rna2812, rna2812 (mRNA) Nannochloropsis gaditana

Overview
Namerna2812
Unique Namerna2812
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1422
Alignment locationCM002459.1:1295122..1296721 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100094g4.6810.mrna
Orig protein idgnl|cribi|Naga_100094g4.6810
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1295122..1296721 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100094g4gene2692Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27875.1cds2804Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2812rna2812-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2812 ID=rna2812|Name=rna2812|organism=Nannochloropsis gaditana|type=mRNA|length=1422bp
CACCTGCCTGCAAACACCCTGATCAAGCCGCTTAGAAGACCTCTTCCTCT
TCTTCTTGAACCTGATGCATGGATACATGTCTATTACCATTTTCTTAACG
GTTATGATGGCAAACTCTTCTTTTCGGGCTGTTGCTCGTACAAATTTACA
TGTGCATGTCGTAAGATCGACAGCTTGGCTTGCGCATCGTCCATCTTCAA
TGCGCCCTACAGATCGTCTTAAATCATCATCTATTTCGTCCGCGGCACCA
TCTCCCTTTTCCTCTGCTTCCCATCCATATACATCGCCCATCGTATTGGT
TGCCTCCGACGTGGATGGCACCCTCCTTGGTAGCTCGCACACAATTTCTC
CTCGTACAATTGCTTCCATCCGCGCCCTCCGAAAGAAGGGAATTCTCTTT
GTGCCTGCCACAGGAAAATCCCGTGGGGGGGTTCGAAATGCGCTAGGCGC
GTTGGGTGAGGAGCTCACCTCAAGTATGGCTACAGGCGGGGTCTATCTCC
AAGGTTTGATCGTGTACAAAGGTGGAGAAGTCATTTATGAACGAATGCTA
GATCCCCAAGTCGCGCTGGACGTGATGAGATTCGCACGGGAGAGAAACGT
GTCCCTCATCGCCTTCAATGGAGATCGCATTCTATGTGAGAAGATGGATG
CGACCATTGCGAGCGTTACACAACAACACGAGCCCATGCCGGTGGTTGTC
TCCCTCGAAGCGTTTTTGTTAGCGTCGTGCCACTCCCTCGGCCCGGCTTC
AGCCCCATCTTCCTCTTCAACTCCGTCAGTCAAAGTGTCTGTAACTACGT
CGACTTCCTCTCCTACATCTACGGCCTCTTCTGTACAACCGCCCCCTCCC
GTGGCGGCTACAGCAGTGTATGCATCCTCACGAACCCCACATTCGCCGCA
GGCCCCGGCGCCCTCATCATCCAACCGCACAGAAAGCACCAGCATCCATA
AGCTTATTCTTCTCGGCCCTCCTCCCCTCATGGCATCCCTTCGGCCTGCC
CTCGAAAGCTTTCTGGGGCCAAGGGCAAGCATCACCAAGGCCCAAGACGA
CATGCTAGAAGTCCTTCCGTCCGGCGGTTCGAAGGGATTGGGACTGAGGA
AGCTGCTGGAAGCTTTAGACGTGCCAACATCCAGAATTCTTGCCATAGGA
GACCAGGAGAATGATTTAGAGATGCTGAAGATGGCGGGGACGGCGGTAGC
CATGGGGAACGCGCCCAGGCACGTGAAGGCAGTTGCGGGTCATAGCACTC
GCTCGAACGACGAGGATGGCGCCGCCAGGGCCTTTGAACGATTTTGCTTG
CAGGAATTGTCTGGCTTGATATGAATGATGCTCGAAGCATTGATTGGAAG
CTTTTGTGGTTTGTGTATATTAGCGGGGCAAAAAGACTTGTGTTCTGAAC
ATAGAAAAAGGGAAAAAGCGTC
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protein sequence of rna2812

>rna2812-protein ID=rna2812-protein|Name=rna2812|organism=Nannochloropsis gaditana|type=polypeptide|length=471bp
MRRPRSRRKDRFHRILGLSMFPVVLFYYPSTSTCAWRIPAASLLTRGKAV
TNLFTACSTSFGLLLPHSLPLDIKIAPDVSSTNEAVDISSAISVLGGYRI
PANQYSTYQRDLLTLIPSLRKENVKIFADRAGDDGEIEAIVRQLSNVTPA
HSPRKIILVAHSRGAAVAVRVAARLASSPLTHEVRGLLLIDPVDEQETYD
AGGSTARLNDMVPSNSGDSNTLQPFISSTLRSSCQSAFPSSFHGPTSSCL
PLLRCLPPRLPVVIVSLPFTGLNSYYRSPNRNICAPPERDARAFFKASSY
AAAAAVDDHTASTAGSRGAGSDVGRLAIVRTSPTAGSDPFPASSGQSPSS
SVISYPLLLTLPFAGHLQLLDDRLALPFAEVCGVSKSIPDKEVQAVISAV
IVACCEHWLKEGGGQDKEPTRVEALRQVMDLSARTRGVRQELWNSITWGG
EGPRGKEVIEECEKTGDNVPD
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mRNA from alignment at CM002459.1:1295122..1296721-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2812 ID=rna2812|Name=rna2812|organism=Nannochloropsis gaditana|type=mRNA|length=1600bp|location=Sequence derived from alignment at CM002459.1:1295122..1296721- (Nannochloropsis gaditana)
TAACACAGTACAATGAGACGACCTCGATCAAGACGAAAGGATCGGTTCCA
CCGTATTTTGGGACTGAGCATGTTCCCTGTCGTTCTTTTCTATTATCCAT
CAACTTCGACTTGTGCGTGGAGGATACCTGCTGCCTCGCTTTTGACCCGT
GGCAAAGCCGTCACAAACCTTTTCACTGCATGCAGCACGAGTTTTGGACT
TCTTCTTCCCCATTCTTTACCTTTGGACATTAAAATAGCTCCAGATGTCT
CTTCTACAAACGAAGCTGTGGATATTTCGTCAGCCATCAGCGTCCTAGGC
GGCTACAGGATCCCCGCCAACCAGTACAGCACCTATCAACGTGATCTCCT
CACCCTCATTCCTTCCCTCAGGAAAGAAAACGTCAAAATCTTTGCAGATC
GTGCAGGAGATGATGGAGAGATTGAAGCCATTGTGCGTCAGCTCTCCAAT
GTGACACCAGCACACTCACCCAGAAAAATTATTCTCGTAGCACATTCACG
AGGGGCGGCGGTGGCTGTCCGCGTCGCCGCCCGCCTAGCATCTTCACCGT
TGACTCATGAAGTGCGAGGTCTTCTTTTGATTGATCCTGTTGATGAGCAG
GAAACATATGACGCGGGAGGTAGTACGGCCCGCCTCAACGACATGGTTCC
AAGCAACAGCGGCGACAGCAACACCCTCCAGCCCTTTATCTCCTCCACCT
TACGCTCTTCATGTCAATCAGCCTTCCCTTCGTCCTTTCATGGGCCCACT
TCCTCATGTCTTCCCCTTCTCCGGTGCCTTCCCCCACGCCTACCGGTAGT
CATCGTCTCCCTACCTTTCACTGGCCTTAACTCTTATTACAGAAGCCCTA
ACCGCAATATCTGTGCCCCCCCCGAGCGCGACGCCCGGGCGTTTTTCAAA
GCCAGCTCTTATGCTGCAGCTGCTGCTGTGGACGACCACACAGCTTCCAC
CGCTGGCAGCCGCGGGGCGGGCAGTGACGTCGGGAGACTTGCGATCGTCA
GGACTTCTCCCACGGCCGGTTCCGATCCGTTTCCCGCGTCCTCTGGGCAA
TCGCCTTCGTCATCCGTGATCTCCTACCCCCTTCTGTTGACGCTTCCCTT
CGCAGGCCACCTCCAGCTCCTCGACGACCGGCTCGCCTTGCCCTTCGCCG
AGGTCTGTGGCGTTAGCAAGTCAATTCCTGACAAAGAGGTTCAAGCTGTG
ATCTCCGCTGTCATCGTTGCCTGTTGTGAGCATTGGCTGAAGGAGGGGGG
GGGGCAGGATAAAGAACCAACACGAGTGGAAGCTTTGCGACAAGTGATGG
ACCTGAGCGCAAGGACTAGGGGGGTCAGGCAAGAGCTCTGGAATTCGATC
ACTTGGGGGGGGGAGGGGCCCAGAGGCAAGGAAGTGATAGAAGAGTGTGA
GAAAACAGGTGACAATGTACCTGACTAAGGGCGGAAAGAGGTCTGAAGAT
GGTAGGGCTGTAAAAGCGAAGAAGCGACGCATCGAGAAAGTGTGGGGAGC
CCCCCCCCCATGTACATAGCTAAACGGGACAAAGGAAGCATGGATAGTGT
AAGGACATCTTTTGATGCCCCAAGAATCAGTGAAGACCTCCAGTTTTGCG
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Coding sequence (CDS) from alignment at CM002459.1:1295122..1296721-

>rna2812 ID=rna2812|Name=rna2812|organism=Nannochloropsis gaditana|type=CDS|length=1416bp|location=Sequence derived from alignment at CM002459.1:1295122..1296721- (Nannochloropsis gaditana)
ATGAGACGACCTCGATCAAGACGAAAGGATCGGTTCCACCGTATTTTGGG
ACTGAGCATGTTCCCTGTCGTTCTTTTCTATTATCCATCAACTTCGACTT
GTGCGTGGAGGATACCTGCTGCCTCGCTTTTGACCCGTGGCAAAGCCGTC
ACAAACCTTTTCACTGCATGCAGCACGAGTTTTGGACTTCTTCTTCCCCA
TTCTTTACCTTTGGACATTAAAATAGCTCCAGATGTCTCTTCTACAAACG
AAGCTGTGGATATTTCGTCAGCCATCAGCGTCCTAGGCGGCTACAGGATC
CCCGCCAACCAGTACAGCACCTATCAACGTGATCTCCTCACCCTCATTCC
TTCCCTCAGGAAAGAAAACGTCAAAATCTTTGCAGATCGTGCAGGAGATG
ATGGAGAGATTGAAGCCATTGTGCGTCAGCTCTCCAATGTGACACCAGCA
CACTCACCCAGAAAAATTATTCTCGTAGCACATTCACGAGGGGCGGCGGT
GGCTGTCCGCGTCGCCGCCCGCCTAGCATCTTCACCGTTGACTCATGAAG
TGCGAGGTCTTCTTTTGATTGATCCTGTTGATGAGCAGGAAACATATGAC
GCGGGAGGTAGTACGGCCCGCCTCAACGACATGGTTCCAAGCAACAGCGG
CGACAGCAACACCCTCCAGCCCTTTATCTCCTCCACCTTACGCTCTTCAT
GTCAATCAGCCTTCCCTTCGTCCTTTCATGGGCCCACTTCCTCATGTCTT
CCCCTTCTCCGGTGCCTTCCCCCACGCCTACCGGTAGTCATCGTCTCCCT
ACCTTTCACTGGCCTTAACTCTTATTACAGAAGCCCTAACCGCAATATCT
GTGCCCCCCCCGAGCGCGACGCCCGGGCGTTTTTCAAAGCCAGCTCTTAT
GCTGCAGCTGCTGCTGTGGACGACCACACAGCTTCCACCGCTGGCAGCCG
CGGGGCGGGCAGTGACGTCGGGAGACTTGCGATCGTCAGGACTTCTCCCA
CGGCCGGTTCCGATCCGTTTCCCGCGTCCTCTGGGCAATCGCCTTCGTCA
TCCGTGATCTCCTACCCCCTTCTGTTGACGCTTCCCTTCGCAGGCCACCT
CCAGCTCCTCGACGACCGGCTCGCCTTGCCCTTCGCCGAGGTCTGTGGCG
TTAGCAAGTCAATTCCTGACAAAGAGGTTCAAGCTGTGATCTCCGCTGTC
ATCGTTGCCTGTTGTGAGCATTGGCTGAAGGAGGGGGGGGGGCAGGATAA
AGAACCAACACGAGTGGAAGCTTTGCGACAAGTGATGGACCTGAGCGCAA
GGACTAGGGGGGTCAGGCAAGAGCTCTGGAATTCGATCACTTGGGGGGGG
GAGGGGCCCAGAGGCAAGGAAGTGATAGAAGAGTGTGAGAAAACAGGTGA
CAATGTACCTGACTAA
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Synonyms
Publications