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Properties
| Property Name | Value |
|---|
| Product | mitogen-activated protein kinase |
| Orig transcript id | gnl|cribi|Naga_100324g3.672.mrna |
| Orig protein id | gnl|cribi|Naga_100324g3.672 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:176991..178637 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2888 ID=rna2888|Name=rna2888|organism=Nannochloropsis gaditana|type=mRNA|length=3097bp
CCCATCGTCTTCTTCCCCGCCCCAGGGGCCAGCCCGAAAGGCTGGCAATG
CCGCCGTTCCCCCCTCCTCGTCCTCTCCCCGTTATCACCCTCGTCTCCTC
CTGGCCAGCGGTGGGTACCGAGAGCCGTCCCGTCGGGAATCTTTTTCGGA
GGAGCTCCGACAGTTCTTGGGGGAGAACGTGACCCATCTCCTCTTCATCC
CCTACGGGGTGCGAGACTACGACGCTTGTCTGAACATGCACGTGGACTCG
GGCATGACGGGGGGGTACAGATTACAGCCATTGCACAAAGAGGACGACCC
GGCGGTGGCGATTCGAGGGGCGCAAGCCATCTACGTGTGCGGTGGTAACG
TCTTCCGCCTCCTCCGTGAGCTCCGCCGCCGCAACCTCCTCCAACCCCTC
CAGGACGCCGTCCTTTCCCACCGCGTGCCCTACGTCGGCATCTCGGCGGG
CACCGTCCTAGCCTGTCCCACCGTGTGCACCAGCAACGACATGCCCGTGG
TGGACCCCGGCGACTACTCGACCTCCGCCGGCTCCTCCCTTCAGGCCTTG
GGCCTCGTGAAATTTCAGATCAATGCCCATTATTACGGCGGTGAATTTTA
CAGCCGGGAGCCAGGGACCGGCGCGTACGAGGCGCACGCCGGGATGCGTC
GGGAGGAACGGATTCAAGAGTTTCTAGAAGAAACGAGCGAGGCGGCGCCG
GTTCCAGTCTTGGGTCTCCCCGAAGGTTACCTCCTTCGATGCGAAGGCGA
GAAAATCGGGGTCCGTGGAGGTCCCAGTACCCGCGGCAGTGCCGTCACCA
TCTTCAAGAAAGACCAATCCCCCCTGGAGGTGGAAGGGTTGCCGACGGAG
GACATCGCAGCTTTGGTCTGGGGACAAGCCAAGCCGTCCACTCGGACGCC
GGGAGGGATGGTGCCACTCCATGTCCTGTTCGGAAACCCGGTCAGGAGCC
AAGCGCGGCTCTCCCCCGACGGTATCTACCTGTCGTTCTTGGCCCCCGAC
CCCACCACGGACGTGTTGAATGTCTGGGTAGTCGAGCGTGCAGCAGGAGT
CGTGTCCCGCACGGCCCGCATGGTCACCTCCGACCACAACCGGGGCATAC
GCCAGCATTTTTGGGCGGAAAATTCCCGGGAAATTTTATATTTGCAGGAC
GTGGGTGGCGACGAAAATTGGCATCTATTTTCGGTCCCTCTCTCGCCGGG
GGAAGCCGCCGACGCCCGCTCGGGCCGTGTGCCGGTGCGGGATTTGACCC
CATTTGAGGGGGTACGGGCGGAGAATGTGAGGCGAAGCCCGCGCCACCCC
GATGAATTGCTGGTTGGTTTGAATTTGCGATCCCGCGTCGTCTTTGACGT
GTATCGGGTGTCGCTGGCCACTGGGTCCTGCGTCCTTGATACGGAAAATC
CTGGGGACGTGCTGGCCTGGTACACCGATAAGGATTTCGAGGTGCGCGGT
GCCTTTGCCGCCGACGCCGCCGAGGGGGGACGCCGGCTGCGGGTCCGGGA
CAAGGGGAAAGCGGCCTGGCGGGAGATTCTTGCCTGGGATTTCGAGGAGA
CGAGTGAGGTCGTTGGGTTCAACCCCGACGGCGACGGGATCTACATCTTG
ACGTCCGTCGGATCGGATACCACTCGTTTGGTCGAAATCGACTGCGCGGA
TGGGCAGGAGCGCCGGACCTGGTTGCATGACCCTCGGTGCGATGTGGGTC
AAGTCCTGATCAACAAGGAGACATTGGCACTGGAGGCGGCGGAGCTCAAT
TATTTGACGCGGGAGTGGCGGTGCTTGGAAGAAGGGGAACAAAGCGCAGG
GACGCGGTCGGTGGCCCGAGATTTTGCGGCCATCGAGGCAGCCGTGCGCC
GACAAGCGGGGGGACGGCGGGATTTCCGAGTCGTTTCCCGGGCGCACAAG
GATGCTCTCTGGGTCGTGGCGGTCTCGGGCGACACCGTGCCCACCGAATT
TTTCCTGTACTACCGCGCCACCCAGGCCTTGGATTTATTGTTCGTGGACC
GGCCCCAGCTGCTGGAATATTCGCTCGGGCGCATGCAACCCCTGGTCATC
TCTGCGTCGGATGGTGAAGAATTGGTCTCTTACCTGACCCTCCCCCCCGC
CCTCCCCCCCTGGACCCCGGGAGCGGAGTCTCCTCCCCTTCATCTGCCCC
TGGTGCTCCTCGTCCACGGAGGGCCATGGGCCCGGGACTCGTGGGGATTC
AGCCCCGTTGTCCAGTTGCTTGCCAGCAGGGGCTATGCCGTCCTTCAAGT
CAATTACCGGGGCAGTGCCGGCTTTGGCAAGAGCTTTGTGAACAAGGGCA
ATGGGGAGTGGGGGATTGGAAGCATGCAACGCGACTTGACGGAGAGCGTC
CGGTGGGCGGTGCAGGCAGGGGTGGCGGACCCGGCGCGCGTCGCCATCAT
GGGCGGGAGCTACGGTGGGTATGCGACCTTGGCCGGTTTATGTTTCACGC
CGGAATTGTACAAATGCGGCGTGGATATTGTCGGGCCGGCGCATTTAAAG
ACCCTTTTCGGCAGCATTCCGCCGTACTGGGCCCCGATGAAACGACAACT
GGTCAAACGCGTGGGCAACGTGGAGGAGGAAGAGGTATTCAACCGGAAGA
TTTCCCCGGTCTATCACGCCAAACGCATCCGCGCCCCTTTGATGATAGTC
CAAGGGGCCAACGATCCCAGGGTCAAGAAAGCCGAATCGGATCAAATGGT
GGCCAGTATGCGAGCGGAGGGGTTGGAAGTTGTTTATCTAGTTTACCCGG
ATGAAGGTCATGGCCTGGTGCGCCCCCCGAACAAGATGGACATGTACCAT
CGGATTGAGGCCTTTTTGAAGAAGCACATGGGGGGGAAAATGTTTGCAAG
TCGGGAGGACAAAGCACTTTTTGACGGCACGTCCGCCCTGATTGAGTAAG
ACAAGCATTTGACAGGGTATAGAAAGGAAAAATGGACGTATAGGAAAGGA
ATGAATTGATAAGCCAATAAGTTCAAAATTTATAAATTTTAGAACTATCA
TCTAGAGAAGCTGTATAGTCCGATTATATGGCATCTCTGCTGCTTGATAA
ATTGTTATGGGCAGATGGACCAAAACAAATCTTGCTCCCGTTGTTCA back to topprotein sequence of rna2888 >rna2888-protein ID=rna2888-protein|Name=rna2888|organism=Nannochloropsis gaditana|type=polypeptide|length=369bp
MAPIHQASRVPPPSLPTKVRRKLVGHRGPIYTIRFNEKGTYCMTGGQDKS
IKLWNPFRPSADANKAGEAMLVQTFTGPHGYEIRDVAITTDNARFASCGG
DTAFYLWDVATARVVKKFSGHAHMINSVAFNAEGTVVLSGSYDRTVKIWD
LRSNNRDPIQTLDDFKDSVTRVMVLEEGGRAGKGAGGKEVLATSVDGCLR
TYDIRKGVMWMDDCKEPLSSVTVSGDGQCVLMNGLDGVVRLLERSTGEML
NNYQGYDCWQEASGKVVAIANPPFTSILPTHVRHTHQAYPIESCFDNTDA
FVLSGSEDGSLYVWDLVEGGSEGGKEGKPVAVLKEHKRALGSMSFHPSEA
VLVTAGYDGVGCCWFRETR back to topmRNA from alignment at CM002460.1:176991..178637+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2888 ID=rna2888|Name=rna2888|organism=Nannochloropsis gaditana|type=mRNA|length=1647bp|location=Sequence derived from alignment at CM002460.1:176991..178637+ (Nannochloropsis gaditana)
ATGGCCCCTATCCACCAAGCATCACGCGTTCCACCGCCTTCGTTACCCAC
TAAAGTCCGCCGTAAGCTTGTTGGCCACCGCGGCCCTATCTACACAATCC
GGTTCAATGGTAAGGCGGCTTCCATGTGTTTTTCCCTTTCACGCCACAAG
GAGATATTGGAGCGATGGGaagagggcatggaggagtgCGCACGATAAGA
TCCTGCTTCTGATCCGATAAAGGCCGGTCGTGCGGGGTTTTAAACGCCCG
TGTTGTTTCCTCTACGAGGAAGCCGTCTTGAAATGCTCAtggccttctcc
cttctgccAGAAAAAGGCACCTATTGTATGACTGGAGGGCAGGACAAAAG
CATCAAGCTCTGGAACCCCTTTCGCCCCAGCGCCGACGCCAACAAAGCAG
GTGGAGAGCCCTTTCCCTACTTGGAAGGACAGctccccagcccctccctt
gatgccctccctcccgtcctccctcccttctttccctccctccttctttc
cctccctccttctctctttccctccttcttaccctccctcttcttgatAC
CaacactccctccctccctccccgcaaACCACTTCAGGAGAAGCCATGCT
CGTCCAGACCTTCACGGGCCCCCACGGCTACGAAATCCGCGATGTGGCGA
TAACCACCGACAATGCCCGGTTCGCCTCGTGCGGGGGCGACACCGCCTTT
TACCTGTGGGACGTGGCTACGGCTCGGGTCGTAAAGAAATTCAGTGGACA
CGCGCACATGATCAACAGCGTAGCGTTCAACGCGGAGGGTACCGTCGTCC
TGAGCGGGTCCTATGATCGGACAGGTAGTGCCTGGATTCCATATCCTTGT
CaaacccccccaaaaaataaaTTTTATGATAGGATTCGACCTCAGACGAG
ACGAGTACAGCTGATGAGTGGGTAGTGATTTTTAACTCACAGATTATATC
GCTCCATCCGGGTGCTCGTACAGTCAAAATCTGGGACCTGCGAAGCAATA
ATCGAGACCCCATTCAGACGTTGGACGACTTCAAGGACAGCGTGACGCGT
GTGATGGttttggaagaggggggtagggcggggaagggggcgggagggaa
ggaggtgctggccacTTCTGTGGATGGGTGTCTGCGCACGTATGATATAC
GGAAAGGGGTGATGTGGATGGACGATTGCAAGGAGCCCCTATCTTCGGTG
ACCGTTTCCGGGGACGGACAATGCGTGCTGATGAACGGTTTGGACGGTGT
CGTCCGTTTGTTGGAGAGAAGCACGGGCGAGATGCTGAACAATTATCAAG
GGTACGATTGTTGGCAGGAGGCATCTGGGAAGGTAGTGGCGATAGCTAAT
CCACCTTTcacttccatcctccctacACACGTCAGACACACCCACCAGGC
CTACCCCATTGAATCGTGCTTCGACAATACGGACGCTTTTGTGCTGTCAG
GCTCGGAGGACGGCTCTCTCTATGTATGGGATttggtagagggagggagc
gagggagggaaagaggggaagccgGTCGCTGTCCTGAAAGAGCACAAACG
GGCCTTAGGTTCCATGTCTTTCCACCCGTCCGAAGCTGTCCTTGTCACAG
CAGGATACGATGGTGTAGGCTGCTGTTGGTTCAGGGAGACGCGATGA back to topCoding sequence (CDS) from alignment at CM002460.1:176991..178637+ >rna2888 ID=rna2888|Name=rna2888|organism=Nannochloropsis gaditana|type=CDS|length=4440bp|location=Sequence derived from alignment at CM002460.1:176991..178637+ (Nannochloropsis gaditana)
ATGGCCCCTATCCACCAAGCATCACGCGTTCCACCGCCTTCGTTACCCAC
TAAAGTCCGCCGTAAGCTTGTTGGCCACCGCGGCCCTATCTACACAATCC
GGTTCAATGAAAAAGGCACCTATTGTATGACTGGAGGGCAGGACAAAAGC
ATCAAGCTCTGGAACCCCTTTCGCCCCAGCGCCGACGCCAACAAAGCAGG
AGAAGCCATGCTCGTCCAGACCTTCACGGGCCCCCACGGCTACGAAATCC
GCGATGTGGCGATAACCACCGACAATGCCCGGTTCGCCTCGTGCGGGGGC
GACACCGCCTTTTACCTGTGGGACGTGGCTACGGCTCGGGTCGTAAAGAA
ATTCAGTGGACACGCGCACATGATCAACAGCGTAGCGTTCAACGCGGAGG
GTACCGTCGTCCTGAGCGGGTCCTATGATCGGACAGTCAAAATCTGGGAC
CTGCGAAGCAATAATCGAGACCCCATTCAGACGTTGGACGACTTCAAGGA
CAGCGTGACGCGTGTGATGGttttggaagaggggggtagggcggggaagg
gggcgggagggaaggaggtgctggccacTTCTGTGGATGGGTGTCTGCGC
ACGTATGATATACGGAAAGGGGTGATGTGGATGGACGATTGCAAGGAGCC
CCTATCTTCGGTGACCGTTTCCGGGGACGGACAATGCGTGCTGATGAACG
GTTTGGACGGTGTCGTCCGTTTGTTGGAGAGAAGCACGGGCGAGATGCTG
AACAATTATCAAGGGTACGATTGTTGGCAGGAGGCATCTGGGAAGGTAGT
GGCGATAGCTAATCCACCTTTcacttccatcctccctacACACGTCAGAC
ACACCCACCAGGCCTACCCCATTGAATCGTGCTTCGACAATACGGACGCT
TTTGTGCTGTCAGGCTCGGAGGACGGCTCTCTCTATGTATGGGATttggt
agagggagggagcgagggagggaaagaggggaagccgGTCGCTGTCCTGA
AAGAGCACAAACGGGCCTTAGGTTCCATGTCTTTCCACCCGTCCGAAGCT
GTCCTTGTCACAGCAGGATACGATGGTGTAGGCTGCTGTTGGTTCAGGGA
GACGCGATGAATGGCCCCTATCCACCAAGCATCACGCGTTCCACCGCCTT
CGTTACCCACTAAAGTCCGCCGTAAGCTTGTTGGCCACCGCGGCCCTATC
TACACAATCCGGTTCAATGAAAAAGGCACCTATTGTATGACTGGAGGGCA
GGACAAAAGCATCAAGCTCTGGAACCCCTTTCGCCCCAGCGCCGACGCCA
ACAAAGCAGGAGAAGCCATGCTCGTCCAGACCTTCACGGGCCCCCACGGC
TACGAAATCCGCGATGTGGCGATAACCACCGACAATGCCCGGTTCGCCTC
GTGCGGGGGCGACACCGCCTTTTACCTGTGGGACGTGGCTACGGCTCGGG
TCGTAAAGAAATTCAGTGGACACGCGCACATGATCAACAGCGTAGCGTTC
AACGCGGAGGGTACCGTCGTCCTGAGCGGGTCCTATGATCGGACAGTCAA
AATCTGGGACCTGCGAAGCAATAATCGAGACCCCATTCAGACGTTGGACG
ACTTCAAGGACAGCGTGACGCGTGTGATGGttttggaagaggggggtagg
gcggggaagggggcgggagggaaggaggtgctggccacTTCTGTGGATGG
GTGTCTGCGCACGTATGATATACGGAAAGGGGTGATGTGGATGGACGATT
GCAAGGAGCCCCTATCTTCGGTGACCGTTTCCGGGGACGGACAATGCGTG
CTGATGAACGGTTTGGACGGTGTCGTCCGTTTGTTGGAGAGAAGCACGGG
CGAGATGCTGAACAATTATCAAGGGTACGATTGTTGGCAGGAGGCATCTG
GGAAGGTAGTGGCGATAGCTAATCCACCTTTcacttccatcctccctacA
CACGTCAGACACACCCACCAGGCCTACCCCATTGAATCGTGCTTCGACAA
TACGGACGCTTTTGTGCTGTCAGGCTCGGAGGACGGCTCTCTCTATGTAT
GGGATttggtagagggagggagcgagggagggaaagaggggaagccgGTC
GCTGTCCTGAAAGAGCACAAACGGGCCTTAGGTTCCATGTCTTTCCACCC
GTCCGAAGCTGTCCTTGTCACAGCAGGATACGATGGTGTAGGCTGCTGTT
GGTTCAGGGAGACGCGATGAATGGCCCCTATCCACCAAGCATCACGCGTT
CCACCGCCTTCGTTACCCACTAAAGTCCGCCGTAAGCTTGTTGGCCACCG
CGGCCCTATCTACACAATCCGGTTCAATGAAAAAGGCACCTATTGTATGA
CTGGAGGGCAGGACAAAAGCATCAAGCTCTGGAACCCCTTTCGCCCCAGC
GCCGACGCCAACAAAGCAGGAGAAGCCATGCTCGTCCAGACCTTCACGGG
CCCCCACGGCTACGAAATCCGCGATGTGGCGATAACCACCGACAATGCCC
GGTTCGCCTCGTGCGGGGGCGACACCGCCTTTTACCTGTGGGACGTGGCT
ACGGCTCGGGTCGTAAAGAAATTCAGTGGACACGCGCACATGATCAACAG
CGTAGCGTTCAACGCGGAGGGTACCGTCGTCCTGAGCGGGTCCTATGATC
GGACAGTCAAAATCTGGGACCTGCGAAGCAATAATCGAGACCCCATTCAG
ACGTTGGACGACTTCAAGGACAGCGTGACGCGTGTGATGGttttggaaga
ggggggtagggcggggaagggggcgggagggaaggaggtgctggccacTT
CTGTGGATGGGTGTCTGCGCACGTATGATATACGGAAAGGGGTGATGTGG
ATGGACGATTGCAAGGAGCCCCTATCTTCGGTGACCGTTTCCGGGGACGG
ACAATGCGTGCTGATGAACGGTTTGGACGGTGTCGTCCGTTTGTTGGAGA
GAAGCACGGGCGAGATGCTGAACAATTATCAAGGGTACGATTGTTGGCAG
GAGGCATCTGGGAAGGTAGTGGCGATAGCTAATCCACCTTTcacttccat
cctccctacACACGTCAGACACACCCACCAGGCCTACCCCATTGAATCGT
GCTTCGACAATACGGACGCTTTTGTGCTGTCAGGCTCGGAGGACGGCTCT
CTCTATGTATGGGATttggtagagggagggagcgagggagggaaagaggg
gaagccgGTCGCTGTCCTGAAAGAGCACAAACGGGCCTTAGGTTCCATGT
CTTTCCACCCGTCCGAAGCTGTCCTTGTCACAGCAGGATACGATGGTGTA
GGCTGCTGTTGGTTCAGGGAGACGCGATGAATGGCCCCTATCCACCAAGC
ATCACGCGTTCCACCGCCTTCGTTACCCACTAAAGTCCGCCGTAAGCTTG
TTGGCCACCGCGGCCCTATCTACACAATCCGGTTCAATGAAAAAGGCACC
TATTGTATGACTGGAGGGCAGGACAAAAGCATCAAGCTCTGGAACCCCTT
TCGCCCCAGCGCCGACGCCAACAAAGCAGGAGAAGCCATGCTCGTCCAGA
CCTTCACGGGCCCCCACGGCTACGAAATCCGCGATGTGGCGATAACCACC
GACAATGCCCGGTTCGCCTCGTGCGGGGGCGACACCGCCTTTTACCTGTG
GGACGTGGCTACGGCTCGGGTCGTAAAGAAATTCAGTGGACACGCGCACA
TGATCAACAGCGTAGCGTTCAACGCGGAGGGTACCGTCGTCCTGAGCGGG
TCCTATGATCGGACAGTCAAAATCTGGGACCTGCGAAGCAATAATCGAGA
CCCCATTCAGACGTTGGACGACTTCAAGGACAGCGTGACGCGTGTGATGG
ttttggaagaggggggtagggcggggaagggggcgggagggaaggaggtg
ctggccacTTCTGTGGATGGGTGTCTGCGCACGTATGATATACGGAAAGG
GGTGATGTGGATGGACGATTGCAAGGAGCCCCTATCTTCGGTGACCGTTT
CCGGGGACGGACAATGCGTGCTGATGAACGGTTTGGACGGTGTCGTCCGT
TTGTTGGAGAGAAGCACGGGCGAGATGCTGAACAATTATCAAGGGTACGA
TTGTTGGCAGGAGGCATCTGGGAAGGTAGTGGCGATAGCTAATCCACCTT
TcacttccatcctccctacACACGTCAGACACACCCACCAGGCCTACCCC
ATTGAATCGTGCTTCGACAATACGGACGCTTTTGTGCTGTCAGGCTCGGA
GGACGGCTCTCTCTATGTATGGGATttggtagagggagggagcgagggag
ggaaagaggggaagccgGTCGCTGTCCTGAAAGAGCACAAACGGGCCTTA
GGTTCCATGTCTTTCCACCCGTCCGAAGCTGTCCTTGTCACAGCAGGATA
CGATGGTGTAGGCTGCTGTTGGTTCAGGGAGACGCGATGA back to top
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