rna2892, rna2892 (mRNA) Nannochloropsis gaditana

Overview
Namerna2892
Unique Namerna2892
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1099
Alignment locationCM002460.1:189924..190847 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101491g1.2447.mrna
Orig protein idgnl|cribi|Naga_101491g1.2447
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:189924..190847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101491g1gene2770Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27788.1cds2884Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2892rna2892-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2892 ID=rna2892|Name=rna2892|organism=Nannochloropsis gaditana|type=mRNA|length=1099bp
TTCCTCCCTCCTCCTCTTTTCCTCCTTCCCACCCTCCTTCCCGCCCTCCT
TCCCGCCCTCCTTCCCGCCCACCTTCCCGCCCTCCCTCCCGCCCTCCTTC
CCGCCTTGGCTGCGTCCATCATTGTTCTCCGTTATTCACACACGACACCC
GCCACTTGCGACACATGCACCCTCGATATCTTCACCCAACGGTCACTACC
ACCCATGCGTGCATCCGTCAATCGACTGGCCCTTCATCTTTCCTTCCCAA
TCCTCTCCCATACCCTCATCATGCATCTGACGACTGTCTCGTCCGACCGC
CCCCCCTTCTCCTCCGTCAATACCTCCCTTCCCCCCCCCTCCCCCCTTCC
CCTGTGCTCTCAATGCCCGTGCCCGTCGCAGACATCCTCTTTGCGCCCTA
CGGCCGGTTGCGTCGGATCAAAGTCTATCGCGACGCCCACGGTAAGCCCA
AAGGCGATGCCCTCGTCACGTATGCCAGGCCAGGATCGACGGCCGCCGCT
ATCAAAAAGCTCAACGGGTATGCCCTCGCCCCCAACCACTGCCTCCGCCT
CAGTCAGGCAGATTTTTCCTACAAGGAGGAAGGTGCCAATGTCCACGAAG
GGATCGGCTTCGACGACCACATGGCCCACCCCGCGCAGGAGGAAGACGAG
CAGGAGGACTACGAGACCCTGCCTCCCGAATGCGAGGCCGATAAATACCC
GGTGGTCATCCTCCGCAACGTGTATGACCCAACGGAAACCGCTGACGAAG
ACTTTGCGGAGCTGGAAACTGATATGCTCCAAGAATGCGTGCGTCATGGG
TGCGTTTTGCATGCGGTGCTGTCCTCTTGTTTTGTTGCATATGACCCCGC
CCTCTGATTTTTTTTGTTTCCTCTCCTAGGGTCCCTTTGCCCTTTTTTTC
CCGCCTTCCCTCCCTCCCCTTACCCTCCTCCATGCGCCCGCCCCCTCTAC
CTCCACCACGATGGTGATGGTCTCGTTTGATGTCACGCGTAACGGTCTCC
ACCGACTCGAGCATTGAAAAGCTTTGTGTGTGAAACCACCCCTTCTTCTT
CCCCCCCTCCCCCTCCCCAAACAAATCAAACCCGCGCTTTGTGGAACAG
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protein sequence of rna2892

>rna2892-protein ID=rna2892-protein|Name=rna2892|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
MILIGLNTPTSPFRPSPSGPRLPIQQTVSMDEHAKAEAIKRARDIIASMG
IKLAQAASPAPLPPPPPAPPFPSPPPPAPAAPPPPTRPPSSPPSFLPTPH
PLPATKPPHPMHRLPPPRPVPLHPRDHRRWPGRRL
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mRNA from alignment at CM002460.1:189924..190847-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2892 ID=rna2892|Name=rna2892|organism=Nannochloropsis gaditana|type=mRNA|length=924bp|location=Sequence derived from alignment at CM002460.1:189924..190847- (Nannochloropsis gaditana)
CGCCGATGACCAGGATGGTATATATAGACGACGACAATATTCCATTTCCT
ACAACTGCGGCCTACACAACCGAAGTGCGTCCGTCAAAATGTGTGAAACC
ACGTGCATAGAACATTATTTAAGCACGGAAGCACCTTTGTGGCGCGTGTA
GTGGTGTGGCATGATACTTATCGGACTGAACACACCAACTTCTCCTTTCA
GGCCTTCCCCCAGTGGGCCGCGTTTACCCATCCAACAGACAGTGTCCATG
GACGAGCACGCGAAAGCCGAAGCCATCAAGCGTGCGCGGGATATCATCGC
GTCCATGGGCATCAAACTCGCGCAGGCAGCGTCACCAGCTCCTCTTCCCC
CCCCTCCTCCCGCCCCTCCCTTCCCCTCCCCTCCGCCACCTGCGCCCGCC
GCCCCCCCCCCTCCCACCCGTCCACCGTCCTCCCCCCCCTCCTTCCTTCC
TACTCCTCATCCTCTGCCAGCAACCAAGCCGCCACACCCGATGCACCGTC
TCCCCCCTCCGCGCCCCGTCCCCCTGCATCCCCGGGATCACAGGCGTTGG
CCTGGCCGGAGGCTGTGAGGGCTAAAATGCAGCAAATACAGGCGAGTTTG
AAGGAAAAATGCGCGCAGGCAAAGGAACAAGGCCTGACATCATGCATTGA
CCAGGTACAGAGGATGGTCAATGGGAAATCAATGAAGAGGCAGGGAGGAG
GGGAGGGATCGGGGCACATCATTACAGAGCAGCTTGAACTCTTTCCTCCT
TCCCTTCCTTCCCCATCCACCCTCACGCCCTATCCTGTGTCCTTTCTCTT
CCTTCCAGACGGAAAGAGACAGGATCGCGAAGGCCAAAGCCCGCAACGTG
GCCTTCCTGCGCCAAAAAATGCAAGAAGAACGGACCCGGAAATATGGCTT
TGACAAAGAAGAGATGGAGGAGGA
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Coding sequence (CDS) from alignment at CM002460.1:189924..190847-

>rna2892 ID=rna2892|Name=rna2892|organism=Nannochloropsis gaditana|type=CDS|length=408bp|location=Sequence derived from alignment at CM002460.1:189924..190847- (Nannochloropsis gaditana)
ATGATACTTATCGGACTGAACACACCAACTTCTCCTTTCAGGCCTTCCCC
CAGTGGGCCGCGTTTACCCATCCAACAGACAGTGTCCATGGACGAGCACG
CGAAAGCCGAAGCCATCAAGCGTGCGCGGGATATCATCGCGTCCATGGGC
ATCAAACTCGCGCAGGCAGCGTCACCAGCTCCTCTTCCCCCCCCTCCTCC
CGCCCCTCCCTTCCCCTCCCCTCCGCCACCTGCGCCCGCCGCCCCCCCCC
CTCCCACCCGTCCACCGTCCTCCCCCCCCTCCTTCCTTCCTACTCCTCAT
CCTCTGCCAGCAACCAAGCCGCCACACCCGATGCACCGTCTCCCCCCTCC
GCGCCCCGTCCCCCTGCATCCCCGGGATCACAGGCGTTGGCCTGGCCGGA
GGCTGTGA
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Synonyms
Publications