rna2911, rna2911 (mRNA) Nannochloropsis gaditana

Overview
Namerna2911
Unique Namerna2911
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length378
Alignment locationCM002460.1:244258..244692 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100187g1.5313.mrna
Orig protein idgnl|cribi|Naga_100187g1.5313
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:244258..244692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100187g1gene2790Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2911rna2911-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27779.1cds2903Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2911 ID=rna2911|Name=rna2911|organism=Nannochloropsis gaditana|type=mRNA|length=378bp
ATGTCCTCCTCGCTATCTTTTTCCAACGACGCTCTACGCCCCTCGTTGCC
GCCCACTTCCCAGGGCCCTCGTCAGCAGCCTGAACAGCAAATTCCAAAAC
CTAAAGTCATCCTCTTACTACATTCTGACAAGCAAAATCACGGCCTTTTG
CAAAAATTGAAGCGTCACGCCGACCTCGTGAAGTTCACGAACCTCGAAAC
ATCGGATGCAGTCGTATCATGCCGCAATCGGACCTTATCTCTGCTACTGC
TCACTTTAAATGAAATGAACAATCCCTCACTCTTTGCAAAAACGGTAATC
CGTCTTTCTAATTTCCAAGCCAAGAGCTCGCAACACCCCATCGCCCGACC
TCGACGATGCTTGCCGAGGAGTCTGTGA
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protein sequence of rna2911

>rna2911-protein ID=rna2911-protein|Name=rna2911|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MSRDGHTMIIVSFQDVKRCLEAAWLEYCEIANPAAATPELGHLVGSEHEV
PPQLVPAYMMGDIGRGGRKEKKDGDEGKRKRQLYMGLCFTSSVRVQGIRA
GQPA
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mRNA from alignment at CM002460.1:244258..244692-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2911 ID=rna2911|Name=rna2911|organism=Nannochloropsis gaditana|type=mRNA|length=435bp|location=Sequence derived from alignment at CM002460.1:244258..244692- (Nannochloropsis gaditana)
ATGTCCAGGGACGGACATACGATGATCATCGTCTCCTTCCAAGACGTGAA
ACGCTGCCTGGAGGCGGCCTGGCTCGAGTATTGCGAGATAGCCAACCCCG
CCGCCGCGACGCCGGAGCTTGGGCACCTGGTTGGGTCAGAGCACGAGGTG
CCGCCTCAACTGGTCCCTGCATATATGATGGGCGATATCGGGGTAGGAAG
GGGGGGGAGAGATGCGGGGTATCCCCATCCTCATCAGCAGCAGCAGGAGG
CGATGATGATTATGATGCAACAGGGTCTCGGCGGGGGTACTACTGGATAT
GTGCCATCATAGCGGGGCGGGAGGAAAGAAAAGAAGGACGGGGACGAAGG
AAAGCGAAAGCGACAACTGTACATGGGCCTGTGCTTTACTTCTTCTGTAC
GTGTCCAGGGTATAAGGGCAGGACAACCTGCCTAA
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Coding sequence (CDS) from alignment at CM002460.1:244258..244692-

>rna2911 ID=rna2911|Name=rna2911|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at CM002460.1:244258..244692- (Nannochloropsis gaditana)
CGGGGCGGGAGGAAAGAAAAGAAGGACGGGGACGAAGGAAAGCGAAAGCG
ACAACTGTACATGGGCCTGTGCTTTACTTCTTCTGTACGTGTCCAGGGTA
TAAGGGCAGGACAACCTGCCTAAATGTCCAGGGACGGACATACGATGATC
ATCGTCTCCTTCCAAGACGTGAAACGCTGCCTGGAGGCGGCCTGGCTCGA
GTATTGCGAGATAGCCAACCCCGCCGCCGCGACGCCGGAGCTTGGGCACC
TGGTTGGGTCAGAGCACGAGGTGCCGCCTCAACTGGTCCCTGCATATATG
ATGGGCGATATCGGGCGGGGCGGGAGGAAAGAAAAGAAGGACGGGGACGA
AGGAAAGCGAAAGCGACAACTGTACATGGGCCTGTGCTTTACTTCTTCTG
TACGTGTCCAGGGTATAAGGGCAGGACAACCTGCCTAAATGTCCAGGGAC
GGACATACGATGATCATCGTCTCCTTCCAAGACGTGAAACGCTGCCTGGA
GGCGGCCTGGCTCGAGTATTGCGAGATAGCCAACCCCGCCGCCGCGACGC
CGGAGCTTGGGCACCTGGTTGGGTCAGAGCACGAGGTGCCGCCTCAACTG
GTCCCTGCATATATGATGGGCGATATCGGG
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Synonyms
Publications