCCCTTGCCCGCACCACCCGCTTCT
CCAGAGGAAATTGGCAAGAGTACATGCGATGAAAATCTTTTACATGCGAG
CGGCACCGTGATTGTCGGTAGAGAAGATCTGCCCCACCTCAGTAGCCCCG
CCCCCCGCGTCGTTCCTGCGACCACCGTCCTTCGCCTCCTCGGGGGGAAT
TTGTCGGCTTCCGGCACTCCTACACCGACGCCTCATCATTCTTCGACTCT
GCGCACCACAAATGGGAACCCGTTCTCGGACTTCTCCTCCATGCTGAACA
AGAGTCTCAGGTCTCCTCTCGCAGCAGCCCTATCCTCGAAAAACGCTGCT
CCCCCTCCCGACGCGCCCTCGCAGGTCCTCATGTCCCCACCAGTCCCTGA
AGTCGGCCTCGAAGGTCTTCCTTTCGAACTTCAGGCCCCTCCCTCCGTGC
GGCTGGGCAATATGGTCGAGCCCACTCAGAGCCTGGACGACGAAGGCCAC
GACAGCGTGGAAGACGAGATCGAGGAGGGGGAAAATGACGATGAGGGATT
TTCCGCGTTGCAGAAACATGCACGACGTTTACGAGGGGTTGCAAAAGAGT
ATAGTCCCTACCAGGAGGAGGGAAATAGATCAGCGATCAGCTCACCTTTG
ATACCGTTGGAGGAGATTCTCACAGCTGATGGTGGAATCGAATATCGGCT
GTAAAGACAATATATATCAACTAGCTGTACACAGGCGCAGAGAGTGAATG
AGTAGACTGATCA back to topCoding sequence (CDS) from alignment at CM002460.1:525518..527680- >rna3029 ID=rna3029|Name=rna3029|organism=Nannochloropsis gaditana|type=CDS|length=3792bp|location=Sequence derived from alignment at CM002460.1:525518..527680- (Nannochloropsis gaditana)
CACCTGGTTGCTCCCCCTTGATAAAGGTCGGCGGGATGACCTCGATACGA
TCGCCAAAAATCACCTTGAGATGGCTGAACTGTTTCGGTTTGCTTGTTTG
GAGAGATTCGACGAACTCAGTACATTCGCACGCCGCGCGGCGCATGAACT
TCAGAGAGTCCTGTGTCATTATCAATCATGCGAGGAGCGCTGTATTGAGA
GGCTGGCCGTAGTACTCCGGAAACAGATCGTGTTCGAGTCCAGCTGTCTC
GCGAACGAGCAGTTTGAGGCTCAAATCATTTTCAAGGTTATCGAAGCCAT
GGATAAGGACAAGGACCTAGAGGCCTTCATCCATGCGCATAAAGTGCCAT
TCCCAGGAGCCGATGTTGACAGCACGCTCAAGAGCCTCGGGTTGATAGGG
AACCCCTTGCCCGCACCACCCGCTTCTCCAGAGGAAATTGGCAAGAGTAC
ATGCGATGAAAATCTTTTACATGCGAGCGGCACCGTGATTGTCGGTAGAG
AAGATCTGCCCCACCTCAGTAGCCCCGCCCCCCGCGTCGTTCCTGCGACC
ACCGTCCTTCGCCTCCTCGGGGGGAATTTGTCGGCTTCCGGCACTCCTAC
ACCGACGCCTCATCATTCTTCGACTCTGCGCACCACAAATGGGAACCCGT
TCTCGGACTTCTCCTCCATGCTGAACAAGAGTCTCAGGTCTCCTCTCGCA
GCAGCCCTATCCTCGAAAAACGCTGCTCCCCCTCCCGACGCGCCCTCGCA
GGTCCTCATGTCCCCACCAGTCCCTGAAGTCGGCCTCGAAGGTCTTCCTT
TCGAACTTCAGGCCCCTCCCTCCGTGCGGCTGGGCAATATGGTCGAGCCC
ACTCAGAGCCTGGACGACGAAGGCCACGACAGCGTGGAAGACGAGATCGA
GGAGGGGGAAAATGACGATGAGGGATTTTCCGCGTTGCAGAAACATGCAC
GACGTTTACGAGGGGTTGCAAAAGAGTATAGTCCCTACCAGGAGGAGGGA
AATAGATCAGCGATCAGCTCACCTTTGATACCGTTGGAGGAGATTCTCAC
AGCTGATGGTGGAATCGAATATCGGCTGTAAATGGCCTCGGCCACGACGC
CGGATTCATTGTTGAGCAGCCCTTCCAAACTTTCTACACACGACGAGAAA
ATTCATACTTCATCTCCTCCTTATTCCTTCGCCACCGATCTTTTGGGGTC
CTTTGAAAAAGTGAGGAAGAACCATACACAAACACTGAAGGTTCTGGAGG
AGTTAGCCATCATGATAAAAGGTCGGGCAGCTGTTGAGGAGGTATATTCT
CAGCAAATGGCGCGTCTGGTATCGGACCACACTCACGGTCTCCGCCGTTT
AGGTGAAGCATTGGCCCGCAAAGCTGGAGGTATGGGGGTCAATGAAGGAG
ATTCTGTCGCTGAAACAAGCTCATGTACCATTGAGAGTACGTTTCGAGAA
TGTGTGGAAAGTTTGAAAGCGGACATGCTTAATAGGTCTGTGCAACGCAA
ACAGCTCGCTAAAAATATCCTTGCAGACGTATTCGCACCACTTGAAGACA
TATATGATAGGTTAGCATCTGAAAGCAGGGGCTTGGAGGATCTCTTGGGG
ACATTAACAAAGCAGGGACGAGCATGTGAAAGCCGATACCGAAGCGCTCA
CAAGAAATACGAGCAGGCCGTCCAGCTGGCGACCAATGCCTGCGACATTT
TGACCGAGAAAGGCCAGTCTCTTCCATCTCTTGATATAAAACTTCTGCAT
CAACGATATTCCAACTCTTCTCGTGCCGCTAGTCCTGCTACACCATCGCC
ATTCGATTTAAAGAAGGAGGACTTCAGTGCTATCTTGGCGGGAAGCCCCA
GAAAGATCTCCGAAGCATTTACGCAGGCAGCGAAGAAGGATATAACCACC
TGGTTGCTCCCCCTTGATAAAGGTCGGCGGGATGACCTCGATACGATCGC
CAAAAATCACCTTGAGATGGCTGAACTGTTTCGGTTTGCTTGTTTGGAGA
GATTCGACGAACTCAGTACATTCGCACGCCGCGCGGCGCATGAACTTCAG
AGAGTCCTGTGTCATTATCAATCATGCGAGGAGCGCTGTATTGAGAGGCT
GGCCGTAGTACTCCGGAAACAGATCGTGTTCGAGTCCAGCTGTCTCGCGA
ACGAGCAGTTTGAGGCTCAAATCATTTTCAAGGTTATCGAAGCCATGGAT
AAGGACAAGGACCTAGAGGCCTTCATCCATGCGCATAAAGTGCCATTCCC
AGGAGCCGATGTTGACAGCACGCTCAAGAGCCTCGGGTTGATAGGGAACC
CCTTGCCCGCACCACCCGCTTCTCCAGAGGAAATTGGCAAGAGTACATGC
GATGAAAATCTTTTACATGCGAGCGGCACCGTGATTGTCGGTAGAGAAGA
TCTGCCCCACCTCAGTAGCCCCGCCCCCCGCGTCGTTCCTGCGACCACCG
TCCTTCGCCTCCTCGGGGGGAATTTGTCGGCTTCCGGCACTCCTACACCG
ACGCCTCATCATTCTTCGACTCTGCGCACCACAAATGGGAACCCGTTCTC
GGACTTCTCCTCCATGCTGAACAAGAGTCTCAGGTCTCCTCTCGCAGCAG
CCCTATCCTCGAAAAACGCTGCTCCCCCTCCCGACGCGCCCTCGCAGGTC
CTCATGTCCCCACCAGTCCCTGAAGTCGGCCTCGAAGGTCTTCCTTTCGA
ACTTCAGGCCCCTCCCTCCGTGCGGCTGGGCAATATGGTCGAGCCCACTC
AGAGCCTGGACGACGAAGGCCACGACAGCGTGGAAGACGAGATCGAGGAG
GGGGAAAATGACGATGAGGGATTTTCCGCGTTGCAGAAACATGCACGACG
TTTACGAGGGGTTGCAAAAGAGTATAGTCCCTACCAGGAGGAGGGAAATA
GATCAGCGATCAGCTCACCTTTGATACCGTTGGAGGAGATTCTCACAGCT
GATGGTGGAATCGAATATCGGCTGTAAATGGCCTCGGCCACGACGCCGGA
TTCATTGTTGAGCAGCCCTTCCAAACTTTCTACACACGACGAGAAAATTC
ATACTTCATCTCCTCCTTATTCCTTCGCCACCGATCTTTTGGGGTCCTTT
GAAAAAGTGAGGAAGAACCATACACAAACACTGAAGGTTCTGGAGGAGTT
AGCCATCATGATAAAAGGTCGGGCAGCTGTTGAGGAGGTATATTCTCAGC
AAATGGCGCGTCTGGTATCGGACCACACTCACGGTCTCCGCCGTTTAGGT
GAAGCATTGGCCCGCAAAGCTGGAGGTATGGGGGTCAATGAAGGAGATTC
TGTCGCTGAAACAAGCTCATGTACCATTGAGAGTACGTTTCGAGAATGTG
TGGAAAGTTTGAAAGCGGACATGCTTAATAGGTCTGTGCAACGCAAACAG
CTCGCTAAAAATATCCTTGCAGACGTATTCGCACCACTTGAAGACATATA
TGATAGGTTAGCATCTGAAAGCAGGGGCTTGGAGGATCTCTTGGGGACAT
TAACAAAGCAGGGACGAGCATGTGAAAGCCGATACCGAAGCGCTCACAAG
AAATACGAGCAGGCCGTCCAGCTGGCGACCAATGCCTGCGACATTTTGAC
CGAGAAAGGCCAGTCTCTTCCATCTCTTGATATAAAACTTCTGCATCAAC
GATATTCCAACTCTTCTCGTGCCGCTAGTCCTGCTACACCATCGCCATTC
GATTTAAAGAAGGAGGACTTCAGTGCTATCTTGGCGGGAAGCCCCAGAAA
GATCTCCGAAGCATTTACGCAGGCAGCGAAGAAGGATATAAC back to top
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