|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100267g5.4725.mrna |
| Orig protein id | gnl|cribi|Naga_100267g5.4725 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1157551..1159159 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2769 ID=rna2769|Name=rna2769|organism=Nannochloropsis gaditana|type=mRNA|length=1654bp
CCACTGCGCACACATCAACAGCATGGAAACCTACCCGATAGCAACGGAGA
CGGACATACACAATCCTCGGGCCCACACAGCACATTATTATGCCTCATCG
TCTGCGAAAACTCTCGTTCGCGATGATGCCCGGCATGGGCTACTCTGGCG
CGCCCTTCTTGCTCCACGCGCCTTAGGATCTTCAATCATTCATGGCATTA
GTGCCACATTTTTACCCGTTGGCTACCCATACAGTGTGCGTGAGGAGTAC
CTGACGTACCAGATCTGGGACACTGTGCAGGCATTATGCAGCTATTTGAG
AGGAATTCTGACGACAAAAGCCATTCTGGAGGGAAGTGGAGTAGGGTCTG
AGGCAGCCAGTGCCCTTTCTGCAGCCATGAATTGGGTATTTCGGGACGGC
GTGGGCATGGCATGCTCCCTCCTGTTTTCCTCGATGGCCTCAATCAGCTT
CGACTGCAACGTGAAGGAGTGGCGCCTTTTTGCTGACATATCGAACGATG
TGGGGCTGACACTCGACATGCTAACCGGATTGCCGAGCTTGAAAGGCCAC
TTTCTGCTGCTTACCTGCTTGTCAACGGTATGCAAGACCATGTGCGGGGT
GGCGGCCGGCTGCACCAAAAGCAGCATTACCGCCCACTTTTCCCTCCGTG
GCAACATCGCCGACGTTTCTGCCAAGGAAAACGCTCAGGAAACTGCCGTG
ACCTTGTTTGGGATCGTGGGCGGCCTCCTGTGCGCCCAGTGGATCGCCTG
CCCAGAAACGGCATGGCCCGTCTTCCTCTCCTTGACTGCTTTGCACGTTT
TGGCCAACTACAAGGGCGTTGTCGCGCTCAAGTTGTACTCTCTCAATACG
CAGCGTGCTGCCATCCTCATCGACGATTTCCTGAACCGAGACCAGGGGAT
GGACCGCGCTGAGGGACAGGGCACCCAGGATAAGAAGAGAGGTGACAGCA
CAACTATCGGAAGCAGCACAACAGACTCCCCCCATCCTCTCCCTCGACTC
CTCACTCCTACCCAAGTCATGGCACGCGAACGGATCTACCAGCCTCTGTG
GAGCTGGCTCTTGGCCCAACAACCCTGCCTAGGGAGCCGAATCAGTGACC
TCTCCCTCCCTTCCCCCGCGCACCTCTCCTTCCTCATGCGTGTCTTTTCC
CACGAAAGCTACCTGCTCACTTTCGCGCCATTTTCGGGGCGAGTAACTGT
CATCTTTCGAGCCGGCGCCACTCCACAGGACGAGCTGAAAGCGTTCTTTC
AGGCGCAAGTGATCAAGCGCCTGGATCTGGATCGCAGGGTGGGGAACGGC
GGGAGAGAGGCAAGTAGGGAAGCAGGAAGGGAAGCAGGGAGGGAAGCAGG
AAAATGGCCGTCGCCGCTTTTGGGGAAACTGGTCCTGAAAAGTTACGAAA
CGACGGTGCATCGCTTTCCTATCTTTTGGGCGGCGTTGCAATCGGAAAAC
GGAAAGAATGAGATAGGCGGGGAGGAGCCGAGATCGGATAGGAGTGCCGC
GGGCGAGGAAGGCTGGGATCTGGGCCGTATGAACTTGGGGACCAGGGGTT
GGCGTTTGATGGAGACTGGTGAGCATCGGACGTCTAAGAAGAAGAGCTGA
GGCATTGTAGACAAAGAAACAAATATCTTACACAGGGTTCGCTCTGGGTT
TTAA back to topprotein sequence of rna2769 >rna2769-protein ID=rna2769-protein|Name=rna2769|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MQGSRGIPSSEMNARVTGAGNVVAGSADDEEDDEIIVDQHASVAPRQQHP
ASISHQGDPPLDNPLHATHAASLVSEDLSGPTSLSSILATLRGTRPPVAA
VATATSPPPPQAPQNIPASANTFPRPRMEPERRRLHALPATTAKGYKYVQ
CMSCVEEEWLRVPVAAKYVRCPTCGSITIALASNSRFPARQGRREEGNPC
TRLWARLFSRRSMHL back to topmRNA from alignment at CM002459.1:1157551..1159159+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2769 ID=rna2769|Name=rna2769|organism=Nannochloropsis gaditana|type=mRNA|length=1609bp|location=Sequence derived from alignment at CM002459.1:1157551..1159159+ (Nannochloropsis gaditana)
AGCGCAGCGGCGCGAGCTTTGCAGCATTATACTTCCATGGCCCGGGCTGA
AGACGAAGATGCACGCCTCGCTTGGCTGGTGAGTGCAGTAGACATGCTTC
ACATTCATATTATGCTTTATCCTACAGAGTCTCATGCCAACTATTTTCTG
AAACGTTCGTACAGCGAGACGAagtcgacgaggacgacgacgaggacgag
gaggaaacgagacCTACCCTGTTCTGTAGAGGTGCCCTGGGAGCCTTATG
TTCGGCGATCCACCATCTCCACCCTTACGAAACAACTTCTGAAAGCAAAG
AAATAGAGAGCAGGAAGAGACAAGGACATCGCCAAAGAATGCAAGGCAGC
CGAGGCATCCCTTCCAGCGAAATGAATGCGCGTGTCACGGGCGCCGGGAA
TGTGGTCGCGGGATCGgcggacgatgaggaggacgatgagatAATCGTTG
ATCAACATGCCTCGGTAGCCCCAAGACAGCAGCATCCTGCTTCTATTTCC
CACCAAGGCGATCCTCCCTTGGACAATCCTTTGCACGCCACTCACGCTGC
TTCTCTCGTTTCCGAGGACCTCTCTGGCCCGACCTCCCTAAGCAGCATCT
TAGCTACCTTACGAGGCACGCGCCCCCCCGTAGCGGCTGTGGCCACAgct
acctctcctccccctccacaagCGCCTCAAAATATCCCTGCCTCTGCAAA
TACCTTCCCCCGTCCACGCATGGAACCAGAACGGCGACGGCTTCATGCTT
TGCCTGCCACGACCGCTAAAGGGTATAAATATGTGCAATGCATGTCTTGt
gtcgaggaggaatggCTGCGTGTCCCAGTGGCTGCCAAATATGTTCGGTG
CCCCACCTGCGGTAGCATCACGATCGCCCTTGCCTCCAACTCGCGCTTTC
CGGCGcgccaaggaaggagggaggaggggaatcCGTGCACACGTCTATGG
GCGCGGCTTTTTTCCAGAAGAAGCATGCATTTGTGACTCGTGGGCCAGAA
TTGAAACATTAATACGGGATACTATATCATTGGAAATCGATGTATTCAAT
CATGCAGGGTGTGGTGTGGGGAATGAGCAAGGAAAGTGACTAGAAGGATA
ACAGAGAATTTGCCACGGGTGGGATGTCGACATGTCAAAGAAAAGGCCAG
CGAAGATGGCATGACGTCGGAGGAACGGGAAAAACGGAGGAAACGTATGA
CGGGCGGGGGAAACTACGAGACGTAAGGAGCATGTTGGAGGTGAAGCATG
TGTAGAAGAAAATTTTGtgagagggatggaaggtgagagaaggaggatga
caaAGAGGCTGAAAGAAACAGAGAGAGAATGGAAGAGAGTGAgatgggag
gtggagaggcggagaaagcgagggcgaggggctTTGGGCATGCCATGAGA
AGTGTTTAAGAAGGACTATTGCACACAGAATTCACTGTCTGCTCATCGTA
CTTCACAATACCATTACATTCAAATACACCATcgttctttctcttccatt
tttCTGATTGCTGAAAAGAGCTTCATTTCTTGTGGGTCGCCCTTTGACAT
GTCGAGTACACGactgcttctttttctttccttccgacGACCGCCCCTTA
TTCCGCGTG back to topCoding sequence (CDS) from alignment at CM002459.1:1157551..1159159+ >rna2769 ID=rna2769|Name=rna2769|organism=Nannochloropsis gaditana|type=CDS|length=648bp|location=Sequence derived from alignment at CM002459.1:1157551..1159159+ (Nannochloropsis gaditana)
ATGCAAGGCAGCCGAGGCATCCCTTCCAGCGAAATGAATGCGCGTGTCAC
GGGCGCCGGGAATGTGGTCGCGGGATCGgcggacgatgaggaggacgatg
agatAATCGTTGATCAACATGCCTCGGTAGCCCCAAGACAGCAGCATCCT
GCTTCTATTTCCCACCAAGGCGATCCTCCCTTGGACAATCCTTTGCACGC
CACTCACGCTGCTTCTCTCGTTTCCGAGGACCTCTCTGGCCCGACCTCCC
TAAGCAGCATCTTAGCTACCTTACGAGGCACGCGCCCCCCCGTAGCGGCT
GTGGCCACAgctacctctcctccccctccacaagCGCCTCAAAATATCCC
TGCCTCTGCAAATACCTTCCCCCGTCCACGCATGGAACCAGAACGGCGAC
GGCTTCATGCTTTGCCTGCCACGACCGCTAAAGGGTATAAATATGTGCAA
TGCATGTCTTGtgtcgaggaggaatggCTGCGTGTCCCAGTGGCTGCCAA
ATATGTTCGGTGCCCCACCTGCGGTAGCATCACGATCGCCCTTGCCTCCA
ACTCGCGCTTTCCGGCGcgccaaggaaggagggaggaggggaatcCGTGC
ACACGTCTATGGGCGCGGCTTTTTTCCAGAAGAAGCATGCATTTGTGA back to top
|