rna2941, rna2941 (mRNA) Nannochloropsis gaditana

Overview
Namerna2941
Unique Namerna2941
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length318
Alignment locationCM002460.1:316783..317058 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100034g40.6307.mrna
Orig protein idgnl|cribi|Naga_100034g40.6307
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:316783..317058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100034g40gene2821Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2941rna2941-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27734.1cds2933Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2941 ID=rna2941|Name=rna2941|organism=Nannochloropsis gaditana|type=mRNA|length=318bp
ATGAGTACTTGCTTTTGTCTCTTTAAAACTCGGAGACGCGAACTCGGCCC
ATTTCTGATGCATGAGAGGCGGCCCAGCAAAACTTGTTCAAATATTTTCT
CTAAGTCTAGCGAAATTCAAGAGCAAAGTCTTGGACGAGCTCGTGGACGA
GCTCTAAGTGACGGGATTTTCCGGGTATTCGGGGGAGGCTTAGACGAAAC
AGATGCTTCCCTTGCAGGAAAGAACAATGTGAAGTTGGTTACATTCTCCT
TGTTCTTCTACAGGAAGACGCCGGTCTCTTCTTCCTTGTTTTATCACTCA
ATGAGCTTTCCTTTATGA
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protein sequence of rna2941

>rna2941-protein ID=rna2941-protein|Name=rna2941|organism=Nannochloropsis gaditana|type=polypeptide|length=72bp
MYYIPNLSHSAGLFRGSWNQHDLAGCDGKGAGNGGMRCCEKNRKDKSLVS
QHIVFESKTANRLLVSREDRFK
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mRNA from alignment at CM002460.1:316783..317058-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2941 ID=rna2941|Name=rna2941|organism=Nannochloropsis gaditana|type=mRNA|length=276bp|location=Sequence derived from alignment at CM002460.1:316783..317058- (Nannochloropsis gaditana)
ATGTATTACATTCCTAATTTAAGTCATTCCGCTGGCTTGTTTCGAGGATC
CTGGAATCAGCACGATCTTGCGGGTTGCGACGGAAAGGGTGCGGGGAATG
GAGGAATGCGGTGTTGCGAGGTAAGAATGACAGAAATGTGACAACAGTCC
CGCCTGTCCTTCTCACTTTCTTCCAAGAAAAATCGAAAAGACAAGAGCCT
AGTTTCACAACATATTGTGTTTGAATCAAAAACGGCTAACCGACTACTCG
TCAGCCGGGAAGACAGATTCAAGTAG
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Coding sequence (CDS) from alignment at CM002460.1:316783..317058-

>rna2941 ID=rna2941|Name=rna2941|organism=Nannochloropsis gaditana|type=CDS|length=438bp|location=Sequence derived from alignment at CM002460.1:316783..317058- (Nannochloropsis gaditana)
AAAAATCGAAAAGACAAGAGCCTAGTTTCACAACATATTGTGTTTGAATC
AAAAACGGCTAACCGACTACTCGTCAGCCGGGAAGACAGATTCAAGTAGA
TGTATTACATTCCTAATTTAAGTCATTCCGCTGGCTTGTTTCGAGGATCC
TGGAATCAGCACGATCTTGCGGGTTGCGACGGAAAGGGTGCGGGGAATGG
AGGAATGCGGTGTTGCGAGAAAAATCGAAAAGACAAGAGCCTAGTTTCAC
AACATATTGTGTTTGAATCAAAAACGGCTAACCGACTACTCGTCAGCCGG
GAAGACAGATTCAAGTAGATGTATTACATTCCTAATTTAAGTCATTCCGC
TGGCTTGTTTCGAGGATCCTGGAATCAGCACGATCTTGCGGGTTGCGACG
GAAAGGGTGCGGGGAATGGAGGAATGCGGTGTTGCGAG
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Synonyms
Publications