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Properties
| Property Name | Value |
|---|
| Product | early-responsive to dehydration 4 |
| Orig transcript id | gnl|cribi|Naga_100219g3.2198.mrna |
| Orig protein id | gnl|cribi|Naga_100219g3.2198 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1342662..1346473 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2826 ID=rna2826|Name=rna2826|organism=Nannochloropsis gaditana|type=mRNA|length=1873bp
AACACCGTTTAACAACGTACGGTTTTTGGATACACTTAGAGTTTTCCAAG
ATTTGAATCGTGCTTCACACACCCAATCCATGCTGCATCAAAGCGTCAAA
TGGTGGGAAAGAGAAGATAGGAGGGAAAGCGTTGATGACCAATCGAGCGC
GCAGATGAGAGAGGCAGGAATCGTTTATTTCCCAATCCTCATCTGCCTCC
TTTCCTTTGCAATCCAACACTCACTACAGAGTCAACACATCCAAGCCCGC
TTTCTTTCACTTTTCGACATCAACATGACTTCATTTTCATTGACCGAAGA
AGAAAGGACTGTCCAACGGGAATACTGGCAGGAACACAGCAAGAAACATG
GCTCAAGCATGGAAAACATGATGTTGGACGACTCTGCGTCCAAATTAGAC
TTGATGGATCGTCCAGAAATCTTGTCAATGCTCCCTACTTATTCTGACAT
TCGAATTTTAGAGCTGGCCTCAGGCATTGGGCGGTTCACGGGCTCTCTTG
CTAGCAAAGCAGGAAGCGTGGTTACGGTCGAATTTATGGAGGAGTTTGTT
GCCAAAAACAAAGAACTGCACAATCATTTCGGCAATTGCGATTTCCTGTG
TGCGGATGTCCTCAAGCTGACTCTTCCACCGGCCTCATTTGACCTGGTTT
TCTCGTGCTGGATTCAGATGTACCTCAACGATCAAGAGGTGCGCGTCCTA
GCCGCCCGAAAGCTTGAATGGTGCAAGCCCGGAGGTCACGTTTTCTTCCG
TGAATCATGCTTTCAGCAGTCGGGGAATGTTACCCGCGGTTTCAATCCCT
CGCATTATCGACACCCCTCGTTTTATACCTCCGTCTTCTCCGAGGTACGT
TGCACCGATGCTACGGATGGCATCGAATACAGGCTGGAGTTAGTGCGCTC
TCGCAACCTAGAGACGTACATCGCCGTCAAAGGCAATAAGGGCCAGATTT
GCTGGCTCTGGCGAAAGGTTCCTGTCACGAGCTCACAAGCCCGCTTGGTG
GGCAATGGAAATACGGGCCTCAGCAATGGCAACGGCGCCGGGCACAGCAA
CGGGCACAGCAACGGGCACAGCAACGGGCACAGCAACGGCAGCAAGAATG
AGTGCAACGGCGTTTCGAGTCCCCATGCGGACGACCTCCTCGCCCCCCCG
GCGACGGGCCAGCTCGCCACCCACGATGGTCTCTTCGGACCTGGCTTTGG
GAGCGACCGGGTGGGAGGCGCGGGGCCCGCGTCCGCCCTAGCCCGAGCCC
TGGAGCTCGGGGAGCCGGGTAAGCGCGTGCTGGATTGGCAGTGCGGTCTG
GGCGGGTACGGGCTGTGGCTGGCGGAAAAATGCGGCGCCAAGGTCTGGCA
GGTGGACGAGCGGACGGCCTTGATTGAGGGGGCGGTGCAGCACTCCAGGA
CCCTGCCCAAGGCGCACACGGTCTTGGAGGTCTGTCGTCTCCACAGCCGG
GAGTTCGATCCAGAGAGCCTGGACGCGGTCATCGTGCACACGCCACAGCC
CTTGAGCCCCTTGTCGTCCTCGTTTTACCACAGAGCGGCGGCCTGGCTGA
GGCCCGGGGGCCGAGGTGGTGATGACGGATATGACGGCGCAGATGGTGGA
GTGGATGGAGCAGAGTTTGACGGCCTCGCGCGCGGCCCACAGGACGGTGG
AGCCTGGCAATGGCCACACAAATGGCAACGCTCACATTGCGCGCAAAGAA
CAGGAATTGCAAACCGCTGTGGAACTGTGGTGGGAAGAACAGCTAGAGCG
AGTCAAGGCCGGTGGCTTACACTACTTTCTTTTCAAAGCAACCAAGCAAG
CTTGAACCTCTACGGTGAAAATTGTGCCGAAAATTTGCCACTGGTGATGA
TCAGACCTATTCTATCGACGTAA back to topprotein sequence of rna2826 >rna2826-protein ID=rna2826-protein|Name=rna2826|organism=Nannochloropsis gaditana|type=polypeptide|length=875bp
MADEGSQVDPRGEQPEVRSIQSLIGALLPALIIGILYLVAWWFLSRRFCD
IYDCKRRRLDLLREECKRNNARPRPRTPGWPEAFVDATTDTGNQSEANDS
RDANLSTTLPAAIGMDSVPIWPPQAAPPSPPPASRMAPARTLLSNNPFVW
LVTLWRTSEKDIIECVGSDAYMFLRFLRLGCWISLVATVLGLCILLPVNV
VGGNHLAQLERLSLSNVADQSSLLWVPLIIAYLLGGLALYVLHREYIVYV
ELRQRYLRAPTAQNYSVLVRDIPQPMDCDALLSYLRNLLGEDVAAVHCVN
RHRRARYDRLTRRKDAALLRLARAENELQATGGLHRPVHRDFCHVFGAPF
RLLPAWGPHIDTIGAMENEIGQCNRLLSLVRDEREALESLESQVHACILT
LGSVRVATASKTIPFQPRTEYFSASEAPAPAQLLWQHICSSQRERYIRNV
LVWSIVAAAILGYTVPVAFASSLANLTALSRTQAFTWLRPLVDASPALTA
FIQGFLPPLIVVYLLSLVPSFMKALSRSQHLVSDVECENAAIYKVFLFAL
FDIFLAYTIAGSFLSKIQQVIDLAENPSQVSNLFATTLPAQSTFFMTYIA
LAALSGLPGELSRLGALVMISLKKRFSRGSRSLWDELNLLTQPMGLHELY
NLPLVVFLALVTYSTVAPLVSLFALLFFALAYPVYVHQLMYVYQPTSHTG
GTQWPIVSGCCVAALLLQQVLLLGIFSIKRGFAQAALLLPLLVVTVTLGL
YHHSMYTPVAAVATLESLASTDIAEYGPTSWTALKQAYSPYSDKGQTNDV
SKARLYLWTEPYGVLTQGVFSEGQRVPVSAINTIPEEELSGTDSSEQGLK
RAQNASMDYGTLAGEDSVVDTKRDV back to topmRNA from alignment at CM002459.1:1342662..1346473+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2826 ID=rna2826|Name=rna2826|organism=Nannochloropsis gaditana|type=mRNA|length=3812bp|location=Sequence derived from alignment at CM002459.1:1342662..1346473+ (Nannochloropsis gaditana)
CGGACAGGCCACCGAATGGGCCGTCAACGCCTACGGCAGAAGAGAGTTCC
ACAAAATGAACATGTATTCGCTTAAAGCATCTGAGCTTGCTTAGAATTTT
CCAGATGATTGTGTGATTGCCCATTCCTTGCTGGGAAAGAGCCGAAACGT
CACGTGTTTGGGTGTGCATTGcgattttttcttttctgtgAGGACTTCGA
ACGCGTTCAATCGACCAAATTTTGCATCTTTTCTAATCGTCTGTCCCTAT
CGCATATTGCCAGTCTATGGCAGACGAAGGCAGCCAAGTCGATCCGCGCG
GCGAACAGCCCGAAGTGAGGTCGATTCAAAGCTTGATAGGCGCCCTGCTC
CCGGCACTCATAATTGGCATTCTCTACCTTGTAGCTTGGTGGTTTCTGAG
CAGGCGATTTTGCGATATTTATGATTGCAAGCGTCGGCGTCTTGATTTAC
TTCGTGAGGAATGCAAACGCAATAATGCGAGACCCCGGCCTCGAACCCCT
GGCTGGCCAGAGGCCTTCGTGGACGCGACGACAGACACTGGGAACCAAAG
TGAGGCCAATGACAGTAGAGATGCGAATCTTTCCACGACCTTACCCGCAG
CGATAGGTATGGACTCTGTGCCGATATGGCCGCCGCAAGCAGCTCCACCA
TCGCCACCTCCAGCTTCTAGGATGGCGCCCGCCCGTACCTTGCTATCCAA
TAATCCCTTTGTGTGGCTCGTGACCTTGTGGCGTACCTCAGAGAAAGATA
TTATTGAATGCGTCGGTTCGGATGCCTACATGTTTTTGCGCTTTTTACGC
CTTGGATGCTGGATCAGTCTTGTAGCAACGGTGCTGGGTCTTTGCATACT
ACTGCCCGTGAACGTGGTCGGTGGCAACCACCTTGCACAACTCGAGCGCC
TTTCCTTATCCAATGTTGCAGATCAGTCTAGTTTGCTCTGGGTACCTCTG
ATAATTGCGTACCTTTTGGGCGGCTTGGCGTTGTACGTGTTGCATCGTGA
GTACATTGTGTACGTCGAACTGCGCCAACGGTATTTGCGCGCTCCCACAG
CACAGAATTATTCTGTCCTCGTGCGCGATATCCCCCAACCTATGGATTGC
GATGCACTGTTGTCTTACCTACGTAATCTGCTAGGCGAAGACGTAGCTGC
CGTCCATTGTGTAAACCGTCATCGACGCGCGCGCTACGACCGGTTGACAA
GGCGCAAAGACGCAGCATTATTGCGTCTTGCACGGGCAGAGAATGAATTG
CAGGCAACCGGTGGCTTGCATCGTCCCGTCCACAGAGACTTTTGTCATGT
GTTTGGTGCCCCCTTTCGCTTGCTTCCGGCGTGGGGACCTCACATCGACA
CGATCGGAGCCATGGAAAATGAGATAGGGCAGTGCAATCGACTGTTATCT
TTAGTCAGGGACGAGCGCGAGGCGCTTGAAAGCCTTGAAAGTCAAGTACA
TGCCTGTATTTTGACCCTAGGCTCAGTACGTGTCGCCACTGCGTCGAAGA
CCATCCCTTTTCAGCCCCGTACCGAGTATTTCTCTGCCAGCgaggctcct
gctcccgcaCAGCTCCTGTGGCAACACATTTGCTCTTCTCAACGGGAGCG
CTATATTCGAAACGTGCTTGTATGGTCGATAGTAGCTGCGGCCATACTTG
GCTACACTGTACCTGtggcctttgcctcctccttggcgaaTTTGACCGCC
CTCTCACGTACCCAGGCATTCACCTGGTTGAGGCCTTTGGTGGATGCCAG
CCCGGCCTTGACAGCCTTCATCCAAGGCTTCTTGCCGCCGCTCATCGTGG
TTTATCTACTCAGTCTTGTTCCCTCTTTTATGAAAGCTTTGAGTCGGAGC
CAGCACCTTGTTTCCGACGTCGAGTGCGAGAACGCGGCCATCTACAAAGT
TTTCCTCTTCGCGCTCTTTGACATATTTTTGGCATATACCATCGCGGGCT
CCTTTTTGTCCAAAATTCAGCAAGTGATCGATCTCGCCGAAAATCCATCA
CAAGTTTCAAACCTTTTCGCAACGACGCTGCCCGCGCAGTCCACCTTTTT
CATGACGTATATCGCCCTCGCAGCTCTGAGTGGGCTACCTGGAGAACTTT
CACGTCTCGGCGCACTTGTCATGATAAGCCTAAAAAAGAGATTTTCGCGT
GGAAGTCGTAGTCTCTGGGATGAGCTGAATTTGTTGACTCAACCCATGGG
CCTGCACGAGCTGTATAACTTACCCCTCGTAGTTTTCCTGGCGCTTGTCA
CCTATTCTACCGTGGCACCTCTCGTTTCACTTTTTGCGCTTCTGTTCTTT
GCACTTGCCTACCCCGTCTACGTGCATCAACTCATGTATGTGTATCAACC
GACCTCCCACACCGGTGGTACGCAATGGCCAATTGTCTCTGGCTGCTGCG
TTGCGGCATTACTGCTGCAGCAGGTGCTCCTTCTTGGTATCTTCAGCATT
AAAAGAGGATTCGCCCAAGCTGCACTGCTTTTGCCATTGCTGGTGGTCAC
TGTCACGTTAGGCTTGTACCATCATTCCATGTATACACCCGTGGCGGCAG
TTGCCACCCTTGAGAGCTTGGCCTCTACTGACATTGCGGAATATGGCCCC
ACCTCTTGGACGGCTTTAAAGCAAGCTTACTCACCGTACTCGGATAAGGG
GCAGACGAACGACGTATCGAAAGCAAGGCTCTATCTGTGGACTGAGCCAT
ACGGCGTACTGACTCAAGGTGTGTTTAGTGAAGGGCAGAGAGTGCCGGTG
TCGGCTATCAACACGATCCCTGAGGAGGAGTTGTCGGGTACTGACAGTTC
AGAACAAGGTCTGAAGCGGGCTCAAAACGCATCAATGGACTATGGAACTC
TAGCAGGCGAGGATTCCGTTGTTGACACCAAACGAGATGTATAAAACATA
GCCTTTTGTCCAGACAGGAGAGCTCTGGTGAGCGAATCTCCTTGCGTTTG
TTATGCGTAAATGAAACGTctttgaagacgaagaagtgATCAAATTGTGA
AAAGACAAAGACTGTGCAGATTGTGCAGATAAGGTGGATCAATGTATACT
GTAAGGGGTATCTCGAAGAACAGTGTACGAAATAATAGGGAAAATAATTA
ATACGCTTCCTCATTCACGAATAAAGAGAGAATGTCGTCGGATGGGATAG
CTTTATTCGGCAACCTACGGAGCGAGTAGGAATGTATTTTTTGATGGCAC
AAAAGTACTACTACAATGCTAACTGATGTCCACCTTCTTCGGTCCCGTAA
GCAGAGGACTTTGTGAAGTTATGAAGAGGGATGTGGCTTCCGTGTACAAC
ACTGCCTCGTCCTTAGCATCTCGAATCTCTGCTCGTAGGAAAACCTTACG
TCCTTCAATCCGCTCCACTCGGGCCAAGACCTTGATCTCGGTGCCACAAA
TGATCGGCCTCTTGTAATTGATTGTGAGGTTGGCAGTGAAGCCATTACCT
TTCTATTTGGCGTTATAAAGTGCGGGCATATATGAGTACCAACGCGTCAC
TCCGACAACCCTCCAACTGTATATCCACACATCAGTCTTAGTCACGCGGC
TTAAACATTTGGTGCCTGCACCACGGTTGTTGAGCCGATATAATTGTGAC
TACCCTCCGAAAGATTGCATAGCATCCCGGGAGCCCCTTACATTGGCAGC
GAAGAATGCCACGCCCATAGTGTTGTCGAGTAAGGCGGCTATAGAGCCTC
CATGGATTATATCCGGATGCCCGCTGAGAAGCTTCCCGAGGCGAGCAAAT
GCTACGATAGAATCGTCACGCCTATCTTTGTACACCTCGTAGCCCTCTAT
CTTTTCCTTGCC back to topCoding sequence (CDS) from alignment at CM002459.1:1342662..1346473+ >rna2826 ID=rna2826|Name=rna2826|organism=Nannochloropsis gaditana|type=CDS|length=2628bp|location=Sequence derived from alignment at CM002459.1:1342662..1346473+ (Nannochloropsis gaditana)
ATGGCAGACGAAGGCAGCCAAGTCGATCCGCGCGGCGAACAGCCCGAAGT
GAGGTCGATTCAAAGCTTGATAGGCGCCCTGCTCCCGGCACTCATAATTG
GCATTCTCTACCTTGTAGCTTGGTGGTTTCTGAGCAGGCGATTTTGCGAT
ATTTATGATTGCAAGCGTCGGCGTCTTGATTTACTTCGTGAGGAATGCAA
ACGCAATAATGCGAGACCCCGGCCTCGAACCCCTGGCTGGCCAGAGGCCT
TCGTGGACGCGACGACAGACACTGGGAACCAAAGTGAGGCCAATGACAGT
AGAGATGCGAATCTTTCCACGACCTTACCCGCAGCGATAGGTATGGACTC
TGTGCCGATATGGCCGCCGCAAGCAGCTCCACCATCGCCACCTCCAGCTT
CTAGGATGGCGCCCGCCCGTACCTTGCTATCCAATAATCCCTTTGTGTGG
CTCGTGACCTTGTGGCGTACCTCAGAGAAAGATATTATTGAATGCGTCGG
TTCGGATGCCTACATGTTTTTGCGCTTTTTACGCCTTGGATGCTGGATCA
GTCTTGTAGCAACGGTGCTGGGTCTTTGCATACTACTGCCCGTGAACGTG
GTCGGTGGCAACCACCTTGCACAACTCGAGCGCCTTTCCTTATCCAATGT
TGCAGATCAGTCTAGTTTGCTCTGGGTACCTCTGATAATTGCGTACCTTT
TGGGCGGCTTGGCGTTGTACGTGTTGCATCGTGAGTACATTGTGTACGTC
GAACTGCGCCAACGGTATTTGCGCGCTCCCACAGCACAGAATTATTCTGT
CCTCGTGCGCGATATCCCCCAACCTATGGATTGCGATGCACTGTTGTCTT
ACCTACGTAATCTGCTAGGCGAAGACGTAGCTGCCGTCCATTGTGTAAAC
CGTCATCGACGCGCGCGCTACGACCGGTTGACAAGGCGCAAAGACGCAGC
ATTATTGCGTCTTGCACGGGCAGAGAATGAATTGCAGGCAACCGGTGGCT
TGCATCGTCCCGTCCACAGAGACTTTTGTCATGTGTTTGGTGCCCCCTTT
CGCTTGCTTCCGGCGTGGGGACCTCACATCGACACGATCGGAGCCATGGA
AAATGAGATAGGGCAGTGCAATCGACTGTTATCTTTAGTCAGGGACGAGC
GCGAGGCGCTTGAAAGCCTTGAAAGTCAAGTACATGCCTGTATTTTGACC
CTAGGCTCAGTACGTGTCGCCACTGCGTCGAAGACCATCCCTTTTCAGCC
CCGTACCGAGTATTTCTCTGCCAGCgaggctcctgctcccgcaCAGCTCC
TGTGGCAACACATTTGCTCTTCTCAACGGGAGCGCTATATTCGAAACGTG
CTTGTATGGTCGATAGTAGCTGCGGCCATACTTGGCTACACTGTACCTGt
ggcctttgcctcctccttggcgaaTTTGACCGCCCTCTCACGTACCCAGG
CATTCACCTGGTTGAGGCCTTTGGTGGATGCCAGCCCGGCCTTGACAGCC
TTCATCCAAGGCTTCTTGCCGCCGCTCATCGTGGTTTATCTACTCAGTCT
TGTTCCCTCTTTTATGAAAGCTTTGAGTCGGAGCCAGCACCTTGTTTCCG
ACGTCGAGTGCGAGAACGCGGCCATCTACAAAGTTTTCCTCTTCGCGCTC
TTTGACATATTTTTGGCATATACCATCGCGGGCTCCTTTTTGTCCAAAAT
TCAGCAAGTGATCGATCTCGCCGAAAATCCATCACAAGTTTCAAACCTTT
TCGCAACGACGCTGCCCGCGCAGTCCACCTTTTTCATGACGTATATCGCC
CTCGCAGCTCTGAGTGGGCTACCTGGAGAACTTTCACGTCTCGGCGCACT
TGTCATGATAAGCCTAAAAAAGAGATTTTCGCGTGGAAGTCGTAGTCTCT
GGGATGAGCTGAATTTGTTGACTCAACCCATGGGCCTGCACGAGCTGTAT
AACTTACCCCTCGTAGTTTTCCTGGCGCTTGTCACCTATTCTACCGTGGC
ACCTCTCGTTTCACTTTTTGCGCTTCTGTTCTTTGCACTTGCCTACCCCG
TCTACGTGCATCAACTCATGTATGTGTATCAACCGACCTCCCACACCGGT
GGTACGCAATGGCCAATTGTCTCTGGCTGCTGCGTTGCGGCATTACTGCT
GCAGCAGGTGCTCCTTCTTGGTATCTTCAGCATTAAAAGAGGATTCGCCC
AAGCTGCACTGCTTTTGCCATTGCTGGTGGTCACTGTCACGTTAGGCTTG
TACCATCATTCCATGTATACACCCGTGGCGGCAGTTGCCACCCTTGAGAG
CTTGGCCTCTACTGACATTGCGGAATATGGCCCCACCTCTTGGACGGCTT
TAAAGCAAGCTTACTCACCGTACTCGGATAAGGGGCAGACGAACGACGTA
TCGAAAGCAAGGCTCTATCTGTGGACTGAGCCATACGGCGTACTGACTCA
AGGTGTGTTTAGTGAAGGGCAGAGAGTGCCGGTGTCGGCTATCAACACGA
TCCCTGAGGAGGAGTTGTCGGGTACTGACAGTTCAGAACAAGGTCTGAAG
CGGGCTCAAAACGCATCAATGGACTATGGAACTCTAGCAGGCGAGGATTC
CGTTGTTGACACCAAACGAGATGTATAA back to top
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