rna2899, rna2899 (mRNA) Nannochloropsis gaditana

Overview
Namerna2899
Unique Namerna2899
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length823
Alignment locationCM002460.1:205839..207559 -

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Properties
Property NameValue
ProductBEACH domain protein
Orig transcript idgnl|cribi|Naga_101232g1.3825.mrna
Orig protein idgnl|cribi|Naga_101232g1.3825
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:205839..207559 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101232g1gene2778Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27782.1cds2891Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2899rna2899-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2899 ID=rna2899|Name=rna2899|organism=Nannochloropsis gaditana|type=mRNA|length=823bp
AAGGAAGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGAAAGGGAACGAGGTCGTCGACTGGGTAGGTGTCTCT
CCCGCGGGCTACCTCCTCTCCTACTCCCGTCCTTCCCATCTCCTCACTGC
CCACAGCCTCAACGGCCGTCTGTTGGCCCGGCTGGCCTGCCGTACCGGGT
TGAGTGCCTTTTGTTTCTCCCACGACGGGCAGGTCCTGATCGTGGGCTCC
GAGACCCGACGACTGCACATGCTCTGGTGTCACTCCCTACGTCCCGCCCG
AGGGGGAGGGAGGGAGGGCTTGGAGGGACTGGTCGCCACAAACGGGGCCG
GTCCGGGCCTGCGGGTGCCTTCCTTTCCCGCCTCCATCACCGCCTTGGCC
TTGACGACGGAGGAGAAGCACCTGTTGGTAGGTCTAGGGAACGGGCAGTT
GTATACATTGACGCCAGAGGCGGGGTATTTGCGGGCGCGGTTGAAGAAGA
AATTGGAAACGATGGGATTCTACTGAAGGAGGGAGGGAGGGAGGGAGGGA
AGCACGGAGGGGGGACGTGTCAACAAGTAATGAAAGAGGGAAAAAAAGAA
GAGGGAATGAGGGCAGGAGGAAGGGAAGGAAGAAGGGAGGGAAGGAAGGC
GAGGTCGAGGATGTGGATAATGATGCGGGCGAAGGCCAGGGGCCCCATGC
TGTAAATGATTTGTGAAATTATTTAAGGGACGAAGGTGGTATACACGGTG
CTGCTGCACGTTCCCTTCAAAGCATACTTCAGCTTGAAACAAGAAAAGGA
AGAAAGCTGTCCCAGGCATCACA
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protein sequence of rna2899

>rna2899-protein ID=rna2899-protein|Name=rna2899|organism=Nannochloropsis gaditana|type=polypeptide|length=502bp
MASDGEEAAGTGTGSDEMGRTGGGHARGARVRATMKASVRRPRNGAIRSM
VPLPEDFAPFPILAPSVTDGTGGRTDGSEERMMGKARGAVSQGWHPCEVI
RPLTVTPGVCQLHDGGLCFLRPAPLPSLPSTLRSRRRRRAGPLQSFPSTL
IPLPSILALFPRRYQQQDAIALELFLEDHTSLFLNFHTQAAALSVSKHVQ
NHHPPVLAPRLNLSPRRLLVHAKTAHGHSLTQAWVRREISNFEYLACVNA
AAGRTHNDLSQYPVFPWILADYTSEVLNLNDPHTFRDLKWPMGAQTETAR
QRLQDRYAALREGYGEACFAGDSGSSLPPFHHGSHYSNAAFVLWYLLRLE
PFTSLHREFHSGHFDLPDRQFRSLRTAYQGCVTNPNDVKELIPEFFCLPE
FLSNVNRVSLGRTQSGDEVGDVELPPWAHGSVDDFVRMHREALESEFVSA
HLHHWIDLVFGYKQRPPFLPSPSSSSSTLSAALRPRREGETPPPRARCGR
LQ
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mRNA from alignment at CM002460.1:205839..207559-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2899 ID=rna2899|Name=rna2899|organism=Nannochloropsis gaditana|type=mRNA|length=1721bp|location=Sequence derived from alignment at CM002460.1:205839..207559- (Nannochloropsis gaditana)
AGCAGATATTTGCAGAGGGGGGGTCGGAGCAGCCCTCTGGTCCGGCTCGT
ACGGGCGACCGCCGGGACTTGAATTCCCTGCCACCACCTGCCTTCCCTCC
CCTTCCCGCCAAGGGCGAAGAGCCGGGGCGAGGCGATGAGGAGGGAAGGA
GGGGTTCGGAGGAGGTACGGGAGGCAGTGACGACAACAGATGGAGTTAAA
CAGAAGGATACGATGGCCTCGGACGGGGAGGAGGCGGCAGGCACGGGTAC
AGGCAGTGATGAGATGGGAAGGACGGGAGGCGGCCATGCGCGGGGGGCGC
GTGTGCGTGCCACGATGAAGGCAAGCGTCAGAAGACCCAGGAACGGAGCG
ATCAGGAGCATGGTCCCGTTGCCGGAAGATTTCGCGCCATTTCCTATCTT
AGCCCCCAGCGTGACCGACGGGACTGGTGGTAGGACCGACGGGAGCGAGG
AGAGGATGATGGGAAAAGCCCGAGGGGCCGTGTCGCAGGGCTGGCACCCC
TGCGAGGTCATTCGACCCCTGACGGTTACTCCGGGTGTCTGCCAATTGCA
TGATGGAGGCCTCTGCTTCCTGCGTCCGGCCCCGCTGCCCTCCCTCCCTT
CCACCCTGCGCAGCCGCAGGCGGAGGCGCGCGGGGCCTTTGCAGAGTTTT
CCTTCCACTCTCATCCCCTTGCCTTCTATACTGGCTCTTTTTCCTCGCCG
GTACCAACAGCAAGACGCCATCGCCCTGGAGCTCTTTCTCGAGGACCACA
CCTCCCTCTTTCTTAACTTCCACACCCAGGCCGCCGCGCTCTCCGTGTCG
AAGCACGTCCAGAACCACCACCCTCCCGTCCTGGCTCCTCGCCTTAACTT
GAGCCCCCGTCGGCTCCTGGTGCACGCCAAGACGGCCCATGGCCACTCTC
TGACGCAGGCCTGGGTGCGTCGGGAAATTTCAAATTTCGAATACTTAGCC
TGCGTGAACGCGGCGGCGGGGCGGACTCATAACGATTTGTCGCAATACCC
CGTCTTTCCCTGGATCTTGGCCGACTACACCTCGGAGGTTTTGAATTTGA
ACGACCCGCACACGTTTCGGGATTTGAAATGGCCGATGGGGGCCCAGACC
GAAACGGCCCGTCAACGGCTCCAAGACCGTTACGCGGCCCTTCGGGAGGG
ATACGGAGAGGCGTGCTTCGCGGGTGATAGTGGGTCTTCCCTCCCTCCTT
TCCACCACGGATCCCATTACTCGAATGCAGCGTTTGTCCTCTGGTATCTC
CTCCGCCTGGAACCTTTCACTTCCCTACATCGGGAATTTCACTCGGGACA
TTTCGATTTGCCCGACCGGCAGTTCCGCTCCCTCCGCACCGCTTACCAGG
GTTGTGTGACCAACCCCAACGACGTGAAGGAGCTCATTCCGGAATTCTTT
TGCCTCCCCGAATTCTTGTCGAACGTGAATCGGGTCTCATTGGGCCGGAC
CCAAAGTGGGGACGAAGTCGGGGACGTGGAACTTCCGCCATGGGCCCATG
GGAGTGTGGATGATTTTGTGCGCATGCATCGTGAGGCGTTGGAAAGTGAG
TTTGTCAGCGCTCATCTCCACCACTGGATCGACCTCGTCTTTGGCTATAA
ACAGCGCCCGCCCTTCCTTCCCTCTCCCTCCTCCTCCTCCTCCACCCTGA
GCGCGGCCCTCCGGCCTCGGAGGGAGGGGGAAACGCCCCCCCCTCGCGCC
CGCTGTGGGCGCTTGCAATGA
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Coding sequence (CDS) from alignment at CM002460.1:205839..207559-

>rna2899 ID=rna2899|Name=rna2899|organism=Nannochloropsis gaditana|type=CDS|length=1509bp|location=Sequence derived from alignment at CM002460.1:205839..207559- (Nannochloropsis gaditana)
ATGGCCTCGGACGGGGAGGAGGCGGCAGGCACGGGTACAGGCAGTGATGA
GATGGGAAGGACGGGAGGCGGCCATGCGCGGGGGGCGCGTGTGCGTGCCA
CGATGAAGGCAAGCGTCAGAAGACCCAGGAACGGAGCGATCAGGAGCATG
GTCCCGTTGCCGGAAGATTTCGCGCCATTTCCTATCTTAGCCCCCAGCGT
GACCGACGGGACTGGTGGTAGGACCGACGGGAGCGAGGAGAGGATGATGG
GAAAAGCCCGAGGGGCCGTGTCGCAGGGCTGGCACCCCTGCGAGGTCATT
CGACCCCTGACGGTTACTCCGGGTGTCTGCCAATTGCATGATGGAGGCCT
CTGCTTCCTGCGTCCGGCCCCGCTGCCCTCCCTCCCTTCCACCCTGCGCA
GCCGCAGGCGGAGGCGCGCGGGGCCTTTGCAGAGTTTTCCTTCCACTCTC
ATCCCCTTGCCTTCTATACTGGCTCTTTTTCCTCGCCGGTACCAACAGCA
AGACGCCATCGCCCTGGAGCTCTTTCTCGAGGACCACACCTCCCTCTTTC
TTAACTTCCACACCCAGGCCGCCGCGCTCTCCGTGTCGAAGCACGTCCAG
AACCACCACCCTCCCGTCCTGGCTCCTCGCCTTAACTTGAGCCCCCGTCG
GCTCCTGGTGCACGCCAAGACGGCCCATGGCCACTCTCTGACGCAGGCCT
GGGTGCGTCGGGAAATTTCAAATTTCGAATACTTAGCCTGCGTGAACGCG
GCGGCGGGGCGGACTCATAACGATTTGTCGCAATACCCCGTCTTTCCCTG
GATCTTGGCCGACTACACCTCGGAGGTTTTGAATTTGAACGACCCGCACA
CGTTTCGGGATTTGAAATGGCCGATGGGGGCCCAGACCGAAACGGCCCGT
CAACGGCTCCAAGACCGTTACGCGGCCCTTCGGGAGGGATACGGAGAGGC
GTGCTTCGCGGGTGATAGTGGGTCTTCCCTCCCTCCTTTCCACCACGGAT
CCCATTACTCGAATGCAGCGTTTGTCCTCTGGTATCTCCTCCGCCTGGAA
CCTTTCACTTCCCTACATCGGGAATTTCACTCGGGACATTTCGATTTGCC
CGACCGGCAGTTCCGCTCCCTCCGCACCGCTTACCAGGGTTGTGTGACCA
ACCCCAACGACGTGAAGGAGCTCATTCCGGAATTCTTTTGCCTCCCCGAA
TTCTTGTCGAACGTGAATCGGGTCTCATTGGGCCGGACCCAAAGTGGGGA
CGAAGTCGGGGACGTGGAACTTCCGCCATGGGCCCATGGGAGTGTGGATG
ATTTTGTGCGCATGCATCGTGAGGCGTTGGAAAGTGAGTTTGTCAGCGCT
CATCTCCACCACTGGATCGACCTCGTCTTTGGCTATAAACAGCGCCCGCC
CTTCCTTCCCTCTCCCTCCTCCTCCTCCTCCACCCTGAGCGCGGCCCTCC
GGCCTCGGAGGGAGGGGGAAACGCCCCCCCCTCGCGCCCGCTGTGGGCGC
TTGCAATGA
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Synonyms
Publications