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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100034g36.6302.mrna |
| Orig protein id | gnl|cribi|Naga_100034g36.6302 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:326081..328228 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2945 ID=rna2945|Name=rna2945|organism=Nannochloropsis gaditana|type=mRNA|length=4143bp
ATGTATCTCTTCTTATGTCTCGAATTTATTACAGGCAAAACGGGGCACCT
GAGGGGCACGGGCCCTGATGCTCGCTTCGACGGCCTCGGGAGAGGAACTA
AGATTGAGGCAATGCGGGGCCAGGACAAGATAAATTTACCATTTATTACG
CTCACGGCAGTTACACTGATGCCTGACTTAGCAGTCAGGCTATCGAAGAT
ACTGCGGTTACTGTGGCAGGCTTTACCCTTGTGCTTGCTCTTGTGCGTAG
CAACTTGGAGATGCTTGGGCGTTGTGGCATTTGTATTGCCTTCTGCTACG
AAGGACATCGATCATCGCCTTGCATATGAGTTATGTAGCACCTCCAAGCG
CTTCAATTGGGCTCTTTGCACATTGAAAACGTGGAGCCCGGGTTATATCC
AAGATGACGATAATGGACCACCGTCTCCCTCGAAAAGGGGGAGAAAAGGT
TGTCGGAATCCTACACCTTCTCATTCTAACACTCGAGTCATGGCAGACCT
TCAAGACCGTGGAATATCCAAGAATACATATGGGAAAGCAATCGATGTTG
GAATCGGTAAAAAAGATTGGGTCAAATCGTTCGAGCACCTTCAGGGTTTG
ACTGTCCGACTCTCATCGGACTACGAGGCTGCTTTTTCCACTTGCCACGC
TGCTCAGCGTCCTTTTGAGTGTCTAAGCTTGTTGAGGTACATGATTAAAG
ACGGCCTTCCCCGCAGACCGCAATGGTACGCGAGTACGGCACAGTTGTCC
ATCCACTTGAGGAACTGGATTACGGCCTTGGATACGTATATGCTCTTTGA
GCGGAAAGAGGAGTTTGAGCCTTCATGTACATCGACGCGCAACTTACTGA
TAACTGCATTGCAAGCGTCGAGCGAGCTCGGGAAAGGAAACCGGGCAGTG
AGAGTGTTCGAGAAAGCCACACAAACGATGGTGCCTCCGCTGGCTACTAA
ACCCGCCGCTGTTTTCGTTCTCCGAGCGTGCTTTCGCGCAGCGGCGTATG
ACATTGGGCTTCCATTTGCGCGCCTTATACTGACCGACTCTCCTATCCGC
ACTACGCAAAACTCCACGGACTTCGGAACATTCGTGCTCGACATAGCGAC
CGTAAATACTGCCATCTCTCTTCTCGCAAAGGCCAATTGCGTTGATGAGG
CGTTGGCCGCCGTTGAACGCACCAGCACCTGCTGGGGTTTGACTCCAGAC
GTTTACACCTATGGTGCAGTGATTGAGGGGCTCGCAGCTCCCGGCGGGAA
CCTAGATGAAGCCCTGGCCCTTGTTCGATACATGGTTGCCACCCAGAGCA
TTGCGCCCAACGTGGTGATCTGCAATATTCTGGTGCAAGCATGCTGCCGG
GCTGGTCGATTGCAGGAAGCCTGGGACCTGTTTCAAGCCATTCCAACATT
AGAGAGGAGTGTACATCGAACTCAACCTTTGTGGTCGCTCGCCACGCGAG
AAGGCGATGTCGTCGTCGTGGAGGGGCTTTTGGAAGAACTTGCACGAGCT
AGGGACGCGCAGCTTAATCAGCAATCCCACACAAAATCTCGTACTTTGCC
TGCCGCAAAAGATTTCCTCAGCAAATCATGCTACCACACCTCATTGTGCA
ATCTCGCCAGGCTGGGACTGAGCGATCACGCAGAACGCCTGGCCGGCCTA
TGTAAGCCTGTAGACGGGAAGCCCCTGACACCCATGACATTTTACGCATT
GGTCGCAGCATGCGAGAAATCAGGTCACCATGAGCGTGTTCTACATTGGT
TTCAGGAGATGTTGTGCGCGAAAGTCGAGCCAGACCCCCTGCGGTATGGT
ATGGCTCTCAAAGCATGTGAGGTACTCGGCCGTTGGCAGTCCGGGCTGGC
TTTGATGTTGAGAATGCGGGACAGTGGGCAAACGATGGACCCCTTACTGT
GGAAGCGCCTTTTTTTGCTACTTGGTCGTGAGGCTCGTGGCAAAGAAGCG
TTGGATTTGGTGCAAGACATGGAAAGCAGAGGCTCGAAGCTGGAGCCGAT
ATGTTACGAGGCCACCGTCACCGCTCTTTCGAGGATGGGCGATAAGATGC
AATCCGTGCGAAAGCTTATGCTGTATGAGGAGGAGAGACACATGCCAATG
GGTCGAGGAGCTTACACATCGGCAATCGCGGCATGCAGGGACACGAAAGA
TGCCGAGTTGGCTTTGAAACTGTATCAACGCATGAAGGGCAGGGGGAATG
AGGCCCCATCCACGGTGACGCGCGCTGCTCTACTGGATGTGTTGGTCGCA
GCTGGAGGAGCGAACTTCCTTCAGTGGGCGGGAGAGGTCGCTTCCGAGCA
AGAAGCGAGTGGAGAGGTGGTCCCGACGCACATGTTGGGCAACATGGTCC
TGGCTTCAATCGCGCGATCTACCGACGTTTCCGATGAAGCAGGTTTCAAG
AAAGCTTTGGAGTATTTCCGATCTTTATGGGGATCTCGCCAAGATCCTGC
ACTACCCTTACCATGGACACTTTGCAACGCGGCTCTGCGGGCTTGTGCGC
GCCTGGGAGAGTCTCAACTGGCATTGGAAGTGCTTTACACCATGCGGACT
ACGAAAGCTCCTGTTGATGTGGTTATGTTTGGCTGTGTGTTAACATCATG
TGCTGTGGCTGGGGAGTGGAAGGAAGCTTTTTTGTTGCTGAAAGATATGG
AGCGCACCGCTAAAGCTGCAGAGATGGCGGGCTTGGACTTGAGTGACATC
GTCCGGCCAAATCTTGTCTGCTACACTTCCGTCATAACCGCACTCCAGCA
GGGACAACAGTGGCAGAAAGCCTTGCACCTGCTTGTGTACATGCTTAGCT
CGGGTCCAGTTCCTGACGTTCAAGTATTCAATGCAGTTATGAGTGCTTGT
GCCAACGCCGGAGAGACTCACATGGCGCTGAAAGTTTTCCAGGCTATGCA
AGCAAATGGTGTAGCGCCTGATGCCGTGACATATGCGACGGCAATCGTTG
CATGCTGGCGGGGGAATGAGTGGCGCCGGGCGTTAGAGATTCTGCAGCGC
ATGAAGGCGGACGGTTTTTCCCCCAATATGATAACAGTGACCCTGGTTAT
CGACGCCCTCGACAAAAGTCGCAAATTTGATCTGGCCGTCCATGTGTTCG
AATCCAGTGTAGTAGGGTATATTCGCTCGGAAGACTACGAAATGGAATCT
GATGGGCCTGGCATGCTTGTAGATTTGCATGGATATTCACAACCAGTAGC
GCGAGCTGCGGTCAGGGCAGGGCTAAAGCGATTGTGTCAAATGTATGAAC
AGACGGGCAAGCGCGAGGGAGTCATTAAAGATTTCGTCTTCATAACTGGC
GTAGGGCGCAATAGCGAGATGCCTTTTGAGCCAGTCCTTCGTCCAGCTAT
GCAGCGGATGTTAAATGAAGATTTCGATCCGCCATTGCCATGTGAAACTG
CAGAGAATAATCCCGGGCGTTTGATTGTGCGAGCTCATGACCTAGTTGAA
TGGTTGAGTGCGCAGTCTCGGAAGAATCTTTTGTCGCCAGCAGAGATGTC
AGGAATATTGAAACTACGAAGCGCTGAACAGCTGGATGATACTTTTCACG
ACTTCAAAAAAAGCCGTCAGGAGGTGCGCGGCTCGTCATGAATGAGGCCG
GCCCAGCGCAGTAGGCGACAGCGAAAGCTCTATCGCTGTAAATATTCTGT
AATTTTATTTTGTCCGCCTTTGTCTCAAATTGCAAGAATCAAAAGATCTT
GAGCAAGGTTGAGTGGCGGATGGCTTTCCTCAACGTCCTTTATTTACCTT
TTGCATCATTTGATTAAAATCTGTTACGCACGCGGGTGGCACCATCTTCA
ACCTATTTAGGTTAAAGCACGTACAGTCATATCTCTATCGATTTCTACCT
GCACAGCCTCATCCCTCGTACTTTTTGTCTCTTGTTGAAAGTGTTTTCCT
GGGTGATGACTGAGTGCTGCCGTGGCCAGCGCATGCTGCTCAAAGATGCA
CACGTGGCCTCGTTTTTGCTCTCCACACCGACTGCAGCGGTAGCTCGGAC
GATGTGAAGGGCGTTTTTTAATGGAAACACAATGCAGCATGGTTATTATT
TACGAAATACTGAGCGCTTAAGTGCCGTTTGACTCGCATTCCCGTGTAGC
GTGCTACCAGATGGAAAGTTATAGAAGCGAGTTATACAAATGT back to topprotein sequence of rna2945 >rna2945-protein ID=rna2945-protein|Name=rna2945|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
MELFATSAMYGHPPHDLSPFQIKGVTLSPPRIFGGGRLKNFFVFSFPIEK
SSSKVVGRGVNLPSLLPPCQDKEKQVEENLDKDVQGVRCDQTSGMDQVTS
LKRHETTRAGGSQRNKSIKTWPCVGKWPEMLPI back to topmRNA from alignment at CM002460.1:326081..328228+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2945 ID=rna2945|Name=rna2945|organism=Nannochloropsis gaditana|type=mRNA|length=2148bp|location=Sequence derived from alignment at CM002460.1:326081..328228+ (Nannochloropsis gaditana)
GGCATGGAGCTTTTCGCCACTTCTGCAATGTACGGCCATCCTCCCCATga
tctctctccttttcaaATCAAAGGTGTGACACTTTCACCACCAAGAATAT
TTGGTGGCGGCCGACTCAAAAACTTTTTtgtgttttcttttccaatAGAA
AAAAGTAGTAGTAAAGTAGTAGGCCGAGGagttaacctcccctccttact
TCCTCCATGCCAGGATAAAGAAAAACAAGTTGAGGAGAACCTGGATAAGG
ATGTACAGGTACAATTGTACGTTTTTAACGGGTTGTTGGATGATCTCAAC
GCCCATGTTGATGTGGACTTTGAAGGTCCCAGCGTTTCTAACGTTTTTCC
ATCCGGCCCCACCAGAGGGACGTTCTGATGTGTCGTGCGCTCTATAGCct
tgtcttttcctttctttccatatTTCCTCCGCCAATTGCGTCAATGAAGC
TTGAACTAGCGCGAATATCTAATAATGCGTCTACTGCTTCGTTTCCAATT
TACGACAATTCTCACTTTCGCTGTACATTACGGACTAACATCAATCCGTA
TTCCGTTTTTGATAAAGAAATATGGATACCATCTCAGATATTTCCCTCAA
TTTGGTGCATCACTAAGTGTCACACATTATGAAATATGTTTGGAACATTT
CATCAGGGTGTGCGATGTGACCAAACATCGGGCATGGACCAAGTGACAAG
TTTAAAAAGACATGAGACAACTCGTGCGGGTGGCAGCCAACGAAACAAGA
GCATTAAAACATGGCCTTGTGTCGGAAAGTGGCCAGAGATGCTACCGATA
TGAAGTGACATTATCATTTGGTTTAAGCCGCGGAAACGAGAAATTTGCAG
GTTGACCTGACCGTTTCAGATCAGCAAATTAGCCAGACGACGGCAGTGTT
CGAACGCGCAAAAATGAATCGAGCCGTCTACATGTTGTAGGCTATACCAG
ATTTGTTGCGGACGGCGATAGAGGGCTTTAAGATCCGGAGGAAGGCTTAG
GAATTAAGTGtgcgaaggcggggaaggcatTCAAAGGTTAAGGCACAGAT
TGATTCAGTTCAAGGCGAGTGAAGGCGTTTCTTCTTTACTGTAGAGTGCT
GTTTAGGACCTAGTTACCAGAGTTTATCGCTGTACAACTCATTTTTCTTT
GGGTTTTCCTCACACTGATATCCTTCGACGACAGTATCCCTTACAGCCAG
TGACAAGGATGTCAGATTGGCGCCTTCGCACGTCTTCCTACTCAACAAGT
TGGACAGCAGGATCGGCAGGCTCTGTTTGACGCTGGTTCGTCAAAACCTC
GATGTTTCCACCGCCATTTTCCTCAGCTAATTGCGCCAGACTTGCCCCTT
GAGCTTGACGAGCCAACTCTAAGTCaatggtggagaggaggcgctgcTCC
TCGTCGGTGTACTGCTTGACACCAGTTCGAGGCGTGACCTGTATGAGAGC
GTCCCGTCGGATCTATTTTGTGGTTGTCAGGTAAAGGTAAATTAATTTAA
GGTATGTTCCCTGCTGAAAAGAATGGGGTAAAGAATATTTGTTGGCTTGT
ttgtccctttcctcgcaACATTGACAGGATTTCGACGCATCTCTCACCTG
GCTGCCAGCGATTGCGACAGGTTTCGAGATTCCAAAGCCCAAAAGATCAT
TTTCATTGGCGGTGGAAAATTTTCCATCAAGATCCAAAAGCGCGGAAATA
CCCAGGTCGTCAAAAGCACGATTGTCTTTCTCCCAAGTTTCCTTGGTCAA
AGGAAAGAGCAGATTATTGAAAGTCAACTCGAAATTGTAGGGAAACTGCA
GCCCTCGCAATTGAATTCTGGTTTGCAGCGGATGAAGTACGAAAGAAGTG
AGTAGTTTGTAAGCAATCGTCACCCCAAAACCCATCCATCTATCTATGTA
TCCGTCAGTCAGTAAGCTCACTTTTTTGCAGCAACTGGTCCACCTTCTCT
ACCGTAACAAGTGATAAGAAGCGCCGCATTGTCATTCTCAAGCGCATAAT
TGATAACCCCGGGACGTTCGGGTCCTAACGGATAGCCCTCGATCTCGGGC
AGCCGCACAGTGCCCTGATTGTGGGAAACGCAAGCTTGAGACATGAGTAA
TAATACAAACCCCTTCGATGAATCTTGCACAAATCACCTTTGCAATTA back to topCoding sequence (CDS) from alignment at CM002460.1:326081..328228+ >rna2945 ID=rna2945|Name=rna2945|organism=Nannochloropsis gaditana|type=CDS|length=804bp|location=Sequence derived from alignment at CM002460.1:326081..328228+ (Nannochloropsis gaditana)
ATGGAGCTTTTCGCCACTTCTGCAATGTACGGCCATCCTCCCCATgatct
ctctccttttcaaATCAAAGGTGTGACACTTTCACCACCAAGAATATTTG
GTGGCGGCCGACTCAAAAACTTTTTtgtgttttcttttccaatAGAAAAA
AGTAGTAGTAAAGTAGTAGGCCGAGGagttaacctcccctccttactTCC
TCCATGCCAGGATAAAGAAAAACAAGTTGAGGAGAACCTGGATAAGGATG
TACAGGGTGTGCGATGTGACCAAACATCGGGCATGGACCAAGTGACAAGT
TTAAAAAGACATGAGACAACTCGTGCGGGTGGCAGCCAACGAAACAAGAG
CATTAAAACATGGCCTTGTGTCGGAAAGTGGCCAGAGATGCTACCGATAT
GAATGGAGCTTTTCGCCACTTCTGCAATGTACGGCCATCCTCCCCATgat
ctctctccttttcaaATCAAAGGTGTGACACTTTCACCACCAAGAATATT
TGGTGGCGGCCGACTCAAAAACTTTTTtgtgttttcttttccaatAGAAA
AAAGTAGTAGTAAAGTAGTAGGCCGAGGagttaacctcccctccttactT
CCTCCATGCCAGGATAAAGAAAAACAAGTTGAGGAGAACCTGGATAAGGA
TGTACAGGGTGTGCGATGTGACCAAACATCGGGCATGGACCAAGTGACAA
GTTTAAAAAGACATGAGACAACTCGTGCGGGTGGCAGCCAACGAAACAAG
AGCATTAAAACATGGCCTTGTGTCGGAAAGTGGCCAGAGATGCTACCGAT
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