Properties
Property Name | Value |
Product | nuclear mrna splicing factor-associated protein |
Orig transcript id | gnl|cribi|Naga_101112g1.4280.mrna |
Orig protein id | gnl|cribi|Naga_101112g1.4280 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:188313..189809 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2891 ID=rna2891|Name=rna2891|organism=Nannochloropsis gaditana|type=mRNA|length=1704bp ATGAAGCCCTCCTCCCCGCCAAATCAACGCATGAGGATAGAAACCGGCCT CGGTACCCCTGACAGGGAGCACGGAGGGAGTGGCATCGTGGGCGCTTGGC CGTGCGGCCTTGGCATACGTAAATCCCTTCTGCTCTTCACCGGCGTTCTT CTCATCTCCGCCGTCTTTATCCTCAACTCAACGCCCCCTTCCCTCCCTCT TCTCCGGCCGCCTCCTCCTCCTCCTGTCGATACCTCCCTCTACACAAACT TCACGACCGCGCTCATCCTCCCGGAGCCCCACGAAGACTGGGTTTCCTTC GAAAGATCCGCGGCCCCACGCTTTTTCACGCACCAGGAACTTTACACTCT TCCCCCTCCCCCGTCCTCGCCGTCCTCCTCCCTCCCCGCCTCTTCCTGCG TCGACAGCGGACTCCCTTCCCATTGTTGTCTCGGAGCTTTCTCTCTGGCC GGTCTCATGGTGTGGGACAGCATCGCGTGCGCCAACGCCAATTTTCTCAG TTATCAACTCCCCCATACCTCGCCCTCCCTCCCGTCCTCGACCTCCCCCG GCGCCTCGGGGTTGGGAAGGTACCGGGACATGGGTGATGTGTTGGGAGGG CTGGGAAACCGGACGTTGACCATATGGGGCGATTCGGTGGCGAGTCAACA TGCGCACGCCATGGAATGTTCGTGGCTTCGGTCGGGGAAGGCGGAGACGG TCCGTTACGAGAAACTTGATTTCAATCGGATCTTCAAGAAGAAGGAGGAA GGGGGCGGTTTCAATCGCGCAGGAACGTATGGCACGAACGCCCTGTACAC GTGGCAAACGCGCCTGCGGGCACGCGGAGGAAGCGAGGGGGAGGGAGGAA AGGAGGTGGAGGAAAAAGGAGTAGAGGGGACGATGAAGCTGTACCTGACG TACCGGCCGTTGTTGAACGAGAGCGCGGGCCTGTTGGCAGAGGCAGACGT GCTAGTCGTCAACTTCGGCCTCCATTACCTCATTGATAAACGGGAGGAAT ACAAGCTGGAAATGAGGGAGATGCTGCGGGCCCTGGCGCCTTTTGGGAGG AACGAGCAGAAGCGATTGATTTGGAGGGAGACGTCAGCCCAGCACCACTT CAACGAGGGCGGGGAGTTTCCGTTGACCATCGACCCGGAACGTTTCGGGG TTTCGCGGAAAGATTACGTGGCGACCATGAACCGGTGTTTTCCCATTCAC TTTGGGCCGTACATCCACCCCCAGTGGCGGGATAAGCTCCTCTTGGCCTT GGCAGCGGAGGAAGGGTGGGAAGTGAGGTTCCTGGACGGGTACGACGGAA GGGGGGGCGATGAGTTTGGAAGGGAGGAGGAGGGAGGAGGGATGGCGGAG CCGCGGGGGCCTCGACGAGGGCAAGGGAGGGGCCAGGGATGCGGTGAGAA GGAAGGTTCGGGCGTGGAGGATGTGAGGTATGTGGAGGGTATGAGGATGG GAGGAGGTAGGGGTGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAG GGGGGGAGGAAGCCGGTCTTGTACTGGCTGCCATTTTATCGCCTGACGAG CGAGCGACTGGATCTGCACCCATACAATGAGTGGAAAGGTAAGTACGACT GCACGCATTACTGCTACACTCCCTTTTTGTGGGATCCTTTAGTGGAAGGG CTGGCGGAGGCGGTGGAGGAGGAAGGAAGGGGGGGATGTGATGGGAAAGT GTGA back to topprotein sequence of rna2891 >rna2891-protein ID=rna2891-protein|Name=rna2891|organism=Nannochloropsis gaditana|type=polypeptide|length=230bp MHPRYLHPTVTTTHACIRQSTGPSSFLPNPLPYPHHASDDCLVRPPPLLL RQYLPSPPLPPSPVLSMPVPVADILFAPYGRLRRIKVYRDAHGKPKGDAL VTYARPGSTAAAIKKLNGYALAPNHCLRLSQADFSYKEEGANVHEGIGFD DHMAHPAQEEDEQEDYETLPPECEADKYPVVILRNVYDPTETADEDFAEL ETDMLQECVRHGCVLHAVLSSCFVAYDPAL back to topmRNA from alignment at CM002460.1:188313..189809- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2891 ID=rna2891|Name=rna2891|organism=Nannochloropsis gaditana|type=mRNA|length=1497bp|location=Sequence derived from alignment at CM002460.1:188313..189809- (Nannochloropsis gaditana) TTCCTCCCTCCTCCTCTTTTCCTCCTTCCCACCCTCCTTCCCGCCCTCCT
TCCCGCCCTCCTTCCCGCCCACCTTCCCGCCCTCCCTCCCGCCCTCCTTC
CCGCCTTGGCTGCGTCCATCATTGTTCTCCGTTATTCACACACGACACCC
GCCACTTGCGACACATGCACCCTCGATATCTTCACCCAACGGTCACTACC
ACCCATGCGTGCATCCGTCAATCGACTGGCCCTTCATCTTTCCTTCCCAA
TCCTCTCCCATACCCTCATCATGCATCTGACGACTGTCTCGTCCGACCGC
CCCCCCTTCTCCTCCGTCAATACCTCCCTTCCCCCCCCCTCCCCCCTTCC
CCTGTGCTCTCAATGCCCGTGCCCGTCGCAGACATCCTCTTTGCGCCCTA
CGGCCGGTTGCGTCGGATCAAAGTCTATCGCGACGCCCACGGTAAGCCCA
AAGGCGATGCCCTCGTCACGTATGCCAGGCCAGGATCGACGGCCGCCGCT
ATCAAAAAGGTCTGTCCTTCCCTCCCTCCCTCCTTCCCTCCTCCTCTTCT
CGCTTCCTAGGCTGCCTGCGGTTGGGAATTTGAAAAGCTCTTTCACCCGG
CGTTACTGGACCGTTTCTCCCCCCCCTCCCCCCCCTCCTTTAGCTCAACG
GGTATGCCCTCGCCCCCAACCACTGCCTCCGCCTCAGTCAGGCAGATTTT
TCCTACAAGGAGGAAGGTGCCAATGTCCACGAAGGGATCGGCTTCGACGA
CCACATGGCCCACCCCGCGCAGGAGGAAGACGAGCAGGAGGACTACGAGA
CCCTGCCTCCCGAATGTAGGTCTTTGTCGGTCTTTCTGGGGGGGGGGGGG
GGCGCGCGTCCGCCCCTTCTCCACCGCCTCGGGTTTTTTTAACGTCGTGG
CTAAATCATGTGTGGGTGTATGGGGGCATTATGATATATAATGGTTCATT
AAAGCTGCGTCCGTCCTCGGCGGGAACCCCCAGCGTCCCCTTGCCTTCGT
CTCGCTTCTTTCTCTCCGCGCCGCCCTCGGTGTTTATTCCCCGCCCCAAT
TCACCCGAAATTCCCCGTCAACGGTCCAGGCGAGGCCGATAAATACCCGG
TGGTCATCCTCCGCAACGTGTATGACCCAACGGAAACCGCTGACGAAGAC
TTTGCGGAGCTGGAAACTGATATGCTCCAAGAATGCGTGCGTCATGGGTG
CGTTTTGCATGCGGTGCTGTCCTCTTGTTTTGTTGCATATGACCCCGCCC
TCTGATTTTTTTTGTTTCCTCTCCTAGGGTCCCTTTGCCCTTTTTTTCCC
GCCTTCCCTCCCTCCCCTTACCCTCCTCCATGCGCCCGCCCCCTCTACCT
CCACCACGATGGTGATGGTCTCGTTTGATGTCACGCGTAACGGTCTCCAC
CGACTCGAGCATTGAAAAGCTTTGTGTGTGAAACCACCCCTTCTTCTTCC
CCCCCTCCCCCTCCCCAAACAAATCAAACCCGCGCTTTGTGGAACAG back to topCoding sequence (CDS) from alignment at CM002460.1:188313..189809- >rna2891 ID=rna2891|Name=rna2891|organism=Nannochloropsis gaditana|type=CDS|length=2079bp|location=Sequence derived from alignment at CM002460.1:188313..189809- (Nannochloropsis gaditana) GCGAGGCCGATAAATACCCGGTGGTCATCCTCCGCAACGTGTATGACCCA ACGGAAACCGCTGACGAAGACTTTGCGGAGCTGGAAACTGATATGCTCCA AGAATGCGTGCGTCATGGGTGCGTTTTGCATGCGGTGCTGTCCTCTTGTT TTGTTGCATATGACCCCGCCCTCTGACTCAACGGGTATGCCCTCGCCCCC AACCACTGCCTCCGCCTCAGTCAGGCAGATTTTTCCTACAAGGAGGAAGG TGCCAATGTCCACGAAGGGATCGGCTTCGACGACCACATGGCCCACCCCG CGCAGGAGGAAGACGAGCAGGAGGACTACGAGACCCTGCCTCCCGAATAT GCACCCTCGATATCTTCACCCAACGGTCACTACCACCCATGCGTGCATCC GTCAATCGACTGGCCCTTCATCTTTCCTTCCCAATCCTCTCCCATACCCT CATCATGCATCTGACGACTGTCTCGTCCGACCGCCCCCCCTTCTCCTCCG TCAATACCTCCCTTCCCCCCCCCTCCCCCCTTCCCCTGTGCTCTCAATGC CCGTGCCCGTCGCAGACATCCTCTTTGCGCCCTACGGCCGGTTGCGTCGG ATCAAAGTCTATCGCGACGCCCACGGTAAGCCCAAAGGCGATGCCCTCGT CACGTATGCCAGGCCAGGATCGACGGCCGCCGCTATCAAAAAGGCGAGGC CGATAAATACCCGGTGGTCATCCTCCGCAACGTGTATGACCCAACGGAAA CCGCTGACGAAGACTTTGCGGAGCTGGAAACTGATATGCTCCAAGAATGC GTGCGTCATGGGTGCGTTTTGCATGCGGTGCTGTCCTCTTGTTTTGTTGC ATATGACCCCGCCCTCTGACTCAACGGGTATGCCCTCGCCCCCAACCACT GCCTCCGCCTCAGTCAGGCAGATTTTTCCTACAAGGAGGAAGGTGCCAAT GTCCACGAAGGGATCGGCTTCGACGACCACATGGCCCACCCCGCGCAGGA GGAAGACGAGCAGGAGGACTACGAGACCCTGCCTCCCGAATATGCACCCT CGATATCTTCACCCAACGGTCACTACCACCCATGCGTGCATCCGTCAATC GACTGGCCCTTCATCTTTCCTTCCCAATCCTCTCCCATACCCTCATCATG CATCTGACGACTGTCTCGTCCGACCGCCCCCCCTTCTCCTCCGTCAATAC CTCCCTTCCCCCCCCCTCCCCCCTTCCCCTGTGCTCTCAATGCCCGTGCC CGTCGCAGACATCCTCTTTGCGCCCTACGGCCGGTTGCGTCGGATCAAAG TCTATCGCGACGCCCACGGTAAGCCCAAAGGCGATGCCCTCGTCACGTAT GCCAGGCCAGGATCGACGGCCGCCGCTATCAAAAAGGCGAGGCCGATAAA TACCCGGTGGTCATCCTCCGCAACGTGTATGACCCAACGGAAACCGCTGA CGAAGACTTTGCGGAGCTGGAAACTGATATGCTCCAAGAATGCGTGCGTC ATGGGTGCGTTTTGCATGCGGTGCTGTCCTCTTGTTTTGTTGCATATGAC CCCGCCCTCTGACTCAACGGGTATGCCCTCGCCCCCAACCACTGCCTCCG CCTCAGTCAGGCAGATTTTTCCTACAAGGAGGAAGGTGCCAATGTCCACG AAGGGATCGGCTTCGACGACCACATGGCCCACCCCGCGCAGGAGGAAGAC GAGCAGGAGGACTACGAGACCCTGCCTCCCGAATATGCACCCTCGATATC TTCACCCAACGGTCACTACCACCCATGCGTGCATCCGTCAATCGACTGGC CCTTCATCTTTCCTTCCCAATCCTCTCCCATACCCTCATCATGCATCTGA CGACTGTCTCGTCCGACCGCCCCCCCTTCTCCTCCGTCAATACCTCCCTT CCCCCCCCCTCCCCCCTTCCCCTGTGCTCTCAATGCCCGTGCCCGTCGCA GACATCCTCTTTGCGCCCTACGGCCGGTTGCGTCGGATCAAAGTCTATCG CGACGCCCACGGTAAGCCCAAAGGCGATGCCCTCGTCACGTATGCCAGGC CAGGATCGACGGCCGCCGCTATCAAAAAG back to top
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