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Properties
| Property Name | Value |
|---|
| Product | betaine aldehyde dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100034g16.6316.mrna |
| Orig protein id | gnl|cribi|Naga_100034g16.6316 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:367258..369370 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2963 ID=rna2963|Name=rna2963|organism=Nannochloropsis gaditana|type=mRNA|length=2634bp
ATGCATTAGAAGTATGTCCATCTCACAGGTAAAGCAGCCACAAGGGTAGC
ATTACGACGTCTTGGGTGTATCCCGGCATGACTAGCGCTAACACGTCAAG
CTATGCTTCGAGTGCGGGGCCTGGCCTAGTTGGTTTCATGTCATCATTGG
ACACTCTTACTGGTTGGGTGGAGGACAGCACAAGGCATGGAGAGGTCATA
GCTATGGGAGAGCAGCTGAGACGTGTGCAGTATGCTTACAAATGCCTCAG
AGAGAAGGCTGAGGTCGCGGACCCGAAAATATTGACGGCTTTGGGCAGAG
TTCTGGCACACTTCCTGGAACGAATCGATGACGAGTCTCTGTGTCGCGAT
GCCTGCAGTTTTGTTCCCTCATTGGCGAGAGGATGCGCCTACCGTGGCGC
CGACTGGGCTGTGTCCCTCATGCCGTACTTGCTGACATGTCTCGAACAAG
AACACAGCACCATCAATACCACGGCTTACCAGAGTCTGGTTGCAATGGTT
TCTCACTGCTACGATGCGAAGGGCCGCTTACTCGCATCAATTTTGAATGC
GATGGACAGAAACATAGGGCGGCAACTGCATCAACTTGTTAAAATTGTGA
TCGAAAAGTGGCCGCCGTCATCAGTCCAAGCGCATATGCCGGCTCTCTGC
GAGCGCCTAGTCATAGACATCAGATCTTCAAATAAGGCACAGCGTGATTG
GGCAACCCAGAGTTTCTTGGCCCTCAACCGGAAATGGCCGACGCAAGGAT
CGCAAGTCTTCCAAGCTTTGCCGCGGGAGATCCAGATTAGATTGGCGCGC
GATCATCCGCACCTGGAGATGCTGCGGCAAAAGCCACGCTATTCTCCCTC
GTATAAATCCCCGTCGAACTCGAAGAAAAGGCTACAAAATCGTCCCCCTC
TCTCCAAGCAGAAGGATGTGTTAAGTGGCGGATCCGTCGCTGTAGAGGGG
AAAAAGGCTGGTCCCGACGGGTCAAGGATATGGGAAGACGACCCTCGGGG
GGCCAGTGGACGATCCCCCTCTACGAGCCAGCAGGAACTTCATCAGAAGC
TGCTCAAGTTCAAACTGGAAAATGATGCGCGCTTCAAAGATGCTGCACTT
TATGCTGCCCTCTCCCACCCAATCGCTTGGGACCTTTCCTCCGACGATGG
CTCTACCGCAAGCTCTATCCAAAGCGATGGAAACGGCCCAAGTCACGCCT
TTCGGTACACTGACAACGCGACGCGCAGGGCTCAACAGGTGCTGCAACAC
AAGCTCAACATGATGTCGCCCACAGATAAACATATGCTTGCCGAGGCTAA
GGCGAATCCAGGCCCCATCAAAAACGTAGCCACTTATCCGGATAGTCCGA
TGCAGAAATTCCAGAATCCGGACAGTCCGATGCAGAAATTCCAGCAGGAC
CTCAACCTTAGTGTGGCGGCAATGTTCGAAGCCGAGGTCCAACCTTTCTC
GGCACTAGAGGAGTTGCCAACAAGCCAGGCCCATGTGACGTGGCAGGAGA
ATAAAGAGACCAGGTCTGTACTTTGCAAAGCGACACACATTGAAGCGGGC
CGAGATGAGGAAAGGAGTCCTCAGCAAGGCCACAAGGATAGAAGCAACAG
ATTGTTTCGCACAATTAGGTCGTCCCATCTTGAGAAGCACGTTTCTTTTT
CGGCTGAGAACGTCGTCATCAACACGAGTGCCTCTCCCTCCCTCCCTTTA
CATAGCTCTCATCTAGAGCAAGCAGCAGAGGAGAGTCGAACTTTCGACGA
GGCCAGAATGCGCACCTCGGACGATCAAGGCTTGGATAAGGGTATCGAGG
GCGAGGAGATTGAGATGGAGGAGTCATTCGACTTTAATAACGTGGAAGAG
CAGGACTTCAGCTCGTCCAAGAAAAATTTGAAAGGCGACATAGCTGAAGA
ATGTGCAGGAATTGTGATTGAAGATCGAGACTTGTTCGAGTATGCGAATA
GAAGGAAACCATCGAACGAGGAAAAGTTGAAATTGGTGAAGGGCAAGGTG
CAAGCTGCGTGTGTATTCCTCTTTATCTGTATGACGATGATTTGCTTCCT
GACCTTGGTCCTGGGTTTGGTCAAGAATGTCTACAAGCACACGGGAAGTT
CTGTACAGGCGCGCCATAAAAAGCCTTCGATCACACAGGTCTCTTTCGTA
CCTTGCAGTAGCGGCACAAATCTGCCGGTGAACAACAGTCCCACAAATAG
GGAGACAGGGACCGAGAAGGAGGCGCCGGCTACACAGACGAGGCCGGCAC
CATTAACGATATTGGACCCTATTGCTTGTGCCCATCAGGAGATCATCCGG
GTAGCTCGACAGCAGGTCAAACAACATAGGGGTTCCGTTTTATCCAACGA
GGAACTTCGAGACCAGTTAGCGCCGCGGAATGGCCTACAGCCTGTTCAGA
AGAAGTGCGTCCGTAGTTTTATGTACGAGGCCCTGCAGCGCCTCTTCAAC
TTCCGGATTGTCGGAGTATTGCTATGCTATTCCCTTATCTATGTTCTTCT
TGTCTAGATCAAGATGGCTATTTGACAGGTGTGGAAGGACATGAGTTTCC
TGAGCCAGTAAAATGAGAAGGAACGTTGGTTCTTAAGGACGGGTATTACA
AAGCGAGAAGAAATACATCAATCAGTTGCACCAC back to topprotein sequence of rna2963 >rna2963-protein ID=rna2963-protein|Name=rna2963|organism=Nannochloropsis gaditana|type=polypeptide|length=502bp
MSSANLVDINNLQLKLYIGGKFVEAPLRLPVVDPATEEVIVHAPAASESH
INQAVEAARAVFPYWSTLDGASRAKHLDAIAEAVKRLKPQLAELESRDSG
KPLAEAMWDMDDVSGTFTYYAGLARELDGKQYEAVTDLPPGGDFTASLRY
EAVGVVAAIVPWNYPLLMATWKLAPALAAGCSIVLKPSEVTPLTALQFAL
IVEEVGLPAGVINILTGGPETGAILSNHQDVDKITFTGSVPTGVKIMTAA
AKGIKNVTLELGGKSPAIVFDSCDLARTVEWVMFGCFWTNGQICSATSRL
LVQETIYDKFMAKLVDETNKIQVGNPLAEGVKMGPIVNKVQFDKVMGFLE
RARVEGINFAAGGDRPTDCPRGYYVRPTVLTGMRPTAEVWSTEIFGPVLS
VMAFSTEDEAIRMANDTEYGLAGAVFSGVEAQLKRVTEQLRCGCVWRNCS
QPCFSQLPWGGWKRSGIGRDLGREGFKAYLETKQIVTHVTENALGWYNVA
KL back to topmRNA from alignment at CM002460.1:367258..369370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2963 ID=rna2963|Name=rna2963|organism=Nannochloropsis gaditana|type=mRNA|length=2113bp|location=Sequence derived from alignment at CM002460.1:367258..369370- (Nannochloropsis gaditana)
CGAATTCTCGTGTCATGGATTCTAAAGAGAAACCATAAATTTACGTCACA
ACAACTTCATCCGGTGGGATCATGTGCTCTTGTCTCCATCCGGGACGACT
CGTGTTGTCATACCAAAAAATATCCTCTTACCAGCCAAATAATCTTTGCT
CTTTGCTGACCTCAACAGTCGCTGTGCCAACTACCAGTACGCCCGAAAAA
TATGTCCTCCGCCAATCTCGTGGACATCAACAACCTGCAGCTCAAGCTTT
ACATTGGTGGAAAATTTGTTGAGGCGCCCTTACGGCTGCCTGTTGTTGAT
CCCGCCACGGAGGAAGTCATCGTGCACGCTCCTGCTGGTAAGTCCAACGT
TGGGCTGGGATCGGAGATTGATACATTTTAAAATGATTACCCATGAATGG
CGCGCTACCGGTAATCTGAGGGGCAAGTGTACAGTGTTTCGTGGAGACTC
CGGTGTACTGGGACGGATTTCACTGATGTCATCTGTTTGCGAAACAAACT
GTCAAACTAGCTTCTGAGTCGCATATCAATCAAGCCGTCGAAGCCGCTCG
CGCCGTCTTTCCTTACTGGTCCACCCTTGACGGAGCTTCGCGTGCCAAAC
ATCTTGATGCTATTGCCGAGGCCGTCAAGCGCCTGAAACCTCAACTGGCA
GAGCTTGAATCTCGAGACAGCGGGAAACCTCTTGCCGAGGCAATGTGGGA
TATGGACGACGTAAGCGGCACCTTCACGTACTACGCTGGTTTGGCTCGAG
AGCTGGACGGGAAGCAGTATGAAGCGGTCACGGATTTGCCGCCCGGAGGG
GACTTCACTGCCTCGTTGCGCTATGAGGCCGTGGGTGTGGTCGCAGCGAT
CGTCCCGTGGAACTACCCCTTGCTCATGGCGACCTGGAAACTGGCGCCGG
CCCTGGCGGCAGGCTGCAGCATTGTACTGAAGCCCTCAGAGGTGACGCCT
CTGACTGCTTTGCAGTTCGCGCTGATCGTCGAGGAAGTGGGCCTGCCTGC
GGGCGTCATCAACATCTTAACGGGGGGGCCCGAGACTGGAGCCATCCTCT
CGAACCACCAGGATGTGGATAAGATCACGTTCACAGGCTCGGTTCCCACG
GGCGTTAAAATTATGACGGCAGGTAAGAGGACGGTGGATTGTGAGCCTCA
GGATGAACGCAGGATGCATTTCTGATTCCTTCTCCCTCGCTCCAACACAG
CTGCGAAAGGTATCAAGAATGTTACCTTAGAGCTAGGTGGGAAAAGCCCT
GCCATCGTGTTCGACTCCTGCGACCTCGCGCGGACCGTGGAGTGGGTCAT
GTTTGGGTGTTTCTGGACCAATGGGCAGATCTGCTCGGCCACCTCGCGTT
TGCTGGTGCAGGAGACCATCTACGACAAGTTCATGGCCAAGCTGGTGGAC
GAGACCAACAAGATTCAGGTGGGAAATCCTCTGGCAGAAGGAGTCAAAAT
GGGCCCGATCGTTAACAAGGTTCAGTTCGACAAGGTGATGGGATTTTTAG
AGAGGGCGCGAGTGGAAGGCATCAATTTCGCCGCGGGAGGCGATCGCCCC
ACGGACTGTCCCCGAGGCTACTACGTACGCCCGACCGTCCTGACAGGCAT
GCGGCCGACGGCTGAGGTGTGGAGCACTGAGATCTTCGGACCTGTGCTCT
CGGTCATGGCCTTCAGTACCGAGGATGAAGCTATTCGCATGGCGAATGAT
ACGGAGTATGGCCTTGCCGGCGCGGTATTCTCAGGAGTGGAGGCTCAGCT
GAAGCGTGTGACAGAGCAACTTCGTTGTGGCTGTGTTTGGCGCAATTGCA
GCCAGCCTTGCTTCTCGCAGTTGCCGTGGGGCGGATGGAAGCGTAGTGGG
ATTGGGAGGGATTTGGGGCGAGAAGGCTTTAAGGCGTACTTAGAGACCAA
ACAAATCGTCACTCACGTCACAGAAAATGCTTTGGGATGGTACAACGTTG
CCAAGCTTTGATGAATGGATTGAGCTGCCTTGTGCAATATTCACCGCGGT
CGAAAAGCGCGAACAGAAGACTCGCACTACCCTCTTAGTAAGGCATTTAA
AAGCGCGTGTGTCATGAGCTGGTTTGAGGAAAATTTTAAAATGAAATCTG
AAAATGGAGAGGT back to topCoding sequence (CDS) from alignment at CM002460.1:367258..369370- >rna2963 ID=rna2963|Name=rna2963|organism=Nannochloropsis gaditana|type=CDS|length=4527bp|location=Sequence derived from alignment at CM002460.1:367258..369370- (Nannochloropsis gaditana)
CTGCGAAAGGTATCAAGAATGTTACCTTAGAGCTAGGTGGGAAAAGCCCT
GCCATCGTGTTCGACTCCTGCGACCTCGCGCGGACCGTGGAGTGGGTCAT
GTTTGGGTGTTTCTGGACCAATGGGCAGATCTGCTCGGCCACCTCGCGTT
TGCTGGTGCAGGAGACCATCTACGACAAGTTCATGGCCAAGCTGGTGGAC
GAGACCAACAAGATTCAGGTGGGAAATCCTCTGGCAGAAGGAGTCAAAAT
GGGCCCGATCGTTAACAAGGTTCAGTTCGACAAGGTGATGGGATTTTTAG
AGAGGGCGCGAGTGGAAGGCATCAATTTCGCCGCGGGAGGCGATCGCCCC
ACGGACTGTCCCCGAGGCTACTACGTACGCCCGACCGTCCTGACAGGCAT
GCGGCCGACGGCTGAGGTGTGGAGCACTGAGATCTTCGGACCTGTGCTCT
CGGTCATGGCCTTCAGTACCGAGGATGAAGCTATTCGCATGGCGAATGAT
ACGGAGTATGGCCTTGCCGGCGCGGTATTCTCAGGAGTGGAGGCTCAGCT
GAAGCGTGTGACAGAGCAACTTCGTTGTGGCTGTGTTTGGCGCAATTGCA
GCCAGCCTTGCTTCTCGCAGTTGCCGTGGGGCGGATGGAAGCGTAGTGGG
ATTGGGAGGGATTTGGGGCGAGAAGGCTTTAAGGCGTACTTAGAGACCAA
ACAAATCGTCACTCACGTCACAGAAAATGCTTTGGGATGGTACAACGTTG
CCAAGCTTTGACTTCTGAGTCGCATATCAATCAAGCCGTCGAAGCCGCTC
GCGCCGTCTTTCCTTACTGGTCCACCCTTGACGGAGCTTCGCGTGCCAAA
CATCTTGATGCTATTGCCGAGGCCGTCAAGCGCCTGAAACCTCAACTGGC
AGAGCTTGAATCTCGAGACAGCGGGAAACCTCTTGCCGAGGCAATGTGGG
ATATGGACGACGTAAGCGGCACCTTCACGTACTACGCTGGTTTGGCTCGA
GAGCTGGACGGGAAGCAGTATGAAGCGGTCACGGATTTGCCGCCCGGAGG
GGACTTCACTGCCTCGTTGCGCTATGAGGCCGTGGGTGTGGTCGCAGCGA
TCGTCCCGTGGAACTACCCCTTGCTCATGGCGACCTGGAAACTGGCGCCG
GCCCTGGCGGCAGGCTGCAGCATTGTACTGAAGCCCTCAGAGGTGACGCC
TCTGACTGCTTTGCAGTTCGCGCTGATCGTCGAGGAAGTGGGCCTGCCTG
CGGGCGTCATCAACATCTTAACGGGGGGGCCCGAGACTGGAGCCATCCTC
TCGAACCACCAGGATGTGGATAAGATCACGTTCACAGGCTCGGTTCCCAC
GGGCGTTAAAATTATGACGGCAGATGTCCTCCGCCAATCTCGTGGACATC
AACAACCTGCAGCTCAAGCTTTACATTGGTGGAAAATTTGTTGAGGCGCC
CTTACGGCTGCCTGTTGTTGATCCCGCCACGGAGGAAGTCATCGTGCACG
CTCCTGCTGCTGCGAAAGGTATCAAGAATGTTACCTTAGAGCTAGGTGGG
AAAAGCCCTGCCATCGTGTTCGACTCCTGCGACCTCGCGCGGACCGTGGA
GTGGGTCATGTTTGGGTGTTTCTGGACCAATGGGCAGATCTGCTCGGCCA
CCTCGCGTTTGCTGGTGCAGGAGACCATCTACGACAAGTTCATGGCCAAG
CTGGTGGACGAGACCAACAAGATTCAGGTGGGAAATCCTCTGGCAGAAGG
AGTCAAAATGGGCCCGATCGTTAACAAGGTTCAGTTCGACAAGGTGATGG
GATTTTTAGAGAGGGCGCGAGTGGAAGGCATCAATTTCGCCGCGGGAGGC
GATCGCCCCACGGACTGTCCCCGAGGCTACTACGTACGCCCGACCGTCCT
GACAGGCATGCGGCCGACGGCTGAGGTGTGGAGCACTGAGATCTTCGGAC
CTGTGCTCTCGGTCATGGCCTTCAGTACCGAGGATGAAGCTATTCGCATG
GCGAATGATACGGAGTATGGCCTTGCCGGCGCGGTATTCTCAGGAGTGGA
GGCTCAGCTGAAGCGTGTGACAGAGCAACTTCGTTGTGGCTGTGTTTGGC
GCAATTGCAGCCAGCCTTGCTTCTCGCAGTTGCCGTGGGGCGGATGGAAG
CGTAGTGGGATTGGGAGGGATTTGGGGCGAGAAGGCTTTAAGGCGTACTT
AGAGACCAAACAAATCGTCACTCACGTCACAGAAAATGCTTTGGGATGGT
ACAACGTTGCCAAGCTTTGACTTCTGAGTCGCATATCAATCAAGCCGTCG
AAGCCGCTCGCGCCGTCTTTCCTTACTGGTCCACCCTTGACGGAGCTTCG
CGTGCCAAACATCTTGATGCTATTGCCGAGGCCGTCAAGCGCCTGAAACC
TCAACTGGCAGAGCTTGAATCTCGAGACAGCGGGAAACCTCTTGCCGAGG
CAATGTGGGATATGGACGACGTAAGCGGCACCTTCACGTACTACGCTGGT
TTGGCTCGAGAGCTGGACGGGAAGCAGTATGAAGCGGTCACGGATTTGCC
GCCCGGAGGGGACTTCACTGCCTCGTTGCGCTATGAGGCCGTGGGTGTGG
TCGCAGCGATCGTCCCGTGGAACTACCCCTTGCTCATGGCGACCTGGAAA
CTGGCGCCGGCCCTGGCGGCAGGCTGCAGCATTGTACTGAAGCCCTCAGA
GGTGACGCCTCTGACTGCTTTGCAGTTCGCGCTGATCGTCGAGGAAGTGG
GCCTGCCTGCGGGCGTCATCAACATCTTAACGGGGGGGCCCGAGACTGGA
GCCATCCTCTCGAACCACCAGGATGTGGATAAGATCACGTTCACAGGCTC
GGTTCCCACGGGCGTTAAAATTATGACGGCAGATGTCCTCCGCCAATCTC
GTGGACATCAACAACCTGCAGCTCAAGCTTTACATTGGTGGAAAATTTGT
TGAGGCGCCCTTACGGCTGCCTGTTGTTGATCCCGCCACGGAGGAAGTCA
TCGTGCACGCTCCTGCTGCTGCGAAAGGTATCAAGAATGTTACCTTAGAG
CTAGGTGGGAAAAGCCCTGCCATCGTGTTCGACTCCTGCGACCTCGCGCG
GACCGTGGAGTGGGTCATGTTTGGGTGTTTCTGGACCAATGGGCAGATCT
GCTCGGCCACCTCGCGTTTGCTGGTGCAGGAGACCATCTACGACAAGTTC
ATGGCCAAGCTGGTGGACGAGACCAACAAGATTCAGGTGGGAAATCCTCT
GGCAGAAGGAGTCAAAATGGGCCCGATCGTTAACAAGGTTCAGTTCGACA
AGGTGATGGGATTTTTAGAGAGGGCGCGAGTGGAAGGCATCAATTTCGCC
GCGGGAGGCGATCGCCCCACGGACTGTCCCCGAGGCTACTACGTACGCCC
GACCGTCCTGACAGGCATGCGGCCGACGGCTGAGGTGTGGAGCACTGAGA
TCTTCGGACCTGTGCTCTCGGTCATGGCCTTCAGTACCGAGGATGAAGCT
ATTCGCATGGCGAATGATACGGAGTATGGCCTTGCCGGCGCGGTATTCTC
AGGAGTGGAGGCTCAGCTGAAGCGTGTGACAGAGCAACTTCGTTGTGGCT
GTGTTTGGCGCAATTGCAGCCAGCCTTGCTTCTCGCAGTTGCCGTGGGGC
GGATGGAAGCGTAGTGGGATTGGGAGGGATTTGGGGCGAGAAGGCTTTAA
GGCGTACTTAGAGACCAAACAAATCGTCACTCACGTCACAGAAAATGCTT
TGGGATGGTACAACGTTGCCAAGCTTTGACTTCTGAGTCGCATATCAATC
AAGCCGTCGAAGCCGCTCGCGCCGTCTTTCCTTACTGGTCCACCCTTGAC
GGAGCTTCGCGTGCCAAACATCTTGATGCTATTGCCGAGGCCGTCAAGCG
CCTGAAACCTCAACTGGCAGAGCTTGAATCTCGAGACAGCGGGAAACCTC
TTGCCGAGGCAATGTGGGATATGGACGACGTAAGCGGCACCTTCACGTAC
TACGCTGGTTTGGCTCGAGAGCTGGACGGGAAGCAGTATGAAGCGGTCAC
GGATTTGCCGCCCGGAGGGGACTTCACTGCCTCGTTGCGCTATGAGGCCG
TGGGTGTGGTCGCAGCGATCGTCCCGTGGAACTACCCCTTGCTCATGGCG
ACCTGGAAACTGGCGCCGGCCCTGGCGGCAGGCTGCAGCATTGTACTGAA
GCCCTCAGAGGTGACGCCTCTGACTGCTTTGCAGTTCGCGCTGATCGTCG
AGGAAGTGGGCCTGCCTGCGGGCGTCATCAACATCTTAACGGGGGGGCCC
GAGACTGGAGCCATCCTCTCGAACCACCAGGATGTGGATAAGATCACGTT
CACAGGCTCGGTTCCCACGGGCGTTAAAATTATGACGGCAGATGTCCTCC
GCCAATCTCGTGGACATCAACAACCTGCAGCTCAAGCTTTACATTGGTGG
AAAATTTGTTGAGGCGCCCTTACGGCTGCCTGTTGTTGATCCCGCCACGG
AGGAAGTCATCGTGCACGCTCCTGCTG back to top
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