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Properties
| Property Name | Value |
|---|
| Product | ribonucleoside-diphosphate reductase large subunit |
| Orig transcript id | gnl|cribi|Naga_100034g6.6305.mrna |
| Orig protein id | gnl|cribi|Naga_100034g6.6305 |
| Gene | RRL2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:392558..395922 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2973 ID=rna2973|Name=rna2973|organism=Nannochloropsis gaditana|type=mRNA|length=2774bp
CCGCGCATTAGAACGTGCAGGAGGGTCTATCGAGCTGTGTTGTCTCCTGG
AAAATAGAGCTGCTACGTGGTGGGGAGCAAGTCTTCGACCACACCTTAAT
CTGACTCCCCTCACATGGTGTTATCAGGTTGCAAAGAACGACATGGTGGG
TACAACAATCTGCGCAAGCTGAGCCTACGCCGACATCAGCACTGTTCTCC
ATCAAGCAGTGCGCAGGTTACACCACCAATTGGCAGTGATTCCATTGCCT
TTATGAAGGCGCTCTCATGTTTTCGGCTAGTGCTGGGATTGGTGGCGGTG
AACGCGTTTCGCTTCACTTACAAGACACGTGTGGCCAAAGCGAAAGGGAG
TCGCATGCCCGTCTTCTCGTTCAACGAGAAATCTACTCCAGGGACCACCC
TTGGCACCGAGAGCGACAGACCAAGGGCGCAAGGGAGTAGCGGCGTGCTT
CGGCTAAAAAAATTGCTACAACGGCGGCTCCTGTTTGTGGTCGAGACCTT
GGGGGGCATAGACCGCGCAGCACTCTATTTAACGCGGCGGGACTTAGCCG
GGGACGGATTAGAGCTCTTTCCAGCGGCGGTCTTCCCCGCAGCTGAGGAT
GACTGGATGATAGGTCATGTGGGCGCCATCCAACCGAAGAAAAAACTCTA
CCGGAACGGAAACGGCGCCACTCCGCCCACCTTCTTCCTGGCCTCAGGCG
AGTTGGCTGTTCGCATTTGCTACGGAGCGCAGCTCATCGCCGTGCTGGTT
GTGGACGATGAGGAGCACCGCAAGACGAGGATGAAACCGACGGGGGACGC
GAGGGGCGAAACTGGGCTCCAGCGTTCGGCTGTGCGCATGCACCGCATCG
AGGAGGTGGCCACGCGCGTTTTCGCCGCCGCCCTGAAGGACACCCTTGTG
ATCGATCAGCGAGCACTCGCGCTCAATTCGTCCTCGTCCACATTTGTGCG
CACGGAGGTACTGCCCTTTATCGGGACCGTGCCCGATGCGTCGGAGGGGC
TCCTGTCTGGGAAGCCTGCGGATGCTTCATCGAGCAACGGGAGCGAGGCC
GAGCAGGCCGATGAGGCGGCGGCCGAGGCGGGCGCATGGGCGGTAAATGC
GGAGGCATCGACGTCCTCTCTCCTGTCCTCGGACGTGACCGTCTCGGTGG
GCGGCGCGACAAACATCACGTTTGATCTGCACCTGCTGGAGGACTTCAAG
CACATTTTCGACGATATTCAGCTCAGCGGGCTCCGGCTTGAGAACAACAC
GAATCTTTTCATCCTCCAGGTGGCCGCTCCTGTGGTGGCTGCATTGGCCC
TGGAGCCCCTCATCTCCCTGGTTGACACCTATTACATCGGACACTTCCTG
GGTTCCGTGTCCCTGTCGGCCTACGGCATCTCCGAGAGGGTCTTCGTCTT
CAGCCTTTACATCCTCAATTTCCTGGCTACTTCCACAACCCCGATAGTGG
CCAATCTCCGAGCGCAGGGAGAGGAAGAGGCGGCCCGGGAGCTGGTGGGC
CGCTTGCTTTTCTTCGCGGGCATGTTCGGCCTGGCCCTGATCCCCATCCT
CCAGGCACTCTCGTATCCACTCATCAACCTGCTCGGTGCCGTTCCCGAGA
ACTACGCCGAGGCAGTCGAGTATTTCCAAGTGCGGAGCTGGGGAACACCC
GCGCTCATGCTGGTGGCGGTCTCGAACGGGGCGCTCCGGGGGTACCTGGA
TACGACTACTCCGCTCATCGTGGCCGCCATCGCCTTCATAGTGGACTACT
CCGTCGACCCCGAAGTCGTGTACCCTGCCGATCCCAAGGGCTTGGGTGCC
GCAGGAGCCGCGACGGTCATCGCCGAGTGGCTATCTGCGGGATTGTTCCT
GACCAAGTTTGTGAGTATGAAGCCGCCTATTCTCCCCGTCCTGGACCTCT
TCCCGCCCTGGGCAGAGATGGCACCCGTTGTCAAGGCCTCGGCGCAAATC
TTTATTCGCACCGTCCTTCTTCAAGCCCTTTTGGCCACGTCCTGCATCGC
TGCCGCACGCATCGGGCCCTTGGACATCGCCGCTCACCAAGTGGCGCTCC
AGCTCTGGATACCGCCGTCTTTCCTGACGGAGGCCTTTTCCATCGCTGCG
CAGGGCCTGGTGGCCGATGCCCTGGGTCGCGGCGACCGACTGCGAGGACG
GGAATTGAGCTTACTTTTGCTAAAGTGGGGCGTTGCGCTGGGGGGGGTAT
TGGCTGTATTCTGTGCGACGGCGCAGATTCTCCAACCTGACGTGCTTCCT
CGCTTCTTCACCGAGGATCAGGGCATACTTGACAAAGTGCACCCGATTGT
TTGGCTCATCGCAATCATGCAGCCCATCAATGGCCTCGTCAACGTGGGTG
GTGGCGTGCTACAAGGTGCGCAGGACTTCACGTACCAGGTTGTAACCATG
GGTCTGAGCGCACTTTTTGCTGGCTCGCTGTTCTTCCTCCTGCGGGACGA
GGGATTGACAGCTGTATGGGAGACGCTCCTAGCGTTTCAAGTCATGCGTG
CCGTACTCTTTGCGTACCGATTTGTTGAGCCCATGGGGCCGCTCAGTATT
GTGTCCGAGTCAAAGACCCAAAAAATTCTGGCAGGATCCCTTTTCAGGGG
ATGGGATCACGACAAACATGTGCCGAAGAAAAAAAAGAAGAAGAGGCGGC
GGCCTTGGTTTAACGATATGTAAAGTAAGTAGGGAAAGCCCAAAGCAAGT
GAGAGCAACGTGAGAGCTCTGTCTTTAAGATGCTCTGTACAAAACAAAAG
AAACTTACAGTTGTAGAAGACGAG back to topprotein sequence of rna2973 >rna2973-protein ID=rna2973-protein|Name=rna2973|organism=Nannochloropsis gaditana|type=polypeptide|length=788bp
MHVKKRDGRLEAVQFDKITARIKKLVYGLDANYVDPVVITQKVISGVYDG
VTTSELDELAAQTAAYCSTQHPDFSKLAARIAVSNLHKNTTKIFSDAIEQ
FRSYRHPKNGQPAALIAEDVYHIVMANKDRLNSSIIYDRDFDYDYFGFKT
LEKSYLLKMNGVVMERPQHMIMRVAIGIHKENIDAALETYNLMSLKLFTH
ATPTLFNAGTPRPQLSSCFLLTMKEDSIDGIYDTLKQCAAISKFAGGIGV
SIHNIRARDSYIRGSNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY
LEPWHADIFEFLDLRKNHGNELERARDLFYALWTPDLFMRRVESDGDWSL
FCPNECPGLADVCGEEFNQLYASYEKSGKARKVIKAQQLWFAILDSQVET
GTPYMLFKDACNLKSNQQNLGTIKSSNLCTEIIEYTSPDEVAVCNLASVN
LSAFIQGEGSGSGKTPTYDLQRLYEITKVVTRNLNRVIDINYYPVEEARR
SNMRHRPIGIGVQGLADAFIKMRFPFESPEAQQLNKDIFETMYFGAVEAS
MEIAMKEGPYETFAGSPMSKGVFQFDMWGVTPSTRWDWAGLRFKVQEHGV
RNSLLLAPMPTASTAQILGNNESVEPFTSNMYSRRVLAGEFTVVNKYLLR
DLIDQGLWTSEVRNQIMGNRGSVQNVASIPRELKDLYKTVWEIRQKCVID
QAADRGAYICQSQSLNIHLANPTPAQLTSMHFYSWKKGLKTGMYYLRTRP
KADAIQFTVDKSQLTQSEKAGAAASNKSEEEECLTCSA back to topmRNA from alignment at CM002460.1:392558..395922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2973 ID=rna2973|Name=rna2973|organism=Nannochloropsis gaditana|type=mRNA|length=3365bp|location=Sequence derived from alignment at CM002460.1:392558..395922+ (Nannochloropsis gaditana)
TCTGATTGAGGTCGGCCTGGTACATAGACCTGATCTGTTTTGACATTTAT
CAACATTGCCTGTATACTTAGCCAGTGTggcagcctccacctccctgcgG
AGGGCTCTCCCGCGCATAACGCGAGTGAAACCTGTCATTTTTTCTGCAGA
CTTTTGCCGGCCCAGGTGCCTGTTGCAAGCGTGCATGTAAGCCAGAGAGC
TGATCTACAAATAAATCTTGATTGTCAGGGCTCTGTCTTATGCGATGGTC
TGTTTACTCCGAACGGACGAAGAAGACCCGTCATCTCCATCTATGAGTCA
CGCAGACGATTGCTGTCCTCATCGATCAGCAAAAATCACCTCGTGCTCGT
GTTATTATACTAGTTGCCTGTAGAAGCTTGATCGTACTCTATCGTGACCC
ATCTATTAGTACTCACTTATaatctctttttcttctgaATAAAAACCTAC
TTCTCGGAAAGGTGCGCGGAAACAGACTCCAGAAGGATGCACGTCAAAAA
GCGCGATGGTCGCCTTGAAGCGGTACAGTTTGATAAGATTACGGCTCGCA
TCAAAAAGCTAGTCTACGGATTGGACGCCAACTACGTAGACCCCGTCGTC
ATAACCCAGAAGGTAATCAGCGGGGTCTACGACGGGGTGACCACCTCGGA
GCTAGACGAACTGGCCGCCCAGACGGCCGCCTACTGCTCCACGCAGCACC
CAGACTTCTCCAAGCTGGCAGCTCGTATCGCTGTGTCCAATCTGCACAAG
AATACAACCAAAATTTTCTCTGATGCGATTGAGCAGTTCCGCAGCTACCG
GCACCCGAAGAACGGGCAGCCTGCTGCGCTCATCGCTGAGGACGTCTATC
ACATTGTCATGGCCAACAAGGACCGCCTGAACTCGTCAATTATTTATGAC
CGGGACTTTGATTATGACTACTTTGGCTTTAAAACGCTGGAAAAGTCGTA
CCTTCTTAAGATGAACGGGGTAGTTATGGAGCGCCCCCAGCACATGATCA
TGCGTGTGGCAATTGGTATCCACAAAGAGAACATTGACGCGGCGCTGGAG
ACCTACAATCTCATGTCGCTCAAACTTTTCACGCATGCTACGCCTACACT
TTTCAATGCCGGCACACCGCGGCCCCaactctcctcctgcttcctcctga
cCATGAAGGAGGACTCCATCGACGGCATCTACGACACCCTCAAGCAATGC
GCTGCCATTTCCAAATTTGCGGGTGGGATTGGCGTATCCATCCACAACAT
TCGGGCGCGAGACTCCTACATTCGTGGATCGAACGGCACCTCCAACGGCA
TCGTACCTATGCTCCGCGTTTTCAACGATACGGCCCGCTACGTCGACCAG
GGCGGAGGCAAGCGCAAGGGTTCCTTCGCCATCTACCTAGAGCCCTGGCA
TGCAGACATCTTTGAATTCCTGGACCTGCGTAAGAACCACGGCAACGAGT
TGGAGCGTGCACGTGATCTGTTCTACGCCCTCTGGACGCCCGACCTGTTC
ATGCGGCGCGTGGAGAGCGACGGGGACTGGTCCCTTTTTTGCCCCAACGA
GTGCCCGGGCCTGGCGGACGTGTGCGGCGAGGAGTTTAACCAGCTCTACG
CCAGCTACGAGAAGAGTGGGAAAGCACGCAAGGTTATTAAGGCCCAGCAG
CTCTGGTTCGCGATTCTGGACTCCCAGGTGGAGACAGGCACGCCTTACAT
GCTGTTCAAGGACGCCTGCAACCTGAAATCAAACCAGCAGAACTTGGGCA
CCATCAAATCATCCAATCTGTGCACGGAGATCATCGAGTACACGTCGCCC
GATGAGGTCGCGGTCTGCAACCTGGCCTCCGTGAACCTTTCCGCATTCAT
CCAAGGGGAGGGCTCCGGTAGCGGGAAGACGCCCACTTACGACCTGCAGC
GGCTGTATGAAATCACGAAGGTGGTGACACGAAACCTGAACCGCGTCATA
GACATCAACTACTACCCTGTCGAGGAAGCCAGGCGCTCGAACATGCGACA
CCGCCCCATCGGGATCGGCGTGCAGGGTTTGGCGGACGCCTTCATCAAGA
TGCGATTCCCATTCGAGTCTCCGGAGGCCCAGCAGCTTAACAAGGACATT
TTCGAGACCATGTACTTCGGGGCGGTAGAGGCGTCGATGGAGATCGCGAT
GAAGGAGGGTCCCTACGAGACCTTCGCCGGCTCCCCCATGAGCAAGGGCG
TCTTCCAATTCGACATGTGGGGCGTGACCCCCTCAACTCGCTGGGACTGG
GCCGGTTTACGCTTCAAAGTGCAGGAGCACGGTGTCCGCAACTCACTATT
GCTCGCACCCATGCCTACCGCATCTACTGCGCAGATCCTGGGCAACAACG
AGTCTGTTGAGCCTTTCACATCGAACATGTACTCCCGTCGCGTGTTGGCG
GGCGAATTCACGGTGGTGAACAAGTACCTGCTCCGCGACCTCATCGACCA
AGGCCTGTGGACTTCTGAAGTCCGAAATCAAATTATGGGCAACAGGGGCT
CAGTCCAGAATGTGGCCAGCATCCCTCGGGAGCTCAAGGACCTGTACAAG
ACAGTGTGGGAGATCCGGCAGAAGTGCGTGATCGACCAGGCCGCCGACCG
CGGCGCCTACATCTGTCAGTCGCAGTCTCTCAATATCCATTTGGCCAATC
CGACGCCTGCACAGCTCACCTCCATGCACTTCTAttcctggaagaagggg
ctCAAGACCGGCATGTACTACCTACGGACCCGGCCCAAGGCGGATGCCAT
ACAGTTCACGGTGGATAAGAGCCAGTTGACGCAATCTGAAAAAGCAGGGG
CTGCCGCGAGCAATaagtcggaggaagaggagtgtTTGACATGCAGTGCG
TAAAGAGATTTTGTGTAGTGAGGTCACATGTCCTAGACCGGCGCAATGCA
GCAGGCCTTCTAGAGCGAGATGCGCAGCCCTCCAGTACGCCTCAGCAATT
GCGCTTGCAGCATCATGCAGAGATGCGACGGTGGTGGAATGGGAGCAGTG
TGAGTGGGCATTCTGACTGGACACTTCGTGCCTGCTTATCGGGATGGGGT
CTCTGTTTCCTGCCTTATCCCgacgcctcgtccacgactGCAAGGGCGTT
CGAGACCTGTAGATGACAGTAAGTAAGCATAGGCAAAGAATAGCAGCAGC
ATCCGGAAATTCAGGAAGGTGACTGTATACAACGATACCAGAAATAAACG
TGGGTGCTCAATACTTCCTCAACGGAAGTCACATTCGAGTGAAATATACT
CCGGGAGATCCGCTGGAGGATGCTGGTGACTCAGgacgaaaggaagaaaa
aagccaTACATTCAAAGATGTGTACGAACAAAGAAAATGAGACAATGAAG
AAGTATGCCTTTGTG back to topCoding sequence (CDS) from alignment at CM002460.1:392558..395922+ >rna2973 ID=rna2973|Name=rna2973|organism=Nannochloropsis gaditana|type=CDS|length=2367bp|location=Sequence derived from alignment at CM002460.1:392558..395922+ (Nannochloropsis gaditana)
ATGCACGTCAAAAAGCGCGATGGTCGCCTTGAAGCGGTACAGTTTGATAA
GATTACGGCTCGCATCAAAAAGCTAGTCTACGGATTGGACGCCAACTACG
TAGACCCCGTCGTCATAACCCAGAAGGTAATCAGCGGGGTCTACGACGGG
GTGACCACCTCGGAGCTAGACGAACTGGCCGCCCAGACGGCCGCCTACTG
CTCCACGCAGCACCCAGACTTCTCCAAGCTGGCAGCTCGTATCGCTGTGT
CCAATCTGCACAAGAATACAACCAAAATTTTCTCTGATGCGATTGAGCAG
TTCCGCAGCTACCGGCACCCGAAGAACGGGCAGCCTGCTGCGCTCATCGC
TGAGGACGTCTATCACATTGTCATGGCCAACAAGGACCGCCTGAACTCGT
CAATTATTTATGACCGGGACTTTGATTATGACTACTTTGGCTTTAAAACG
CTGGAAAAGTCGTACCTTCTTAAGATGAACGGGGTAGTTATGGAGCGCCC
CCAGCACATGATCATGCGTGTGGCAATTGGTATCCACAAAGAGAACATTG
ACGCGGCGCTGGAGACCTACAATCTCATGTCGCTCAAACTTTTCACGCAT
GCTACGCCTACACTTTTCAATGCCGGCACACCGCGGCCCCaactctcctc
ctgcttcctcctgacCATGAAGGAGGACTCCATCGACGGCATCTACGACA
CCCTCAAGCAATGCGCTGCCATTTCCAAATTTGCGGGTGGGATTGGCGTA
TCCATCCACAACATTCGGGCGCGAGACTCCTACATTCGTGGATCGAACGG
CACCTCCAACGGCATCGTACCTATGCTCCGCGTTTTCAACGATACGGCCC
GCTACGTCGACCAGGGCGGAGGCAAGCGCAAGGGTTCCTTCGCCATCTAC
CTAGAGCCCTGGCATGCAGACATCTTTGAATTCCTGGACCTGCGTAAGAA
CCACGGCAACGAGTTGGAGCGTGCACGTGATCTGTTCTACGCCCTCTGGA
CGCCCGACCTGTTCATGCGGCGCGTGGAGAGCGACGGGGACTGGTCCCTT
TTTTGCCCCAACGAGTGCCCGGGCCTGGCGGACGTGTGCGGCGAGGAGTT
TAACCAGCTCTACGCCAGCTACGAGAAGAGTGGGAAAGCACGCAAGGTTA
TTAAGGCCCAGCAGCTCTGGTTCGCGATTCTGGACTCCCAGGTGGAGACA
GGCACGCCTTACATGCTGTTCAAGGACGCCTGCAACCTGAAATCAAACCA
GCAGAACTTGGGCACCATCAAATCATCCAATCTGTGCACGGAGATCATCG
AGTACACGTCGCCCGATGAGGTCGCGGTCTGCAACCTGGCCTCCGTGAAC
CTTTCCGCATTCATCCAAGGGGAGGGCTCCGGTAGCGGGAAGACGCCCAC
TTACGACCTGCAGCGGCTGTATGAAATCACGAAGGTGGTGACACGAAACC
TGAACCGCGTCATAGACATCAACTACTACCCTGTCGAGGAAGCCAGGCGC
TCGAACATGCGACACCGCCCCATCGGGATCGGCGTGCAGGGTTTGGCGGA
CGCCTTCATCAAGATGCGATTCCCATTCGAGTCTCCGGAGGCCCAGCAGC
TTAACAAGGACATTTTCGAGACCATGTACTTCGGGGCGGTAGAGGCGTCG
ATGGAGATCGCGATGAAGGAGGGTCCCTACGAGACCTTCGCCGGCTCCCC
CATGAGCAAGGGCGTCTTCCAATTCGACATGTGGGGCGTGACCCCCTCAA
CTCGCTGGGACTGGGCCGGTTTACGCTTCAAAGTGCAGGAGCACGGTGTC
CGCAACTCACTATTGCTCGCACCCATGCCTACCGCATCTACTGCGCAGAT
CCTGGGCAACAACGAGTCTGTTGAGCCTTTCACATCGAACATGTACTCCC
GTCGCGTGTTGGCGGGCGAATTCACGGTGGTGAACAAGTACCTGCTCCGC
GACCTCATCGACCAAGGCCTGTGGACTTCTGAAGTCCGAAATCAAATTAT
GGGCAACAGGGGCTCAGTCCAGAATGTGGCCAGCATCCCTCGGGAGCTCA
AGGACCTGTACAAGACAGTGTGGGAGATCCGGCAGAAGTGCGTGATCGAC
CAGGCCGCCGACCGCGGCGCCTACATCTGTCAGTCGCAGTCTCTCAATAT
CCATTTGGCCAATCCGACGCCTGCACAGCTCACCTCCATGCACTTCTAtt
cctggaagaaggggctCAAGACCGGCATGTACTACCTACGGACCCGGCCC
AAGGCGGATGCCATACAGTTCACGGTGGATAAGAGCCAGTTGACGCAATC
TGAAAAAGCAGGGGCTGCCGCGAGCAATaagtcggaggaagaggagtgtT
TGACATGCAGTGCGTAA back to top
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