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Properties
| Property Name | Value |
|---|
| Product | exo-beta- -glucanase |
| Orig transcript id | gnl|cribi|Naga_100034g4.6291.mrna |
| Orig protein id | gnl|cribi|Naga_100034g4.6291 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:397702..400680 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2975 ID=rna2975|Name=rna2975|organism=Nannochloropsis gaditana|type=mRNA|length=1037bp
CACGCCAATCACTCCCTGCAGCATCCCTCCTCACCTCTGCTCACTGCCAT
GGCGCCGCCTTTCGCGGAGGCTCGCCTGCGAATTGCCACCTCTTAAGCCC
ACCAGGACCTGGCTCTGGCAAGGGCAACAGGGCTTCGCTTTATACCCCCC
CCACATTGCCCTGGCGCTCATTCTTGCGTCAAAGGGTAGTAACCTCTACA
AAAGCGGCGATGTCTTTACCCCGTGCGGAGGAGAGGCCGGAGTCACAGGA
TGTTTCGCTCGATGCGCTGCTAAGTATCCGGCATCAACGCTTGGTGAGGC
ATGTAAAAGCTGTATCCGGAGACCATCGTCGGCACGTGCTGGCCTATTGC
CGGCAATATGAGGCTGGTCAGAGCATTCATGAAATAGCTCGCCGTCTGTG
TTATCCCCCCTACTTACTGGCGCGCATGCTCGTGGAAGTTTTGTGTAAGG
TCGGGACACGCACAAAGGTGACAGAATTGATGCGGGCTCCTCACCTTATC
GCGAATCATCGATTACGCCGTGAAGTTATGCATTGCATCGCAGTCGACAG
AGATTTTTCGCCCGGTGCTGATCGCGTGTCTCGAAGCATCGGATTGGACT
ACGAGCGGGAGCTGCAATTGCGCTTGCGAGCTTTGGCTATTCCTTTCGAA
GACGAAGCTATGTTGCGTGCACGAGGCCTGCCCAAGACGCCAGATGTCCG
CTTGTCGGTCCCTCTAGGCGTGGTTGACGCTTGCGGGAAGCACCACGTCG
TAAACTGGATAGACAGCAAGGCCCTTTATGGCACGCGAGAAACCTTCGAG
GGGGAGGTCTTGCCGCAGGTTACACGGTACGTCAATCGGTTCGGACCGGG
GTGCGTCGTGTTCTGGTTCGGGTTCTGCCCGGGTGTTCAGGAGCTCCTGT
CCTTGCAAGAATGCCACGTTGTGGTAATAGATGACTTTCCGCCGCCGGTC
GAGAAACTAGTACTCCTAAATGGAGATGTGCTGGAAAGAATGTGACTGTC
CGTGCGCCAAAAAAGTAGTTTCAATGGGGCCTAGTGG back to topprotein sequence of rna2975 >rna2975-protein ID=rna2975-protein|Name=rna2975|organism=Nannochloropsis gaditana|type=polypeptide|length=750bp
MSPGLYFSVCLVAISLIAGVTGFSWPWSSTRDPPKATPPHAQIGSIIKSS
SVSHHTKLVDGTIMMEWRSKPPRGAYAHRTVDPSNMICRLDPKVTASTIL
DFQTEIGELWGGACGRNRGVFILEPADGKTYDCGNLPESWGIPNVGSLLS
AQPAKAVTALANYISAVYNSTVVKGPSACDFNALAYLTCGREEPWRTVPW
YNKIKNPIRAVNIGGLFVLEQWILPGFVTWGEETGIWDQYTFSSECKKMG
ICDQLKQHWETWYSADDFLQMKKFGLNTIRLPVGYWYFAERVGLNPAPYL
VPDQDLFDAHHPITNVIRWADEAGLQVILDLHGAPYSQNGLDNSGRMTDD
PNVHNWGETWLYDETAISETVQILSSMALYIKFLSEEQHLDNVMMLELVN
EPWVFLDMGMVRDFYILAISSVRAVLPDMPILLHDSFHGDMWAMMLKYFP
FDNVYMDTHIYHGFNPSDIASDSYQADKQKMYVHERMSCAMTSMLRYETC
SAAPTITGEFSLAIDNCMNAIDRKFQDYGQCDRIARRSTDPWWKDHIRSF
AHRQMDVYERELGWSFWTYKLDKHAETTAESAPLWSFRLAVKEGYIDTSY
PPHACRYDPVADWQDKAPTAAPASKPAPDSAPADEGVVSKPKLAREQDVK
TETGEDADLVLLAPPEETPGGRAPQRMSASTYPGWVLTFIGVAALIGAGV
LLAHRYTGGRPLSVLTTQLSSAMQAVLPSSVHRGQYETVGDSSMPVGTQC back to topmRNA from alignment at CM002460.1:397702..400680- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2975 ID=rna2975|Name=rna2975|organism=Nannochloropsis gaditana|type=mRNA|length=2979bp|location=Sequence derived from alignment at CM002460.1:397702..400680- (Nannochloropsis gaditana)
TCTTACCCTCGTGGGCTCCTGCACAGCTATGTCACCAGGATTATACTTTT
CCGTGTGTCTGGTGGCAATAAGCCTGATTGCGGGCGTCACTGGCTTCTCC
TGGCCATGGTCCTCTACCAGAGACCCTCCAAAAGCTACCCCTCCGCACGC
CCAAATCGGGTCAATCATCAAATCTTCCAGCGTTTCCCATCACACAAAGC
TAGTTGACGGTACTATTATGATGGAATGGCGATCTAAACCTCCACGTGGG
GCGTATGCGCACCGGACTGTCGATCCTTCAAACATGATATGTAGGCTGGA
CCCTAAAGTGACCGCCTCTACCATCCTCGATTTCCAGACGGAGATTGGGG
AGCTGTGGGGCGGCGCATGCGGGCGGAACCGCGGAGTTTTTATCCTGGAG
CCGGCTGATGGCAAAACCTACGATTGCGGTAACTTGCCGGAATCATGGGG
GATTCCAAACGTTGGTTCGCTCTTGTCCGCGCAGCCTGCGAAAGCAGTGA
CCGCCCTCGCGAATTATATCTCGGCCGTTTACAATAGCACTGTCGTCAAA
GGTCCATCTGCATGCGACTTTAATGCGTTAGCTTACTTGACTTGCGGAAG
AGAGGAGCCCTGGAGGACAGTGCCGTGGTACAACAAGATCAAGAATCCTA
TCCGTGCGGTGAATATTGGGGGCCTCTTCGTGCTCGAGCAGTGGATCTTG
CCGGGATTCGTGACATGGGGCGAGGAGACAGGCATCTGGGACCAGTACAC
GTTTTCTTCCGAATGTAAAAAGATGGGCATTTGTGACCAACTAAAGCAGC
ATTGGGAGACTTGGTACAGTGCAGACGATTTCCTTCAGATGAAGAAGTAA
GTGACCTCTCATACCTGAGAGGCATGTCTGGGTCGGGAGAGAGCATTTCG
AATCTCACAAAAGCCATGATGGAAAATGTACTTCATTAAATGGATCAAAA
TGTTGTCCTTGTCGGAGATAGTTTCCTTGCTTCATCGACGCAGGGTCTAC
TAGATTGCCGATGTAGTCTCATGCCCATGCCTCGCTATCTCATCAGGTTC
GGACTCAACACGATTCGTCTTCCTGTCGGGTACTGGTACTTCGCGGAGAG
GGTCGGCCTGAACCCGGCACCCTACCTCGTGCCCGATCAGGACCTTTTCG
ACGCGCACCATCCCATAACGAACGTGATCCGGTGGGCCGATGAGGCCGGG
CTGCAGGTGATCCTCGACCTCCACGGGGCTCCCTACAGTCAGAACGGCCT
GGACAACTCGGGGAGAATGACCGACGATCCCAACGTCCACAACTGGGGCG
AGACATGGCTCTACGACGAGACGGCCATCAGCGAGACCGTCCAGATCCTG
TCGAGCATGGCCCTGTACATCAAGTTCCTGTCCGAGGAGCAGCATCTCGA
CAACGTGATGATGCTGGAGCTGGTCAACGAGCCTTGGGTTTTCCTTGACA
TGGGCATGGTGCGGGACTTCTACATTCTGGCCATCTCGTCCGTGCGCGCC
GTCCTCCCCGATATGCCCATCCTCCTGCACGACTCCTTTCACGGAGACAT
GTGGGCCATGATGCTCAAGTACTTCCCCTTCGACAACGTCTACATGGACA
CACACATTTACCACGGCTTCAATCCATCCGATATTGCCTCGGACTCGTAC
CAGGCGGACAAACAGAAGATGTACGTGCACGAGCGCATGTCTTGCGCTAT
GACCTCCATGCTGCGCTACGAGACTTGCTCGGCTGCGCCCACCATCACCG
GAGAATTCAGTCTGGCAATCGACAACTGCATGAACGCTATCGACAGGAAG
TTTCAGGACTACGGACAGTGCGATCGTATTGCCCGGCGCAGCACTGATCC
CTGGTGGAAAGACCACATCCGCTCCTTCGCCCACCGACAAATGGATGTGT
ACGAGCGCGAGCTAGGATGGTCATTCTGGACCTACAAATTGGATAAGCAC
GCTGAGACCACGGCCGAGTCGGCCCCCCTTTGGAGCTTCCGTCTGGCGGT
CAAGGAGGGGTATATCGACACCAGTTACCCTCCCCACGCCTGCAGGTATG
ATCCCGTTGCAGACTGGCAGGACAAGGCCCCCACAGCCGCCCCCGCGTCA
AAGCCTGCCCCTGACAGCGCCCCTGCAGACGAGGGTGTGGTTTCGAAGCC
CAAACTGGCGCGGGAGCAAGATGTGAAGACGGAGACTGGGGAGGACGCGG
ACTTGGTCCTTCTCGCGCCTCCTGAGGAGACCCCCGGGGGCAGAGCTCCT
CAAAGGATGTCTGCGTCTACCTATCCTGGCTGGGTCCTCACTTTCATCGG
TGTGGCGGCTCTAATCGGGGCTGGTGTCCTTCTGGCACACCGTTACACAG
GTGGCAGGCCCCTCAGCGTCTTGACGACACAACTTTCATCAGCGATGCAG
GCTGTGCTGCCGAGTTCTGTTCATCGCGGGCAGTACGAGACAGTGGGGGA
TTCTAGCATGCCTGTAGGCACGCAATGCTAAATAATCCGGAAGGTGGGCG
TAGAATCGTCGAATAAAGAGTGGGAATGAATTTACACGAATTGCCGACTA
GTAGAAGTCTACCCAGAAAGACGGAAGAAGTTAGACAAGATAGTTACTTA
AGGTGGTTACATTTCTGGACTTGATGAGACGAATTTACTTATCCATTGAT
TGCTGCAATTTCATGATATATGCCAAAGGGGGCCGTATTGAGTATTTATT
TTGATATCCAGAATTGAGATGAAGATTGTAACCTGAATGGCTCGCATGGA
AACGGGTTGAAGAGCTTGAACACTTTTTGAGAAATGTGGCGATACATGGA
GAGGAGGAAAGGGCTGTGGGGATGCCTCGTGTATTCGGAACGCACCGAAA
GGGAATGAACTACAGAGTCGCAGAAAATATGTGAGACGTGGATAGAGTGC
GAGGTGACGGGGTCAGACATCTGCCGGTTGAGGTGCCCATTTCGGGAAAG
AAACATTATCACTTCGCATCTGACTGCCC back to topCoding sequence (CDS) from alignment at CM002460.1:397702..400680- >rna2975 ID=rna2975|Name=rna2975|organism=Nannochloropsis gaditana|type=CDS|length=4506bp|location=Sequence derived from alignment at CM002460.1:397702..400680- (Nannochloropsis gaditana)
GTTCGGACTCAACACGATTCGTCTTCCTGTCGGGTACTGGTACTTCGCGG
AGAGGGTCGGCCTGAACCCGGCACCCTACCTCGTGCCCGATCAGGACCTT
TTCGACGCGCACCATCCCATAACGAACGTGATCCGGTGGGCCGATGAGGC
CGGGCTGCAGGTGATCCTCGACCTCCACGGGGCTCCCTACAGTCAGAACG
GCCTGGACAACTCGGGGAGAATGACCGACGATCCCAACGTCCACAACTGG
GGCGAGACATGGCTCTACGACGAGACGGCCATCAGCGAGACCGTCCAGAT
CCTGTCGAGCATGGCCCTGTACATCAAGTTCCTGTCCGAGGAGCAGCATC
TCGACAACGTGATGATGCTGGAGCTGGTCAACGAGCCTTGGGTTTTCCTT
GACATGGGCATGGTGCGGGACTTCTACATTCTGGCCATCTCGTCCGTGCG
CGCCGTCCTCCCCGATATGCCCATCCTCCTGCACGACTCCTTTCACGGAG
ACATGTGGGCCATGATGCTCAAGTACTTCCCCTTCGACAACGTCTACATG
GACACACACATTTACCACGGCTTCAATCCATCCGATATTGCCTCGGACTC
GTACCAGGCGGACAAACAGAAGATGTACGTGCACGAGCGCATGTCTTGCG
CTATGACCTCCATGCTGCGCTACGAGACTTGCTCGGCTGCGCCCACCATC
ACCGGAGAATTCAGTCTGGCAATCGACAACTGCATGAACGCTATCGACAG
GAAGTTTCAGGACTACGGACAGTGCGATCGTATTGCCCGGCGCAGCACTG
ATCCCTGGTGGAAAGACCACATCCGCTCCTTCGCCCACCGACAAATGGAT
GTGTACGAGCGCGAGCTAGGATGGTCATTCTGGACCTACAAATTGGATAA
GCACGCTGAGACCACGGCCGAGTCGGCCCCCCTTTGGAGCTTCCGTCTGG
CGGTCAAGGAGGGGTATATCGACACCAGTTACCCTCCCCACGCCTGCAGG
TATGATCCCGTTGCAGACTGGCAGGACAAGGCCCCCACAGCCGCCCCCGC
GTCAAAGCCTGCCCCTGACAGCGCCCCTGCAGACGAGGGTGTGGTTTCGA
AGCCCAAACTGGCGCGGGAGCAAGATGTGAAGACGGAGACTGGGGAGGAC
GCGGACTTGGTCCTTCTCGCGCCTCCTGAGGAGACCCCCGGGGGCAGAGC
TCCTCAAAGGATGTCTGCGTCTACCTATCCTGGCTGGGTCCTCACTTTCA
TCGGTGTGGCGGCTCTAATCGGGGCTGGTGTCCTTCTGGCACACCGTTAC
ACAGGTGGCAGGCCCCTCAGCGTCTTGACGACACAACTTTCATCAGCGAT
GCAGGCTGTGCTGCCGAGTTCTGTTCATCGCGGGCAGTACGAGACAGTGG
GGGATTCTAGCATGCCTGTAGGCACGCAATGCTAAATGTCACCAGGATTA
TACTTTTCCGTGTGTCTGGTGGCAATAAGCCTGATTGCGGGCGTCACTGG
CTTCTCCTGGCCATGGTCCTCTACCAGAGACCCTCCAAAAGCTACCCCTC
CGCACGCCCAAATCGGGTCAATCATCAAATCTTCCAGCGTTTCCCATCAC
ACAAAGCTAGTTGACGGTACTATTATGATGGAATGGCGATCTAAACCTCC
ACGTGGGGCGTATGCGCACCGGACTGTCGATCCTTCAAACATGATATGTA
GGCTGGACCCTAAAGTGACCGCCTCTACCATCCTCGATTTCCAGACGGAG
ATTGGGGAGCTGTGGGGCGGCGCATGCGGGCGGAACCGCGGAGTTTTTAT
CCTGGAGCCGGCTGATGGCAAAACCTACGATTGCGGTAACTTGCCGGAAT
CATGGGGGATTCCAAACGTTGGTTCGCTCTTGTCCGCGCAGCCTGCGAAA
GCAGTGACCGCCCTCGCGAATTATATCTCGGCCGTTTACAATAGCACTGT
CGTCAAAGGTCCATCTGCATGCGACTTTAATGCGTTAGCTTACTTGACTT
GCGGAAGAGAGGAGCCCTGGAGGACAGTGCCGTGGTACAACAAGATCAAG
AATCCTATCCGTGCGGTGAATATTGGGGGCCTCTTCGTGCTCGAGCAGTG
GATCTTGCCGGGATTCGTGACATGGGGCGAGGAGACAGGCATCTGGGACC
AGTACACGTTTTCTTCCGAATGTAAAAAGATGGGCATTTGTGACCAACTA
AAGCAGCATTGGGAGACTTGGTACAGTGCAGACGATTTCCTTCAGATGAA
GAAGTTCGGACTCAACACGATTCGTCTTCCTGTCGGGTACTGGTACTTCG
CGGAGAGGGTCGGCCTGAACCCGGCACCCTACCTCGTGCCCGATCAGGAC
CTTTTCGACGCGCACCATCCCATAACGAACGTGATCCGGTGGGCCGATGA
GGCCGGGCTGCAGGTGATCCTCGACCTCCACGGGGCTCCCTACAGTCAGA
ACGGCCTGGACAACTCGGGGAGAATGACCGACGATCCCAACGTCCACAAC
TGGGGCGAGACATGGCTCTACGACGAGACGGCCATCAGCGAGACCGTCCA
GATCCTGTCGAGCATGGCCCTGTACATCAAGTTCCTGTCCGAGGAGCAGC
ATCTCGACAACGTGATGATGCTGGAGCTGGTCAACGAGCCTTGGGTTTTC
CTTGACATGGGCATGGTGCGGGACTTCTACATTCTGGCCATCTCGTCCGT
GCGCGCCGTCCTCCCCGATATGCCCATCCTCCTGCACGACTCCTTTCACG
GAGACATGTGGGCCATGATGCTCAAGTACTTCCCCTTCGACAACGTCTAC
ATGGACACACACATTTACCACGGCTTCAATCCATCCGATATTGCCTCGGA
CTCGTACCAGGCGGACAAACAGAAGATGTACGTGCACGAGCGCATGTCTT
GCGCTATGACCTCCATGCTGCGCTACGAGACTTGCTCGGCTGCGCCCACC
ATCACCGGAGAATTCAGTCTGGCAATCGACAACTGCATGAACGCTATCGA
CAGGAAGTTTCAGGACTACGGACAGTGCGATCGTATTGCCCGGCGCAGCA
CTGATCCCTGGTGGAAAGACCACATCCGCTCCTTCGCCCACCGACAAATG
GATGTGTACGAGCGCGAGCTAGGATGGTCATTCTGGACCTACAAATTGGA
TAAGCACGCTGAGACCACGGCCGAGTCGGCCCCCCTTTGGAGCTTCCGTC
TGGCGGTCAAGGAGGGGTATATCGACACCAGTTACCCTCCCCACGCCTGC
AGGTATGATCCCGTTGCAGACTGGCAGGACAAGGCCCCCACAGCCGCCCC
CGCGTCAAAGCCTGCCCCTGACAGCGCCCCTGCAGACGAGGGTGTGGTTT
CGAAGCCCAAACTGGCGCGGGAGCAAGATGTGAAGACGGAGACTGGGGAG
GACGCGGACTTGGTCCTTCTCGCGCCTCCTGAGGAGACCCCCGGGGGCAG
AGCTCCTCAAAGGATGTCTGCGTCTACCTATCCTGGCTGGGTCCTCACTT
TCATCGGTGTGGCGGCTCTAATCGGGGCTGGTGTCCTTCTGGCACACCGT
TACACAGGTGGCAGGCCCCTCAGCGTCTTGACGACACAACTTTCATCAGC
GATGCAGGCTGTGCTGCCGAGTTCTGTTCATCGCGGGCAGTACGAGACAG
TGGGGGATTCTAGCATGCCTGTAGGCACGCAATGCTAAATGTCACCAGGA
TTATACTTTTCCGTGTGTCTGGTGGCAATAAGCCTGATTGCGGGCGTCAC
TGGCTTCTCCTGGCCATGGTCCTCTACCAGAGACCCTCCAAAAGCTACCC
CTCCGCACGCCCAAATCGGGTCAATCATCAAATCTTCCAGCGTTTCCCAT
CACACAAAGCTAGTTGACGGTACTATTATGATGGAATGGCGATCTAAACC
TCCACGTGGGGCGTATGCGCACCGGACTGTCGATCCTTCAAACATGATAT
GTAGGCTGGACCCTAAAGTGACCGCCTCTACCATCCTCGATTTCCAGACG
GAGATTGGGGAGCTGTGGGGCGGCGCATGCGGGCGGAACCGCGGAGTTTT
TATCCTGGAGCCGGCTGATGGCAAAACCTACGATTGCGGTAACTTGCCGG
AATCATGGGGGATTCCAAACGTTGGTTCGCTCTTGTCCGCGCAGCCTGCG
AAAGCAGTGACCGCCCTCGCGAATTATATCTCGGCCGTTTACAATAGCAC
TGTCGTCAAAGGTCCATCTGCATGCGACTTTAATGCGTTAGCTTACTTGA
CTTGCGGAAGAGAGGAGCCCTGGAGGACAGTGCCGTGGTACAACAAGATC
AAGAATCCTATCCGTGCGGTGAATATTGGGGGCCTCTTCGTGCTCGAGCA
GTGGATCTTGCCGGGATTCGTGACATGGGGCGAGGAGACAGGCATCTGGG
ACCAGTACACGTTTTCTTCCGAATGTAAAAAGATGGGCATTTGTGACCAA
CTAAAGCAGCATTGGGAGACTTGGTACAGTGCAGACGATTTCCTTCAGAT
GAAGAA back to top
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