rna2901, rna2901 (mRNA) Nannochloropsis gaditana

Overview
Namerna2901
Unique Namerna2901
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1496
Alignment locationCM002460.1:218882..219657 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100187g12.5314.mrna
Orig protein idgnl|cribi|Naga_100187g12.5314
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:218882..219657 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100187g12gene2780Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2901rna2901-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27780.1cds2893Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2901 ID=rna2901|Name=rna2901|organism=Nannochloropsis gaditana|type=mRNA|length=1496bp
CCCTCCTCCCCATTGAGGACCCTGCCTGGCTCAACTCGCTGGGCTTGCCC
GCGTGGTTTAACGCGATGGCAAGGGACAGAGACATGATGAGGAGGGAGGG
GAGGGAAAGGCAAAAGGCCCGCATGGGTCCCTCCAGTGAAGCGGACGAAA
TCCCCGACGGTCCTGGGAACAAGGCCGGAAACGCCGGAAGCACCTACCTT
AACAGGCGGATCCTGACCTTCCCAGCCATCCTTCCCGCACTTTTCCGTCT
GGCGGAGCCTGGAGATAGGGGGACGGACGAGGAGCAGGGTCGCACCTCCC
TCAAATCAGACTGTGCAGAGGTTCCCCTCTGTGGTACACCTGCGGCGGCG
GGGGGAGGGGGGGGCGGGGAGGGGAAGAGGATGGGGAGGAGGAAGTGAAG
GGCGGGTGCGGGTGGCAGAGGAGAGAATGGCAGAGAAGCAAGCCGTCCTC
GGGGCCGACGGAGGAATTCTTCCCTCCTCCTCAGGCGTGTCAGCACCTCC
TTCTCCCCTCCCTCCTCCTGTTTCCCTCCGTTTGGATGAAGACGTACGGG
GAGGTCTGGAGGTGCTGTTCAGAGAGCGAGGTCGGCGAGGTCGCGCCTCC
TTAACAAATGCATTGTGCGGTTGGAAGGAGGAGGAAATGTGGGCGTGGCG
ATGGTGGACGTGTTTTTTGATGGATGAGGAGGGCGTGGGAGGTGAGAGCG
GGGTCTGGGGGGGAGGAGGTGGGGGATGTCAGGAGGCTTTCGCGGAATTT
TTGCGGGAGTGGCGGGAAGAGCGACAAAGGAGATGGGGAAAGGAGGGAGA
TGTAGGAGGTGTAGAGAGAGATGGAGGAGGAGGGAGGGAGGAGGAGGGCG
AGGTGGTCGTATGGGAGGTGGACGAAACGGAGGATCGCCTGAGAAATCGC
CGAAAGTTAAGGCGAAGGCCATGGGCCTCGGTGTTTTTCGAGGAAGGAGA
AGGAGGGGAGGAGTGGTGGGAGGAAGAGGACGTGGAGGTGGCGGTGCTAC
TTCGGCACCTGGAGAAGGGAAGAAGGTTGGGGGACCTCAAGAAAGGTGAT
GAGGAGGGAAGGGATGAGAGAGAAACCAGACCAACGTCGGGAGTGGAAGG
GTCAGAAAAAGGTAAGAAGGAGGAAGAGGGCGCGAAAGCCGTTGAGAAGG
CGAACGTGGCACCACACGTCAGCTGTGCCCCTGAGAGGGTGATGGAGAGG
GAAGGAGGAGGAGGGAAGGTTCTGGAAAGGGGGACGGAGTTTGTGGAGGA
TGGGCCTGGAAGGGGGCTTTGGAAGGAGTTGGTGGCTTATCAGAAACGAA
GTACCGAGAAAGGAGAGGAAGGGGGGGAGGAGGAGGAAGAAGAAGGAAGT
GAAGAGACGGAGGAAGAAGAAGCGGGGGAGGAAGAGGGAGGGAAGAGGGA
AAGGAAGAGGGAGATGGAGGAAGAGGGCGAGGGAGTAGGGGGGGGGAAGG
AGCAGGAGGAGGTGAAGGCAAAGATGGAATCTCATACGGGAATAAG
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protein sequence of rna2901

>rna2901-protein ID=rna2901-protein|Name=rna2901|organism=Nannochloropsis gaditana|type=polypeptide|length=118bp
MTISPVASEQPCLFAVMHITQASTATSPWPIPDERRSLPANFQLALSRVK
GYANFLVLFAAYCWAFLAPLEGHARWQIKIIIVLFTFPLLGPSYRIAFHA
ASAFGLSVRVPQQAWLWK
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mRNA from alignment at CM002460.1:218882..219657-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2901 ID=rna2901|Name=rna2901|organism=Nannochloropsis gaditana|type=mRNA|length=776bp|location=Sequence derived from alignment at CM002460.1:218882..219657- (Nannochloropsis gaditana)
ATGACCATTTCTCCCGTGGCCTCTGAACAGCCATGTCTCTTCGCCGTGAT
GCATATTACGTGTGCTCACGAGCTAGCCCCGCAACGTTGACACCCCAGAA
AGAAAAATCACATCCCTCTACCGTTATTTACTTCCAGGTCATAGAAGCCT
GAAATTGGGGTCATGGACGGCTTGGAACGAGCATTTTCCTACATGACGGG
CCTTTTTGAGCCAAGCTTCAACTGCAACAAGCCCATGGCCCATCCCCGAT
GAACGCCGTTCTCTCCCGGCGAATTTTCAACTCGCTTTGAGTAGAGTCAA
GGGCTATGCCAATTTCCTTGTCTTATTCGCTGCTTATTGCTGGGCTTTCC
TCGCGCCTTTGGAGGGCCACGCACGGTGGCAGGTAGGGGTTTGAGGAATT
TAGGCAGGGTGGAGCGGGAACGAGGCCTGATAGCGGTTTTCTCGAGAGGG
TTGAAGGCAAAGGCTTAAGAGGGAGCATTTCTTCCTTCCGATCCATCCTT
TCTCAACTTTCTTCCTTGTTTCACTCCCTTCATTTTCCTTCCCCAGCCTT
CCTCCTCCCTTTCTCCCTCCTCCCTCCAACTCATTCATTCCTACCCTCAA
ACGCTCCTCTACTCCTCCTCCTTCCCTCTCCCCTCACCCGTCCCCCCAAG
ATCAAGATCATCATCGTTTTATTTACTTTTCCTCTCCTGGGCCCCTCCTA
CCGAATCGCTTTCCACGCTGCATCCGCTTTCGGTCTGAGTGTCCGAGTTC
CCCAGCAGGCCTGGCTATGGAAGTGA
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Coding sequence (CDS) from alignment at CM002460.1:218882..219657-

>rna2901 ID=rna2901|Name=rna2901|organism=Nannochloropsis gaditana|type=CDS|length=1071bp|location=Sequence derived from alignment at CM002460.1:218882..219657- (Nannochloropsis gaditana)
ATCAAGATCATCATCGTTTTATTTACTTTTCCTCTCCTGGGCCCCTCCTA
CCGAATCGCTTTCCACGCTGCATCCGCTTTCGGTCTGAGTGTCCGAGTTC
CCCAGCAGGCCTGGCTATGGAAGTGACCAAGCTTCAACTGCAACAAGCCC
ATGGCCCATCCCCGATGAACGCCGTTCTCTCCCGGCGAATTTTCAACTCG
CTTTGAGTAGAGTCAAGGGCTATGCCAATTTCCTTGTCTTATTCGCTGCT
TATTGCTGGGCTTTCCTCGCGCCTTTGGAGGGCCACGCACGGTGGCAGAT
GACCATTTCTCCCGTGGCCTCTGAACAGCCATGTCTCTTCGCCGTGATGC
ATATTACATCAAGATCATCATCGTTTTATTTACTTTTCCTCTCCTGGGCC
CCTCCTACCGAATCGCTTTCCACGCTGCATCCGCTTTCGGTCTGAGTGTC
CGAGTTCCCCAGCAGGCCTGGCTATGGAAGTGACCAAGCTTCAACTGCAA
CAAGCCCATGGCCCATCCCCGATGAACGCCGTTCTCTCCCGGCGAATTTT
CAACTCGCTTTGAGTAGAGTCAAGGGCTATGCCAATTTCCTTGTCTTATT
CGCTGCTTATTGCTGGGCTTTCCTCGCGCCTTTGGAGGGCCACGCACGGT
GGCAGATGACCATTTCTCCCGTGGCCTCTGAACAGCCATGTCTCTTCGCC
GTGATGCATATTACATCAAGATCATCATCGTTTTATTTACTTTTCCTCTC
CTGGGCCCCTCCTACCGAATCGCTTTCCACGCTGCATCCGCTTTCGGTCT
GAGTGTCCGAGTTCCCCAGCAGGCCTGGCTATGGAAGTGACCAAGCTTCA
ACTGCAACAAGCCCATGGCCCATCCCCGATGAACGCCGTTCTCTCCCGGC
GAATTTTCAACTCGCTTTGAGTAGAGTCAAGGGCTATGCCAATTTCCTTG
TCTTATTCGCTGCTTATTGCTGGGCTTTCCTCGCGCCTTTGGAGGGCCAC
GCACGGTGGCAGATGACCATTTCTCCCGTGGCCTCTGAACAGCCATGTCT
CTTCGCCGTGATGCATATTAC
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Synonyms
Publications