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Properties
| Property Name | Value |
|---|
| Product | Thioesterase superfamily |
| Orig transcript id | gnl|cribi|Naga_100059g5.8058.mrna |
| Orig protein id | gnl|cribi|Naga_100059g5.8058 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:518109..519401 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3025 ID=rna3025|Name=rna3025|organism=Nannochloropsis gaditana|type=mRNA|length=1274bp
GTGCTTTATGTAAAGCTCTCAATCGTCCACACACACGATTACAAATAAAC
AGGGCGTGATTATGGAAGTCGTATTCGCAAGTATGTGACAATTTGACTGA
TTTATCTCAGAAACATCTTGATAAATTCCAAGTCTCCATCTTCAGCCTTT
CTTTTCGAGCTCAAAGCTGAGCTTTCCTGCCGCTCTCCTGCTGTGATAGC
CGACATGGGGAAGCGAGGCCCAGGACTTGTCCGCCGTAAAGGAAATATGG
GTAGCCACAGTCGTAAGGACGAGTACATAACGGCGCCCGAGGGTCGCTGG
AATGGAGGAAAACAACAGAAACAGAAAGGAAAGCGATTCGACAAAGACGA
GGAGCAAAGGTTTATGCAACATGTCGAGGATCTTGGTGCACGAATTTTGA
CCATGGACTCAGACGGAAATTGTCTCTTTCGAGCTTTGGCTGACCAATTG
CGGGGACGGCCCGAGGATCATGGGGAAATTCGTCAACACGTCATCGACTT
CATAGAAGCACATGAAACAGATTTTGCGCCATTTGTGGAGGACGATGAGA
AATTCTCAGATTATGTACATAGGATGCGGAACGAAGGAGAGTGGGGAGGT
CAGCAAGAGATATGTGCTGCCAGTCGTTGTTTTCACGTCAACGTAGTCAT
TCATCAGCTAGACTGCCCACGCTTTGAAATTCTCTTCAAAGCTAGCGCGC
CAACCATTCATCTATCTTTCCACGGCGCTTCTCATTATAACAGCATTCGT
GCATGGGATGATCCCTGCCGGATGGGAGATCCTGCAAAGCCCTTTCTGGC
TCTGACTGCCTTACCCCTCTCGACGTCAAAAACTTCAACACTCACATCCT
TCTCTTCTTCACCTTCCTTGGCGCCACATCGACGGGAGGGAAAATCGATA
CCGGGTGCAGAGATCAAAGAGCGAGGTGACGAAGATGATGAATTACGTAG
AAAGACGCGCAAGGAAATGGCAGATATCAGCGATGAGTCGGACGGCAGTA
TTGACCGTGACGAGCCTCGGGCAACAGAAGAGAAAGTCTTGAAAAGGGGC
GGTCAGTGTCCGTGTCGATCTGGAAAGAAGTGGCGGAAGTGCTGTCGCAA
AGTTGAGAGACAACGGCAGCGTCACATTCACCACATGAATGGATATAATG
CAATGAGGCACGAACAGGTCCATGAAGAACATGTAAAAAATGGCATCGGA
GAAGAAAAACTAGCTGTCAGACTAGCCGCCATCTCACTGTAAGATATAAA
GAAAGACCAATGCAACGTCATTTA back to topprotein sequence of rna3025 >rna3025-protein ID=rna3025-protein|Name=rna3025|organism=Nannochloropsis gaditana|type=polypeptide|length=430bp
MSRLWPTLVAKKLPRTGNKWRFHISSTIPPLVLFRRRLGTPKKTSGLGRF
KSPIITHLWSQRATGKELEIDVRSPTEPVERTPSESQTSVTYEFTREPFL
SQSYENPWGFFRKGKLLEDMDALAGNVAFKHCEKDGKVPLLVTASVDRIR
LSSNPKLDRDMEMTGRVVWTGSSSMQIDLEVHALPDAKPWISASFTFVAR
HPQTAKATAINKLKPESAAERETFSAVEQKNQRRKTVRKAKGTEGSPSLK
SGAVDVETMIKLLLSQARPLMEMPCLADPTCVLVDNTRASNSSIMQPQQR
NMLNRVFGGFLMRRAYEIAYSTCYLFAGSRPEFFQVAHVDFTSPVDVGDL
MRFDAAVLYTHTGQQTGSPHVHVQVVASICRPETVHSTISNTFNFVFRVP
GRPTVRKVLPANLDQAKRMIERMTAVLEDD back to topmRNA from alignment at CM002460.1:518109..519401+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3025 ID=rna3025|Name=rna3025|organism=Nannochloropsis gaditana|type=mRNA|length=1293bp|location=Sequence derived from alignment at CM002460.1:518109..519401+ (Nannochloropsis gaditana)
ATGTCACGCCTGTGGCCAACTTTGGTGGCCAAAAAGCTTCCGCGTACAGG
CAATAAATGGCGCTTCCACATCTCATCAACTATCCCACCACTTGTCCTCT
TTCGTCGGCGGCTGGGTACGCCCAAAAAAACAAGCGGGCTTGGTCGCTTC
AAGTCGCCTATTATCACGCACCTGTGGTCACAACGAGCAACTGGCAAGGA
ATTAGAGATAGACGTTCGTTCTCCGACGGAGCCTGTAGAGCGAACCCCTA
GCGAATCCCAAACGTCTGTGACGTATGAGTTCACTCGGGAACCTTTTCTG
TCTCAAAGCTACGAAAACCCTTGGGGATTTTTCCGGAAAGGAAAGCTCTT
GGAAGATATGGACGCACTCGCTGGGAACGTTGCTTTTAAACATTGCGAAA
AGGACGGCAAGGTTCCATTGCTTGTAACGGCAAGTGTAGATAGGATTAGA
CTTTCGAGCAATCCTAAATTGGATCGCGACATGGAGATGACGGGGCGAGT
TGTATGGACAGGGTCTTCAAGCATGCAGATAGATTTAGAGGTGCATGCAT
TGCCTGATGCCAAGCCTTGGATAAGTGCATCCTTCACATTTGTAGCCCGG
CACCCTCAGACGGCTAAAGCAACGGCCATCAACAAGTTGAAGCCGGAGAG
TGCCGCAGAGAGGGAAACATTCTCAGCAGTGGAACAAAAAAATCAACGCC
GTAAGACAGTGCGCAAGGCAAAAGGGACAGAAGGCAGCCCGTCCCTAAAA
TCGGGAGCGGTGGACGTAGAGACCATGATAAAATTGTTGTTGAGTCAAGC
GCGCCCTTTGATGGAAATGCCTTGCCTTGCGGACCCTACATGCGTTTTGG
TGGATAACACACGGGCATCGAACTCCAGCATAATGCAGCCTCAGCAACGC
AATATGCTGAATCGTGTCTTTGGTGGTTTTTTGATGAGAAGAGCTTATGA
AATCGCGTATTCCACTTGCTATCTGTTTGCGGGGAGTCGACCAGAATTTT
TCCAGGTGGCGCACGTCGATTTCACGAGTCCCGTAGATGTGGGAGACCTG
ATGCGTTTTGACGCTGCTGTCCTCTACACGCACACAGGCCAACAAACGGG
CTCGCCCCACGTGCATGTCCAGGTCGTGGCGTCCATCTGTCGGCCCGAGA
CAGTGCACAGCACCATCTCCAACACCTTCAATTTCGTCTTTCGTGTGCCC
GGGAGGCCCACGGTTCGAAAGGTGCTGCCCGCCAACTTGGATCAAGCGAA
GCGAATGATCGAGCGCATGACCGCGGTACTGGAAGACGATTGA back to topCoding sequence (CDS) from alignment at CM002460.1:518109..519401+ >rna3025 ID=rna3025|Name=rna3025|organism=Nannochloropsis gaditana|type=CDS|length=1293bp|location=Sequence derived from alignment at CM002460.1:518109..519401+ (Nannochloropsis gaditana)
ATGTCACGCCTGTGGCCAACTTTGGTGGCCAAAAAGCTTCCGCGTACAGG
CAATAAATGGCGCTTCCACATCTCATCAACTATCCCACCACTTGTCCTCT
TTCGTCGGCGGCTGGGTACGCCCAAAAAAACAAGCGGGCTTGGTCGCTTC
AAGTCGCCTATTATCACGCACCTGTGGTCACAACGAGCAACTGGCAAGGA
ATTAGAGATAGACGTTCGTTCTCCGACGGAGCCTGTAGAGCGAACCCCTA
GCGAATCCCAAACGTCTGTGACGTATGAGTTCACTCGGGAACCTTTTCTG
TCTCAAAGCTACGAAAACCCTTGGGGATTTTTCCGGAAAGGAAAGCTCTT
GGAAGATATGGACGCACTCGCTGGGAACGTTGCTTTTAAACATTGCGAAA
AGGACGGCAAGGTTCCATTGCTTGTAACGGCAAGTGTAGATAGGATTAGA
CTTTCGAGCAATCCTAAATTGGATCGCGACATGGAGATGACGGGGCGAGT
TGTATGGACAGGGTCTTCAAGCATGCAGATAGATTTAGAGGTGCATGCAT
TGCCTGATGCCAAGCCTTGGATAAGTGCATCCTTCACATTTGTAGCCCGG
CACCCTCAGACGGCTAAAGCAACGGCCATCAACAAGTTGAAGCCGGAGAG
TGCCGCAGAGAGGGAAACATTCTCAGCAGTGGAACAAAAAAATCAACGCC
GTAAGACAGTGCGCAAGGCAAAAGGGACAGAAGGCAGCCCGTCCCTAAAA
TCGGGAGCGGTGGACGTAGAGACCATGATAAAATTGTTGTTGAGTCAAGC
GCGCCCTTTGATGGAAATGCCTTGCCTTGCGGACCCTACATGCGTTTTGG
TGGATAACACACGGGCATCGAACTCCAGCATAATGCAGCCTCAGCAACGC
AATATGCTGAATCGTGTCTTTGGTGGTTTTTTGATGAGAAGAGCTTATGA
AATCGCGTATTCCACTTGCTATCTGTTTGCGGGGAGTCGACCAGAATTTT
TCCAGGTGGCGCACGTCGATTTCACGAGTCCCGTAGATGTGGGAGACCTG
ATGCGTTTTGACGCTGCTGTCCTCTACACGCACACAGGCCAACAAACGGG
CTCGCCCCACGTGCATGTCCAGGTCGTGGCGTCCATCTGTCGGCCCGAGA
CAGTGCACAGCACCATCTCCAACACCTTCAATTTCGTCTTTCGTGTGCCC
GGGAGGCCCACGGTTCGAAAGGTGCTGCCCGCCAACTTGGATCAAGCGAA
GCGAATGATCGAGCGCATGACCGCGGTACTGGAAGACGATTGA back to top
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