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Properties
| Property Name | Value |
|---|
| Product | exonuclease 1 |
| Orig transcript id | gnl|cribi|Naga_100187g4.5311.mrna |
| Orig protein id | gnl|cribi|Naga_100187g4.5311 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:237259..239319 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2908 ID=rna2908|Name=rna2908|organism=Nannochloropsis gaditana|type=mRNA|length=1247bp
CTCCCAGGGGAGGGTCTCGCGTGACCCTGTTTCTCGTGGGTTTGGCAAGC
GCTACTGTTGTGACTTGGAAGGTCGATCGCGGTAATCTGCTTGGTGTTTA
CACACCGGCCTTAGGACGTCATTCCTCTAGCATTCTTGTCTCTGAAGTGC
ACGAGAGCAGCCCCGCGCCCTCAGCGCGATTATCCCGCAGGTCATCTCAT
GGCCATTGGCATTTCAACTGCTCACCAAAATGTCATCAACTCACACTTTC
ACGTAGTAGGGCACGTGGGTAGGAGCAGCATGTCGCGTTTGATTCGAAAA
GGGCTGGATACGCTGGGAAAGGCCTTGCGGGAGACGGGCCAGGCACTTGA
TCGCACAGGAATGGAGGCGCTGGGCTCCGACAAACATAAAGAGCTTTGGT
CACGGCATCGACAAGTTTCCAACCTATTTGACCAACGTCCGCGGGTCGCG
AGCAACGCTTTCGTCTCCCCCTCGGCAACGGTCGTTGGAGAAGTGTCGCT
CTGGGACAAAGTGTCCATCTGGTACGGCGCTGTCATCCGTGGTGATCGCA
ACAGCGTCAAGATTGGGAACTGCACGAACGTACAAGATCACGCTGTCATC
TGCACCGTCCCTTCCCTGGACTCTGGCTTCCCCGCCACAGTGGACATAGG
GAACCTGGTGACCATCGGCCACAGCGCCACCATCACCTCCGCTACCATCG
AGGACAAGGCTTTGGTGGGCATAGGCAGCATCGTCAGCGAAGGCGCTCTG
GTCGAAACTGGAGCTCAGCTGGCGGCGGGCTCTGTCGTCCCGCCGGGAGG
GCGCATTCCGGCGGGGGAACTCTGGGGAGGGAATCCCGTCAAGTTCATCC
GTAAGCTCGAGGACGAAGAGGTGCTGGCGAACGTGGCAGCCGCCGAAGCC
TACCACGCCCTGGCTCAGTCCCACGAGAACGAGTTTTTGCCCTTTGGGGC
CGCGTATCTGGATGCCGAGAAAGTGAAGGTGTCCAAGTAGGGACCAGGGG
GGGAAAGTGGGGTGTATACGAGCGAGGTGGGGGGGAGGGGCCGGGGGTGG
ACAGGGTATTTACTGAGGGTGGGCGTGGCCGATGAGAAAGGAGGGGAGGA
GGAGGAGGAATGGCGTGTCGTAGGCGCAACAAGGAGTAGGATGGAGGGGA
GACGGAGGGAAGGGAAAGAAAACAACACAAAAGAAGAAGAAGAAAAAGAA
GCAGCAGTCAGGGCACACACAAAGACACGCCCTATGGGGCCGAAGCC back to topprotein sequence of rna2908 >rna2908-protein ID=rna2908-protein|Name=rna2908|organism=Nannochloropsis gaditana|type=polypeptide|length=355bp
MGIAGLLPLLKSVTHTVHLREYQGMMAGIDAFCWLHRGAFTCCTELVLGK
TTDKYIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEAR
AKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYE
ADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNL
ALNEDYDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYK
KVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPEDGGIVPLTPF
TPAHLELDLRFLGPRHAPELARAVAEGRLNPDTLQAYAGSEGERPGLPYP
PRDGD back to topmRNA from alignment at CM002460.1:237259..239319+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2908 ID=rna2908|Name=rna2908|organism=Nannochloropsis gaditana|type=mRNA|length=2061bp|location=Sequence derived from alignment at CM002460.1:237259..239319+ (Nannochloropsis gaditana)
tcctcgctgacATTCGGGGTCGTGACCAAAACGCGCTCGACCCGCGTCCA
GGTCCGCTATTTTCGTCGTTCTTGCGTGTTCTCTTTGGGAAATATAGATA
GCGTGAGTAGAGGCCACTGAATTCTGTTCTTCTGACACTTATTCACACCC
TGCTTACACCCTACCTcccctcacttccttctctttgtcCTCGTCAAAAT
ACCACCCCATGTACCCCCTAACCCGTCACGTAAACAAGTGACCAAGCATG
GGCATCGCAGGCTTGCTTCCGTTGCTGAAATCAGTGACGCACACCGTACA
TTTGCGAGAGTATCAGGGAATGATGGCGGGAATCGACGCTTTCTGTTGGC
TGCACCGTGGTGCCTTTACATGTTGTACGGAGCTCGTGCTCGGTAAAACC
ACAGACAAATATATTCGTTTCTGTATGGAACGTGTACGCATTTTGCAGGA
GAATGGGATCACGCCATTCATGGTATTTGATGGAGCTAGCATTCCGGCCA
AGCGCGACTTGCATCTCTCCCGACGAGCAGCTCGAACAGAAGCACGAGCC
AAGGCGTTGGCAGTgcacgaggaagggcaaATCGGACAGGCACGTACGTT
GTTTCAAAAAGCTGTCATTATCACCCATGAAATGGCCTACGAATTGATCA
AGTGCCTGCAAGAAGCGAACGTCCGGTACATGGTGGCACCGTACGAGGCA
GACGCGCAATTGGCCtatttggcgcgaaaaggcGTGGTGGACCTTGTCAT
CAGCGAAGACTCGGACACACTCCCCTACGGCTGCCCCCGCGTGCTCTTTA
AattggacaaggaagggcgcGCGCAAGAGATCGAGCGTCGAAACTTGGCG
CTGAACGAAGACTACGATTTCGAAGGGTGGACAGAGAACATGTTCCTTGA
CATGTGCCTGTTGGCCGGCTGCGACTACCTGCCTAACCTGCCCGGTCTGG
GCATCAAGACCGCACACAAGCTGGTCCGACAGCATCGCACGTACAAGAAG
GTCCTTGGGGCCTTGGCGACCccgggaggcaaggagatggCGGTTCCCGG
CGACTACATGGAACGCTTTGCCCGTGCCCGCTTGACCTTCCGCCACCATT
ACGTCTACGACCCGGAGGACGGTGGCATCGTCCCCCTCACGCCTTTTACC
CCGGCGCACTTGGAGCTGGATTTGCGCTTTCTGGGGCCGCGGCATGCGCC
GGAGCTGGCACgggccgtggcggagggacgCCTGAACCCAGACACTTTAC
AGGCCTACGCGGGGtcggaaggggagaggccaGGGCTGCCTTGTCGTGGG
GATCggaaagacgaagaggagggaggcggagcagGTCGAAGGGAGCAcca
aggccggggaggggaggtgggtttaaggatggagggggtagAGCAGCACG
TCCACATCCAACCGGCGTGGAGCGAGtcccgaggaagggagggagggaag
gagagagggaaagagtgcCTGGCAGCGGTCTCGGTCAAGACGCAGACAAT
TGGAGGCCGAAGCTTGTTTTGGATGCAGCGAagcgcagaggaggaggctg
ctaTGGTCAGGAGGGCGTCAAAAGAGAGGGTAGagaaggccctggccgcG
GTGGAAGGCCGCCGTGCGAGGAGACAGGCCCCaacaggaaagggagacga
agaaggagggcatgcaggggaaaggagggggagcggggtgacggggatgg
acgaggagagccTGGGAGTGGGAGTGCGGGGCTCGGCCACTCAGGGGATG
GTTCTGCACGGGCatgctgggagggagagggaccgggcgccctcccccgg
tggTCATTTggaaaggggcgagaggaagcaggagacggcggaggcgggcg
acgaTCGCGAGGCCAGGGAGTCGGAAGCGTGGGAGGCACAGGAAGCCGGC
ATGCGGGGGTGCAAGGTGGGCAAGGCTGAAAGCTCCTACTTCCCACGACG
GCCCCTGGCGCCTCTGaggctcgcctcctcctccaacgcgcCTTCTggcc
caccctccttcccattccctgCTTCGCGTCCCTCCCAGACCCTCCACGCG
ACGGAGACTGA back to topCoding sequence (CDS) from alignment at CM002460.1:237259..239319+ >rna2908 ID=rna2908|Name=rna2908|organism=Nannochloropsis gaditana|type=CDS|length=2136bp|location=Sequence derived from alignment at CM002460.1:237259..239319+ (Nannochloropsis gaditana)
ATGGGCATCGCAGGCTTGCTTCCGTTGCTGAAATCAGTGACGCACACCGT
ACATTTGCGAGAGTATCAGGGAATGATGGCGGGAATCGACGCTTTCTGTT
GGCTGCACCGTGGTGCCTTTACATGTTGTACGGAGCTCGTGCTCGGTAAA
ACCACAGACAAATATATTCGTTTCTGTATGGAACGTGTACGCATTTTGCA
GGAGAATGGGATCACGCCATTCATGGTATTTGATGGAGCTAGCATTCCGG
CCAAGCGCGACTTGCATCTCTCCCGACGAGCAGCTCGAACAGAAGCACGA
GCCAAGGCGTTGGCAGTgcacgaggaagggcaaATCGGACAGGCACGTAC
GTTGTTTCAAAAAGCTGTCATTATCACCCATGAAATGGCCTACGAATTGA
TCAAGTGCCTGCAAGAAGCGAACGTCCGGTACATGGTGGCACCGTACGAG
GCAGACGCGCAATTGGCCtatttggcgcgaaaaggcGTGGTGGACCTTGT
CATCAGCGAAGACTCGGACACACTCCCCTACGGCTGCCCCCGCGTGCTCT
TTAAattggacaaggaagggcgcGCGCAAGAGATCGAGCGTCGAAACTTG
GCGCTGAACGAAGACTACGATTTCGAAGGGTGGACAGAGAACATGTTCCT
TGACATGTGCCTGTTGGCCGGCTGCGACTACCTGCCTAACCTGCCCGGTC
TGGGCATCAAGACCGCACACAAGCTGGTCCGACAGCATCGCACGTACAAG
AAGGTCCTTGGGGCCTTGGCGACCccgggaggcaaggagatggCGGTTCC
CGGCGACTACATGGAACGCTTTGCCCGTGCCCGCTTGACCTTCCGCCACC
ATTACGTCTACGACCCGGAGGACGGTGGCATCGTCCCCCTCACGCCTTTT
ACCCCGGCGCACTTGGAGCTGGATTTGCGCTTTCTGGGGCCGCGGCATGC
GCCGGAGCTGGCACgggccgtggcggagggacgCCTGAACCCAGACACTT
TACAGGCCTACGCGGGGtcggaaggggagaggccaGGGCTGCCTTACCCT
CCACGCGACGGAGACTGAATGGGCATCGCAGGCTTGCTTCCGTTGCTGAA
ATCAGTGACGCACACCGTACATTTGCGAGAGTATCAGGGAATGATGGCGG
GAATCGACGCTTTCTGTTGGCTGCACCGTGGTGCCTTTACATGTTGTACG
GAGCTCGTGCTCGGTAAAACCACAGACAAATATATTCGTTTCTGTATGGA
ACGTGTACGCATTTTGCAGGAGAATGGGATCACGCCATTCATGGTATTTG
ATGGAGCTAGCATTCCGGCCAAGCGCGACTTGCATCTCTCCCGACGAGCA
GCTCGAACAGAAGCACGAGCCAAGGCGTTGGCAGTgcacgaggaagggca
aATCGGACAGGCACGTACGTTGTTTCAAAAAGCTGTCATTATCACCCATG
AAATGGCCTACGAATTGATCAAGTGCCTGCAAGAAGCGAACGTCCGGTAC
ATGGTGGCACCGTACGAGGCAGACGCGCAATTGGCCtatttggcgcgaaa
aggcGTGGTGGACCTTGTCATCAGCGAAGACTCGGACACACTCCCCTACG
GCTGCCCCCGCGTGCTCTTTAAattggacaaggaagggcgcGCGCAAGAG
ATCGAGCGTCGAAACTTGGCGCTGAACGAAGACTACGATTTCGAAGGGTG
GACAGAGAACATGTTCCTTGACATGTGCCTGTTGGCCGGCTGCGACTACC
TGCCTAACCTGCCCGGTCTGGGCATCAAGACCGCACACAAGCTGGTCCGA
CAGCATCGCACGTACAAGAAGGTCCTTGGGGCCTTGGCGACCccgggagg
caaggagatggCGGTTCCCGGCGACTACATGGAACGCTTTGCCCGTGCCC
GCTTGACCTTCCGCCACCATTACGTCTACGACCCGGAGGACGGTGGCATC
GTCCCCCTCACGCCTTTTACCCCGGCGCACTTGGAGCTGGATTTGCGCTT
TCTGGGGCCGCGGCATGCGCCGGAGCTGGCACgggccgtggcggagggac
gCCTGAACCCAGACACTTTACAGGCCTACGCGGGGtcggaaggggagagg
ccaGGGCTGCCTTACCCTCCACGCGACGGAGACTGA back to top
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