rna285, rna285 (mRNA) Nannochloropsis gaditana

Overview
Namerna285
Unique Namerna285
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1271
Alignment locationCM002455.1:712228..713430 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100026g31.10661.mrna
Orig protein idgnl|cribi|Naga_100026g31.10661
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:712228..713430 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100026g31gene274Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna285rna285-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30407.1cds285Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna285 ID=rna285|Name=rna285|organism=Nannochloropsis gaditana|type=mRNA|length=1271bp
TGTCATTCAGGGAGAAATGATGACATGTGTGGGACGGTCTTTACATGGGA
AGAGGGCATGAAAATAACATGGCCTGGCGGGATGGAGCGTCACACCTGTG
TATGCGTTCGATCCACAAGCAACTCACCATTTGCGTCGGGGCCTGTCTCC
AATCTGCTTTAGGCTACTTTTCTCTAATTTAGCCTATTCTATACAGACAG
AGACACACAGGGATCATGGGAGACTCATGGGAAGATGACGACTTCACCCC
AGTGGTGCCTCAAGCAGTGGTGCTGCCAACCAAGACATCCTGGGACGATG
AGGATCTGCCAGAGGACCCTAACGCGGGCAAGACACCGGAGGAAATCGCA
GCCGAGGCCGAGCGGCGGAGAAAGGCGGAAGAGGCTCGACAGGCGAGGGC
ACGAAAAAATGCGGAGCGAGCAGAATTGCGGCGGCAGGCGGAAGAGGAAG
CGGAGCGGATGGCCAAAGAGACACCGGAGGAGCGCGCCCTGCGGGAGCGC
CAGGCTGTGGAGAAGGCGGACTACGCCATGGCCGACGAGCTCTTCGGCCC
CCCCGGCCAGCCCAGCAGTCGGCCCTTGTCCTCCCTCTCTCTCTCTTCCT
CTGCCTCCTCCGTGGGCGCAGGCAAGGTGAGCGAGAGGGCCCGAGGCCCC
GGCATGAGCGTGAAGGCCGCGCTGTGTGCTCAACTCCCCTTCCCCCTCCC
CAGGCGCCCAACGCACCGACAGTCCTCAAAGCTCCCGGGGACTTCACGGC
CCTGGCCAAGAGCCTGGGTCCTCAATTCAAGAAGGCGGCCAGCAGCAAGG
ACGTGACCGGCTTTGTATTGGAGCTGTTGGCCCGCGGGGGGAAGGATCCT
GTGGGGGTGGAGGACTTGAATGAGCTGATCAAAGGTCTGCAGGCGCTGGC
CGTGGAGAAGCAACGGCTTGCGGACGCGAACCGCAATAAGATCGGGGCGA
AGCAGAAGGCGCTGGCGGCGAAGAAGAAGGAGCACAAGGCAAAGAGCGCG
CAGCACAAGGAGGTGTTCGGCGCCGACTTCGACGAGGACGACCCCGACAT
GGACCAGTACTACGCCATGGAGGACGAGTTCATGTAAGGGCACTGTAACC
CCGGTTCCGCTCGACGAAGGCTGGGAGCGCCCTTTCGGTGGGATAAAATG
GATGCTTTACCGCTGCGCTTCGGCTGAGGAAGAGAGAAATGCGAGCGGGG
ATCGGGGTCCTACAAACGAAGAAAGGAGAACAAGTTCCTGGCCAAAGAAA
AACAAGACAAATACCCTCTCC
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protein sequence of rna285

>rna285-protein ID=rna285-protein|Name=rna285|organism=Nannochloropsis gaditana|type=polypeptide|length=309bp
MPATPEEIQEKLSKDLNDLITPEDEAPGDRHHRNGPRREDRGGRAFRGWQ
VPGDGFGHEGPVLDFGHPSAFAPPPLMHRMPPGFVEYRNAALPGGRGGHP
WQDGGPRRPPAQPGQQFVVRSAPGARKPGSVRLFYVWSADGKELRVEHQH
QELLLITAAGTLRLNAGGRPRSRETLLGLNVVVSLLGMEVVQEEGAEEGQ
AQGSWKVRKGSWSQAFAEGMTVSAFASREWPKIQALLTRLPRDVTREDIV
LVPPPPVPTGPALLGKREAVEGGGAGAVRGGRGRGRGRGVNLWAGSNKWV
RTEDAGNVC
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mRNA from alignment at CM002455.1:712228..713430-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna285 ID=rna285|Name=rna285|organism=Nannochloropsis gaditana|type=mRNA|length=1203bp|location=Sequence derived from alignment at CM002455.1:712228..713430- (Nannochloropsis gaditana)
ATGCCAGCGACACCAGAGGAGATTCAAGAAAAGCTGAGTAAAGACCTGAA
TGATTTGATCACTCCAGAGGATGAGGCGCCGGGAGACAGGCATCATCGCA
ATGGTCCCCGTCGAGAAGATAGAGGCGGCCGTGCGTTTCGAGGTGCTGGG
CGAGGAAGGGAGGGGGGCCGAGGGAATGCTCAGCCATTCATTCGAGAAGG
AATTGGGAGAGGAAGAAGAATGAGGGGCTCTTTTGGCCGTGGCACCGGCG
GTCGAGGAGGAGATCCCCCTTTTTCTTACACTGTCGTGGGGGGACCAGGC
TGGCAGGTGCCGGGGGATGGATTCGGGCATGAAGGTCCTGTACTTGATTT
CGGGCACCCCTCTGCCTTTGCACCCCCTCCCCTCATGCATCGTATGCCGC
CCGGATTTGTGGAGTACAGGAACGCCGCTCTTCCCGGCGGACGAGGGGGG
CACCCCTGGCAGGACGGGGGCCCTCGGCGGCCTCCAGCCCAGCCAGGGCA
GCAGTTTGTCGTGCGGTCGGCGCCGGGAGCCCGAAAACCCGGCAGTGTCA
GGTTATTCTACGTGTGGTCGGCAGACGGGAAGGAGCTGCGTGTGGAGCAT
CAGCATCAAGAGCTGCTCCTCATCACGGCGGCGGGGACTTTGAGGCTCAA
TGCGGGGGGGCGACCCCGGTCCAGAGAAACCCTGCTGGGTCTGAATGTGG
TGGTGTCTCTGTTGGGGATGGAAGTAGTGCAGGAGGAAGGGGCAGAGGAG
GGGCAAGCTCAGGGGTCGTGGAAGGTCCGGAAGGGCAGCTGGTCGCAGGC
ATTCGCGGAGGGCATGACGGTCTCAGCCTTCGCCTCGCGGGAGTGGCCCA
AGATCCAGGCGCTTTTGACCAGACTCCCGCGAGACGTGACGCGCGAGGAC
ATCGTCTTGGTCCCGCCACCACCTGTCCCGACGGGCCCGGCTCTGCTCGG
AAAGCGCGAGGCAGTGGAGGGGGGGGGGGCGGGGGCTGTCCGGGGGGGCC
GCGGGAGGGGGAGAGGGCGGGGCGTGAATCTGTGGGCGGGGTCGAACAAG
TGGGTGCGGACGGAGGACGCGGGTAATGTTTGCTAGGGTTGCTCGGATGG
GGGGGGCGGGGAGCGATGGAGGGAGGAAGATCAGGTAAGGTCTCGACAGA
CTAGAGAAGCACGAGTGCAGGTATAAGAAACAGCAAAAAAAAGTAATGGG
CCC
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Coding sequence (CDS) from alignment at CM002455.1:712228..713430-

>rna285 ID=rna285|Name=rna285|organism=Nannochloropsis gaditana|type=CDS|length=1860bp|location=Sequence derived from alignment at CM002455.1:712228..713430- (Nannochloropsis gaditana)
GCTGGCAGGTGCCGGGGGATGGATTCGGGCATGAAGGTCCTGTACTTGAT
TTCGGGCACCCCTCTGCCTTTGCACCCCCTCCCCTCATGCATCGTATGCC
GCCCGGATTTGTGGAGTACAGGAACGCCGCTCTTCCCGGCGGACGAGGGG
GGCACCCCTGGCAGGACGGGGGCCCTCGGCGGCCTCCAGCCCAGCCAGGG
CAGCAGTTTGTCGTGCGGTCGGCGCCGGGAGCCCGAAAACCCGGCAGTGT
CAGGTTATTCTACGTGTGGTCGGCAGACGGGAAGGAGCTGCGTGTGGAGC
ATCAGCATCAAGAGCTGCTCCTCATCACGGCGGCGGGGACTTTGAGGCTC
AATGCGGGGGGGCGACCCCGGTCCAGAGAAACCCTGCTGGGTCTGAATGT
GGTGGTGTCTCTGTTGGGGATGGAAGTAGTGCAGGAGGAAGGGGCAGAGG
AGGGGCAAGCTCAGGGGTCGTGGAAGGTCCGGAAGGGCAGCTGGTCGCAG
GCATTCGCGGAGGGCATGACGGTCTCAGCCTTCGCCTCGCGGGAGTGGCC
CAAGATCCAGGCGCTTTTGACCAGACTCCCGCGAGACGTGACGCGCGAGG
ACATCGTCTTGGTCCCGCCACCACCTGTCCCGACGGGCCCGGCTCTGCTC
GGAAAGCGCGAGGCAGTGGAGGGGGGGGGGGCGGGGGCTGTCCGGGGGGG
CCGCGGGAGGGGGAGAGGGCGGGGCGTGAATCTGTGGGCGGGGTCGAACA
AGTGGGTGCGGACGGAGGACGCGGGTAATGTTTGCTAGATGCCAGCGACA
CCAGAGGAGATTCAAGAAAAGCTGAGTAAAGACCTGAATGATTTGATCAC
TCCAGAGGATGAGGCGCCGGGAGACAGGCATCATCGCAATGGTCCCCGTC
GAGAAGATAGAGGCGGCCGTGCGTTTCGAGGCTGGCAGGTGCCGGGGGAT
GGATTCGGGCATGAAGGTCCTGTACTTGATTTCGGGCACCCCTCTGCCTT
TGCACCCCCTCCCCTCATGCATCGTATGCCGCCCGGATTTGTGGAGTACA
GGAACGCCGCTCTTCCCGGCGGACGAGGGGGGCACCCCTGGCAGGACGGG
GGCCCTCGGCGGCCTCCAGCCCAGCCAGGGCAGCAGTTTGTCGTGCGGTC
GGCGCCGGGAGCCCGAAAACCCGGCAGTGTCAGGTTATTCTACGTGTGGT
CGGCAGACGGGAAGGAGCTGCGTGTGGAGCATCAGCATCAAGAGCTGCTC
CTCATCACGGCGGCGGGGACTTTGAGGCTCAATGCGGGGGGGCGACCCCG
GTCCAGAGAAACCCTGCTGGGTCTGAATGTGGTGGTGTCTCTGTTGGGGA
TGGAAGTAGTGCAGGAGGAAGGGGCAGAGGAGGGGCAAGCTCAGGGGTCG
TGGAAGGTCCGGAAGGGCAGCTGGTCGCAGGCATTCGCGGAGGGCATGAC
GGTCTCAGCCTTCGCCTCGCGGGAGTGGCCCAAGATCCAGGCGCTTTTGA
CCAGACTCCCGCGAGACGTGACGCGCGAGGACATCGTCTTGGTCCCGCCA
CCACCTGTCCCGACGGGCCCGGCTCTGCTCGGAAAGCGCGAGGCAGTGGA
GGGGGGGGGGGCGGGGGCTGTCCGGGGGGGCCGCGGGAGGGGGAGAGGGC
GGGGCGTGAATCTGTGGGCGGGGTCGAACAAGTGGGTGCGGACGGAGGAC
GCGGGTAATGTTTGCTAGATGCCAGCGACACCAGAGGAGATTCAAGAAAA
GCTGAGTAAAGACCTGAATGATTTGATCACTCCAGAGGATGAGGCGCCGG
GAGACAGGCATCATCGCAATGGTCCCCGTCGAGAAGATAGAGGCGGCCGT
GCGTTTCGAG
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Synonyms
Publications