|
Properties
Property Name | Value |
Product | JAB1/Mov34/MPN/PAD-1 |
Orig transcript id | gnl|cribi|Naga_100034g48.6285.mrna |
Orig protein id | gnl|cribi|Naga_100034g48.6285 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:303382..307368 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2932 ID=rna2932|Name=rna2932|organism=Nannochloropsis gaditana|type=mRNA|length=1068bp ATGGCACCAGAGACGTCCTCGGAGGCGACGGCCCAAGTCCCGAGGGAGCA GCCGCCCGCCAGGTCCGACACGGCCACGAGCCACAGGCATTCCACATGCC ACGTGCAACAAGCTTGGTGTGCCGGAGACCAAGTAGCTACTGTAGATTCA CACACGACAGTGGAGACGCTGAGTATCAATGGGGATAGTTCCTCTGTGGA AGTAACTTCGCTCATGGAGAGAGTGGACATTTCCCATCGACCTGTACCCA GCCTGGGCAATAAAGCCAGCAGTGAGAAGAATCACTCGTCGAGCTACTTT TTAGACTTGCCTTCTGTCAACCATAAAGCCATTTTTGAGGAGTTACTCGC AAAAATTACTGAGCTGGCTCCTGAAGACAATGTTCCGCCCTACAATGACG AAGACCTGCTGAACCGAGTTCTGGTGGCTCGGAACCTGCAGGTGCCCGAG GCATTCCGCATGTGGATGAATATTGTAGCATGGAGAAAGCACTACCAGCC TCAGATTCTTTCCGAGGAAGAGGCGGCCCCTTATCTGAGTAAGGGCGTGG TGTCCATTTGCGGGCCCGACAAGCAGGGCCGACCATGTATATACGCCCTG AACCGGAACCACATCATCGACGCCGAGAACCACGACTCTAATCTTCGCAC TATAGTGAATCTCTTGGAAAAGACCACAGTCGAGTCAACCAGGACTGCGG ACGGCTTCATCGCTGTGATAATCGACCAGGAGGGCGTCGGGCGCAAGAAT ATGGACACGAATCTTTTCGTGGGAAAGCCCGGTTTGGTTCAGATATTGCA GGAGTACTACCCCGAACGCCTGGGTTCTTGCTATATTCTTCACACTTCTT GGATATTTAGGCTGATGTGGGCGATCATTTCCCCCTTTTTGGACGAGAAG ACTAGAAGAAAGGTCCATGGCCAAATTGAACGCCACAGCACACAGAGATT CAAAGTAGTCGTTGCCCCTTGGAACGCACTAGGGCTAGCCGACAGAAGAT CGCTGCTGGTTCAACCGGAACACCCGGAAATGTCGAGTTTCATTGTTAAA ATAACTAATTTACTGTGA back to topprotein sequence of rna2932 >rna2932-protein ID=rna2932-protein|Name=rna2932|organism=Nannochloropsis gaditana|type=polypeptide|length=1328bp MAVGIEDVEFESERFAYARVTGHPLWPCVVYNKWGDIPPEIKGQAEELFP KPSQIVAYFIEPWSFCLVQKKDVRSVQDVVEEDIIKKCKRPKQRHDLRLA IDCMKSMQFQPEDAFSVPGVSDPPNARSEKNLGQEAGEGPAMPACPGKAT SVAVRKANSTAKRARGHSSADERSMGVEDRMEDRGTARTTSSQSRPAACT PKAKQRTRAPLAQSPTASSRSGPPVAPIASVITPSTIHDAPRTQLRGKER AKSSAGSKRKLPPSGPRPIFTAVKADAIGSPGPMHAVERIGQKPGRKKAC TGPAKVSPLSVPMHPAGGASSPARTVERMEKGFGKLVRTIYPRLSFLCRQ EARHRASMSSSVSKKGADTIGNRTRGPGYGKCVPAASTPLKDLSLEKLMD DGVIEEGMRIILPPHSAGHSGAEENRDSSGNELARSTHDAAEEQTALMIG DGQLLFNEKVYDSVEDVLEVWVGLKLNKREKKGWAQVRVREGAVTRSLAV HVEQKLRDHHEEEARLRAGAQEAISVLAAPSQNKAPEGSHDINQKEEDTA AALVASLAMESPTGRTFSDRIAPDLHSGKASFKIVGQPGVSNVKKGRSIV KQEGNGKAFFVRIQDEAEKEMLPCHPVSLFVQEKNITPMPKVEDNLEAAS SIPRSLGKAPKKPSSTMQQHVTVPNSIRPPCDDNFQENPFVGFWKTADPA VVERAMETYAVWVSEAYPVLQRNDSSFVGVGEDKEAGISAASAENVHGNG CTGGGDEGTERQLRKQSARKSMRVSDRLHEIQAGKLPPHTLLICEEYGLT PEGVGRRTSSHHANIAQPFTVKVHPDVPFLCDVHAHLADSEIIGFLAGKF NAEERCLYIQAPFPCRATARSDDGSTDVEMDPGSEIEVREVIGRHGMAVT GWYHSHPTFQPEPSLIDIENQYNYQMLLRDKTTAVEPFVGLIVGTYDDSY QNPVSLLRYFHVRHIRMGSASNDGVSFPMALDVLHTRKRKGECSKSPDSA LSGSVHDERIDTKGDGADPVTIGLTQGALAAATLVRTKSPQKQQQEETDA ALGMMSLLACALPTLPVPSSRGPGTHDPLNEEGGSRTQQSDMICGKSQQR NREVGKEGNLAPNVYVSSALVTSAGTIPEQQAQKWDGFGCTADGNVCSAR TPCVRPSTSVMKDAPPKPCQKPSTSIFLAVKEKRHRKLPPSSQIWSSFER LFLGSSEPELRNSGQGSQVGLRATLETVRALVQYYSRLDTRVKFDEEWRK GVCKGEKFEFSLRKRVNQLSLGDAFRQEEFLTLLVEYICACWAEGTPKKL PQPEDFSGTRSERRAAAAAATSALLQET back to topmRNA from alignment at CM002460.1:303382..307368+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2932 ID=rna2932|Name=rna2932|organism=Nannochloropsis gaditana|type=mRNA|length=3987bp|location=Sequence derived from alignment at CM002460.1:303382..307368+ (Nannochloropsis gaditana) ATGGCTGTGGGAATTGAAGACGTTGAGTTTGAGAGTGAGCGCTTTGCCTA
CGCGCGGGTCACTGGCCATCCTCTTTGGCCCTGTGTCGTCTACAACAAGT
GGGGGGACATTCCGCCCGAAATAAAAGGCCAAGCTGAAGAGCTCTTTCCG
AAGCCCAGCCAGATTGTTGCATATTTCATCGAACCCTGGTCGTTCTGCTT
GGTCCAGAAAAAAGACGTTCGTTCCGTCCAAGACGtcgtcgaggaggaca
tcaTCAAGAAATGCAAGAGGCCCAAGCAACGACACGACCTGCGTTTAGCG
ATCGACTGCATGAAAAGTATGCAGTTTCAGCCTGAGGATGCGTTTAGTGT
CCCAGGCGTTTCGGATCCGCCCAATGCAAGAAGTGAAAAAAATTTGGgac
aggaggcgggggagggtccCGCGATGCCTGCGTGCCCGGGGAAGGCCACA
AGTGTCGCGGTCAGGAAAGCAAATTCGACTGCCAAACGTGCACGTGGTCA
CTCAAGCGCCGATGAGAGGAGTATGGGAGTCGAAGATAGGATGGAAGATC
GGGGGACAGCTCGCACGACTTCATCGCAGTCGCGCCCGGCCGCGTGCACA
CCGAAGGCGAAGCAGCGGACACGGGCACCCCTGGCACAATCTCCGACTGC
ATCCTCGCGATCTGGGCCACCGGTCGCGCCTATAGCGAGCGTCATCACTC
CCTCGACTATTCATGATGCACCCCGAACGCAGCTcaggggcaaggaaagg
gcTAAAAGCAGCGCTGGCAGCAAACGCAAACTCCCCCCGTCCGGCCCTCG
CCCCATTTTCACCGCCGTTAAAGCTGACGCGATCGGGTCGCCAGGCCCAA
TGCATGCCGTGGAGAGAATAGGACAGAAgccggggagaaagaaagcgtgC
ACAGGGCCTGCTAAAGTATCACCACTGTCTGTTCCCATGCACCCTGCTGG
CGGCGCCTCGTCCCCTGCGCGGACGGTCGAGCGAATGGAGAAGGGCTTTG
GAAAGCTTGTGCGAACGATTTATCCCCGGCTCAGCTTCCTCTGCAGACAA
GAGGCTCGTCACCGAGCCTCCATGTCGTCTTCGGTGTCCAAGAAGGGGGC
GGATACGATTGGAAACAGGACCCGTGGTCCGGGCTACGGAAAGTGCGTAC
CCGCTGCCTCGACACCTTTGAAGGACTTGAGTCTCGAAAAACTGATGGAT
GACGGGGTCATTGAAGAAGGTATGCGTATAATCCTTCCCCCACACTCGGC
CGGGCATTCCGGCGCAGAGGAAAACAGAGATAGCTCAGGCAATGAGCTCG
CACGGAGTACCCACGATGCGGCGGAAGAACAAACAGCCTTGATGATCGGC
GACGGTCAGTTGCTCTTCAACGAGAAAGTCTATGACAGCGTGGAGGATGT
CCTGGAGGTGTGGGTGGGGCTAAAGCTGAataaaagagaaaagaagggct
gGGCGCAAGTTCGAGTGCGAGAGGGTGCGGTGACACGCAGCTTGGCAGTA
CACGTGGAGCAGAAGCTTCGGGATCatcacgaggaggaggcgcggttGCG
GGCTGGGGCTCAGGAGGCGATATCTGTACTAGCGGCACCTTCCCAGAATA
AAGCGCCTGAGGGAAGCCACGACATCAAccaaaaggaggaggatactGCG
GCAGCCCTTGTCGCATCGTTGGCGATGGAGTCACCGACAGGGAGAACTTT
CTCAGACAGGATAGCACCAGACCTTCACAGTGGTAAAGCATCCTTCAAAA
TTGTGGGACAACCAGGCGTTTCCAACGTCAAGAAAGGACGTAGTATTGTC
AAGCAAGAGGGTAACGGGAAGGCATTTTTCGTGAGGATACAagacgaggc
agagaaagagatgcTTCCGTGTCATCCGGTCAGCCTTTTCGTccaggaaa
aaaatatcaCTCCTATGCCGAAAGTGGAAGACAATTTAGAGGCGGCATCA
AGCATTCCAAGGTCTCTAGGAAAGGCACCCAAAAAGCCTAGCTCTACGAT
GCAGCAACATGTAACGGTACCAAATTCAATACGACCGCCATGCGACGACA
ATTTCCAAGAGAACCCATTTGTTGGCTTTTGGAAGACGGCAGACCCCGCC
GTGGTGGAGCGGGCGATGGAAACGTACGCCGTATGGGTGTCTGAGGCATA
TCCTGTGCTGCAGCGGAATGACTCGAGCTTCGTCGGCGTGggcgaagaca
aggaggcTGGTATTTCGGCAGCTAGTGCAGAAAACGTGCATGGAAACGGC
TGTACCGGTGGTGGCGACGAGGGGACAGAGCGTCAGCTGAGAAAACAGAG
TGCGCGCAAGTCAATGCGTGTGAGTGACCGACTGCACGAGATCCAGGCTG
GAAAATTACCGCCGCACACCCTTCTGATATGCGAAGAATACGGCTTGACg
ccggagggcgtgggaaggcggACTTCCAGCCACCATGCAAACATCGCACA
GCCGTTCACAGTAAAGGTCCATCCTGACGTTCCATTCCTTTGCGACGTGC
ACGCGCACCTCGCAGACTCGGAGATAATTGGCTTTTTAGCCGGAAAATTC
AACGCCGAGGAACGGTGTTTGTACATTcaggcccccttcccctgtcgGGC
GACTGCACGGAGTGATGACGGCTCAACGGACGTAGAAATGGATCCTGGAA
GCGAGATCGAAGTGCGGGAAGTGATAGGCCGGCATGGGATGGCAGTAACG
GGCTGGTATCACTCGCACCCTACCTTTCAACCCGAGCCCTCCCTGATTGA
CATCGAGAATCAGTATAACTATCAAATGTTGCTGCGGGATAAGACAACGG
CCGTGGAGCCCTTTGTCGGCCTCATAGTAGGGACGTATGATGATTCGTAT
CAAAACCCTGTTTCTCTCTTGCGCTATTTCCATGTTCGACACATTCGAAT
GGGTTCGGCCTCAAATGACGGCGTCAGTTTTCCGATGGCTTTGGATGTTT
TGCACACGCGCAAACGGAAAGGCGAGTGCTCAAAAAGTCCGGATTCTGCA
TTGTCGGGTTCCGTCCACGACGAGCGCATTGACACCAAGGGAGATGGTGC
GGATCCTGTCACAATTGGCTTGACGCAAGGAGCGCTCGCAGCTGCAACAT
TGGTCCGAACCAAGAGCCCtcagaagcagcagcaggaagaaACAGATGCA
GCGCTTGGAATGATGAGCCTCTTGGCCTGTGCTCTTCCCACGTTGcccgt
tccttcctcccgcggACCTGGTACCCATGACCCATTGAATGAAGAGGGGG
GATCCAGGACTCAGCAAAGCGATATGATATGTGGAAAAAGCCAACAACGC
AACCGAGaagtggggaaggagggaaatttGGCACCGAATGTTTACGTCTC
ATCAGCTCTGGTGACTTCCGCTGGCACGATACCTGAACAACAGGCACAGA
AATGGGACGGGTTCGGCTGTACAGCTGACGGTAACGTCTGTTCTGCAAGA
ACTCCTTGCGTGAGACCTTCAACTTCTGTCATGAAGGACGCCCCTCCTAA
GCCGTGTCAAAAACCGTCCACCTCTATTTTTCTTGCTGTCAAAGAGAAAA
GGCATCGAAAgctgcctccttcatcccaGATTTGGTCCTCTTTTGAAAGG
CTATTCCTAGGAAGTTCCGAGCCGGAGTTGCGTAACAGTGGACAAGGATC
GCAGGTAGGCTTACGTGCCACATTAGAGACAGTAAGAGCACTGGTACAAT
ACTACAGTCGTCTTGACACACGCGTTAAATTCGATGAAGAATGGCGAAAA
GGAGTGTGCAAGGGAGAAAAGTTCGAATTCTCGCTACGGAAGCGTGTGAA
TCAGCTATCATTAGGCGACGCTTTTCGACAAGAGGAGTTTTTGACGCTAT
TAGTCGAGTACATTTGTGCGTGTTGGGCGGAAGGGACGCCCAAGAAGCTT
CCACAGCCAGAGGATTTCAGTGGCACTCGTAGCGAGCGGCGCGCCGCAGC
AGCTGCGGCAACGTCCGCCCTTTTGCAAGAAACATGA back to topCoding sequence (CDS) from alignment at CM002460.1:303382..307368+ >rna2932 ID=rna2932|Name=rna2932|organism=Nannochloropsis gaditana|type=CDS|length=3987bp|location=Sequence derived from alignment at CM002460.1:303382..307368+ (Nannochloropsis gaditana) ATGGCTGTGGGAATTGAAGACGTTGAGTTTGAGAGTGAGCGCTTTGCCTA CGCGCGGGTCACTGGCCATCCTCTTTGGCCCTGTGTCGTCTACAACAAGT GGGGGGACATTCCGCCCGAAATAAAAGGCCAAGCTGAAGAGCTCTTTCCG AAGCCCAGCCAGATTGTTGCATATTTCATCGAACCCTGGTCGTTCTGCTT GGTCCAGAAAAAAGACGTTCGTTCCGTCCAAGACGtcgtcgaggaggaca tcaTCAAGAAATGCAAGAGGCCCAAGCAACGACACGACCTGCGTTTAGCG ATCGACTGCATGAAAAGTATGCAGTTTCAGCCTGAGGATGCGTTTAGTGT CCCAGGCGTTTCGGATCCGCCCAATGCAAGAAGTGAAAAAAATTTGGgac aggaggcgggggagggtccCGCGATGCCTGCGTGCCCGGGGAAGGCCACA AGTGTCGCGGTCAGGAAAGCAAATTCGACTGCCAAACGTGCACGTGGTCA CTCAAGCGCCGATGAGAGGAGTATGGGAGTCGAAGATAGGATGGAAGATC GGGGGACAGCTCGCACGACTTCATCGCAGTCGCGCCCGGCCGCGTGCACA CCGAAGGCGAAGCAGCGGACACGGGCACCCCTGGCACAATCTCCGACTGC ATCCTCGCGATCTGGGCCACCGGTCGCGCCTATAGCGAGCGTCATCACTC CCTCGACTATTCATGATGCACCCCGAACGCAGCTcaggggcaaggaaagg gcTAAAAGCAGCGCTGGCAGCAAACGCAAACTCCCCCCGTCCGGCCCTCG CCCCATTTTCACCGCCGTTAAAGCTGACGCGATCGGGTCGCCAGGCCCAA TGCATGCCGTGGAGAGAATAGGACAGAAgccggggagaaagaaagcgtgC ACAGGGCCTGCTAAAGTATCACCACTGTCTGTTCCCATGCACCCTGCTGG CGGCGCCTCGTCCCCTGCGCGGACGGTCGAGCGAATGGAGAAGGGCTTTG GAAAGCTTGTGCGAACGATTTATCCCCGGCTCAGCTTCCTCTGCAGACAA GAGGCTCGTCACCGAGCCTCCATGTCGTCTTCGGTGTCCAAGAAGGGGGC GGATACGATTGGAAACAGGACCCGTGGTCCGGGCTACGGAAAGTGCGTAC CCGCTGCCTCGACACCTTTGAAGGACTTGAGTCTCGAAAAACTGATGGAT GACGGGGTCATTGAAGAAGGTATGCGTATAATCCTTCCCCCACACTCGGC CGGGCATTCCGGCGCAGAGGAAAACAGAGATAGCTCAGGCAATGAGCTCG CACGGAGTACCCACGATGCGGCGGAAGAACAAACAGCCTTGATGATCGGC GACGGTCAGTTGCTCTTCAACGAGAAAGTCTATGACAGCGTGGAGGATGT CCTGGAGGTGTGGGTGGGGCTAAAGCTGAataaaagagaaaagaagggct gGGCGCAAGTTCGAGTGCGAGAGGGTGCGGTGACACGCAGCTTGGCAGTA CACGTGGAGCAGAAGCTTCGGGATCatcacgaggaggaggcgcggttGCG GGCTGGGGCTCAGGAGGCGATATCTGTACTAGCGGCACCTTCCCAGAATA AAGCGCCTGAGGGAAGCCACGACATCAAccaaaaggaggaggatactGCG GCAGCCCTTGTCGCATCGTTGGCGATGGAGTCACCGACAGGGAGAACTTT CTCAGACAGGATAGCACCAGACCTTCACAGTGGTAAAGCATCCTTCAAAA TTGTGGGACAACCAGGCGTTTCCAACGTCAAGAAAGGACGTAGTATTGTC AAGCAAGAGGGTAACGGGAAGGCATTTTTCGTGAGGATACAagacgaggc agagaaagagatgcTTCCGTGTCATCCGGTCAGCCTTTTCGTccaggaaa aaaatatcaCTCCTATGCCGAAAGTGGAAGACAATTTAGAGGCGGCATCA AGCATTCCAAGGTCTCTAGGAAAGGCACCCAAAAAGCCTAGCTCTACGAT GCAGCAACATGTAACGGTACCAAATTCAATACGACCGCCATGCGACGACA ATTTCCAAGAGAACCCATTTGTTGGCTTTTGGAAGACGGCAGACCCCGCC GTGGTGGAGCGGGCGATGGAAACGTACGCCGTATGGGTGTCTGAGGCATA TCCTGTGCTGCAGCGGAATGACTCGAGCTTCGTCGGCGTGggcgaagaca aggaggcTGGTATTTCGGCAGCTAGTGCAGAAAACGTGCATGGAAACGGC TGTACCGGTGGTGGCGACGAGGGGACAGAGCGTCAGCTGAGAAAACAGAG TGCGCGCAAGTCAATGCGTGTGAGTGACCGACTGCACGAGATCCAGGCTG GAAAATTACCGCCGCACACCCTTCTGATATGCGAAGAATACGGCTTGACg ccggagggcgtgggaaggcggACTTCCAGCCACCATGCAAACATCGCACA GCCGTTCACAGTAAAGGTCCATCCTGACGTTCCATTCCTTTGCGACGTGC ACGCGCACCTCGCAGACTCGGAGATAATTGGCTTTTTAGCCGGAAAATTC AACGCCGAGGAACGGTGTTTGTACATTcaggcccccttcccctgtcgGGC GACTGCACGGAGTGATGACGGCTCAACGGACGTAGAAATGGATCCTGGAA GCGAGATCGAAGTGCGGGAAGTGATAGGCCGGCATGGGATGGCAGTAACG GGCTGGTATCACTCGCACCCTACCTTTCAACCCGAGCCCTCCCTGATTGA CATCGAGAATCAGTATAACTATCAAATGTTGCTGCGGGATAAGACAACGG CCGTGGAGCCCTTTGTCGGCCTCATAGTAGGGACGTATGATGATTCGTAT CAAAACCCTGTTTCTCTCTTGCGCTATTTCCATGTTCGACACATTCGAAT GGGTTCGGCCTCAAATGACGGCGTCAGTTTTCCGATGGCTTTGGATGTTT TGCACACGCGCAAACGGAAAGGCGAGTGCTCAAAAAGTCCGGATTCTGCA TTGTCGGGTTCCGTCCACGACGAGCGCATTGACACCAAGGGAGATGGTGC GGATCCTGTCACAATTGGCTTGACGCAAGGAGCGCTCGCAGCTGCAACAT TGGTCCGAACCAAGAGCCCtcagaagcagcagcaggaagaaACAGATGCA GCGCTTGGAATGATGAGCCTCTTGGCCTGTGCTCTTCCCACGTTGcccgt tccttcctcccgcggACCTGGTACCCATGACCCATTGAATGAAGAGGGGG GATCCAGGACTCAGCAAAGCGATATGATATGTGGAAAAAGCCAACAACGC AACCGAGaagtggggaaggagggaaatttGGCACCGAATGTTTACGTCTC ATCAGCTCTGGTGACTTCCGCTGGCACGATACCTGAACAACAGGCACAGA AATGGGACGGGTTCGGCTGTACAGCTGACGGTAACGTCTGTTCTGCAAGA ACTCCTTGCGTGAGACCTTCAACTTCTGTCATGAAGGACGCCCCTCCTAA GCCGTGTCAAAAACCGTCCACCTCTATTTTTCTTGCTGTCAAAGAGAAAA GGCATCGAAAgctgcctccttcatcccaGATTTGGTCCTCTTTTGAAAGG CTATTCCTAGGAAGTTCCGAGCCGGAGTTGCGTAACAGTGGACAAGGATC GCAGGTAGGCTTACGTGCCACATTAGAGACAGTAAGAGCACTGGTACAAT ACTACAGTCGTCTTGACACACGCGTTAAATTCGATGAAGAATGGCGAAAA GGAGTGTGCAAGGGAGAAAAGTTCGAATTCTCGCTACGGAAGCGTGTGAA TCAGCTATCATTAGGCGACGCTTTTCGACAAGAGGAGTTTTTGACGCTAT TAGTCGAGTACATTTGTGCGTGTTGGGCGGAAGGGACGCCCAAGAAGCTT CCACAGCCAGAGGATTTCAGTGGCACTCGTAGCGAGCGGCGCGCCGCAGC AGCTGCGGCAACGTCCGCCCTTTTGCAAGAAACATGA back to top
|