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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF647 |
| Orig transcript id | gnl|cribi|Naga_100267g6.4729.mrna |
| Orig protein id | gnl|cribi|Naga_100267g6.4729 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1155283..1157140 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2768 ID=rna2768|Name=rna2768|organism=Nannochloropsis gaditana|type=mRNA|length=2399bp
GGGATACTGCCCGGGCCAGTACAGGAGCGTAAATGCGGTGACGATACAAG
ATAACGTGCTGTCGTGAAGCCTTCGACTTTTCATCAGGGCGGTGAGGGTC
GAAGACGGCTTGGACAGTGATACTGAAAGAAAAGTGCGACTCGAGCCCCA
ACGTCCGGGTGCATGGATCAATACGAGGTAACGAAGCTCATCTCCAAAAG
CAGCTCGAGCCTTGTGTATCTTGGTCGGAAGGAATGTGACGGTACACCCG
TGGCGATTAAAAAAACGAGTCTTGCCGGTCGCGACGCCAGAGCTCAGGAG
AAATGTTTGCGGGAGGCTCGCCTCATCACGTCCCTCTCCTCCACCCACCC
CAACCTTCTCTCTTGCCTGGACGCCTTCCTGGTCGTCGAAAAGGGAGCAC
AGTCCTATTTGATCGTAGTGACGGAATGGGCCGAGGCGGGGGACCTCGCC
CGCGTGATCCGCAAGGCGCGAAAGGAGGAGAGGAGGATACATGGAGGGTT
ATGTGAGGCGCGGGTCTGGGGATGCCTGGAGCAGCTTTGTGCAGGGATCG
AGCATTTGCACAAAGCCAGGATCGTTCACGGGGACTTGACACCCTCACAC
GTGCTTTTTGATGGGCAAGGGACGTTAAAGGTAGGCGGAGTCAGCATCTC
GCAGTCGCGGGTCAGACCACCCACCCTCCACGGCCATCCCCCTGAAGCTG
CCCCCGCCTCCCAGGCAATGGGGGCGGGGGGAAAGAAGCGAAGGAAGCCA
GTGCCGGTATACGCGCCCCCAGAGATCCTCCGGGGGGACGGGCCCGGGTG
GAAGAGCGATACGTGGAGCCTGGGATGCCTGGCGTTTGAGATGGGCGCAG
GGCGGCCCCCCTACCAGCTCGGCGAGGGCGGGGTGGAGGGCCTTCTTGCA
GCGATGGGTTCCGGAGGAGAGGAACTGGCGTGGCCTGAAGGGTTCTCGAA
GGAGCTTCGAGATTTGGTAAAATCCACGCTGTCGGTGGACCCGGCCCAAC
GCCCGGACGTGGAGCGCGTCCGAGAAACGGCTCGGAGAATCGGAATTACA
CGGGGGGAAGGTCCCCGGTGGGAACAAAGGAGAGGAAACGGGGGGGGCGA
AGGCCTTAGATGGGTGGGAGCTATGGAAACGGGCGAGAATGTGGAGGCAG
GGTCGGAGAAGGGATGGAGCGCATGGCCGACCTGCTCGCCCGCCCGAGGG
GGGAGGGGAAAGCTATTGGAAGGCCGGTGGACGAAGCAGGCAGGAAAGAA
GAAGGGCGGGAAGAGGGAAGAGGCAAATACTGACCAAGGGCCAGAGACGG
CCCTCCCCGCGAGCGAGTCGCGAGCCACTGGGGGATCGCTTCCGGGACAG
GGGGCCTTGACTAGCGCCCTGGATGGAGCAGGCTCGGGGGGTCAAGGAGA
GGGCAGCATGGCGGCTTGGTCGAGCGAGGACGATACAGGGCCGCAGGGCC
GTCGGCAGGAGGACCCTCTGGAGGCAGTCGTGGCCAGATTGTCCCTCCAG
CCCCGTTCGAGAGCAGTGGGCACCGAAATGGGCTGGCAGGGCCCCGGAAA
CATCCCACAGTCTCCATCGAGGGGCTTGGGGCCCACAGGGCTGGAGGCCA
GGGGCGGGAGTCCGGAGCCTTTGGGTCGACCTATAGGAGCAACAGGTCGT
GAGGAGCGGCCGTGCACGGTCGAAAGCATGCAGGCGGGCATTCGCTGCCT
CCAGGGTCAGCTTCAGTCGCTCCAGTCCAAGGTGGCGGAGAAACATCGTC
GGATCCGCGATCTTGACGCGGCCCTTCTCCGAGTGGAGTGGGCACTTGCT
GACAGGAGGGAGGGAAAGGGATTGGGACGCTCCGAGGTTAGTGAAAAGAA
AGGGATTGTGTATGGAAAGAGCGGCCTGGGGTTGATGGAGGTGCGAGAGA
CTGTGAAGCAGTTGCAGGAGGAAAATCGGGAGATGCGCCTGAGGACAGGG
TTTCTTTTGCAAATGCTTGGAGAGCTACGGGCAAGAAAGGCGGAAGATGC
CCGGAGGAAGCGCCAGAGGCTGAGACGGGGGCAGCAGTTCCAACGAAGGA
GGGTGTGGGGAGATGGAAAGAGCGCGGAGAAGTCAGGGTGGGAGGCTGAC
GGGCTGTGAGGGGATGGGGGTCCCCAGGGCGTCTGGGTGATCCTTCGCTT
CCCTTGCAAGCATACGCGTGGCGTGTTCTCGCTAGCACCTGAGGGGATGA
AAATGAAGGCGGGGAATGACACGGGCAGCTTCTGGTGCACAGGGGCGGTA
AAGGATACATATGACAGACAATTGTTTGGAACCTGCCTGATCGTGTCTGC
GCAAATTACTACCGGGTCAGCCGAATAAATATGCTTTATGGGGGGATTCG
CACCATCCATCCGGAACACTAAAGTACATTACTCAGATTTAAAACCCAG back to topprotein sequence of rna2768 >rna2768-protein ID=rna2768-protein|Name=rna2768|organism=Nannochloropsis gaditana|type=polypeptide|length=525bp
METYPIATETDIHNPRAHTAHYYASSSAKTLVRDDARHGLLWRALLAPRA
LGSSIIHGISATFLPVGYPYSVREEYLTYQIWDTVQALCSYLRGILTTKA
ILEGSGVGSEAASALSAAMNWVFRDGVGMACSLLFSSMASISFDCNVKEW
RLFADISNDVGLTLDMLTGLPSLKGHFLLLTCLSTVCKTMCGVAAGCTKS
SITAHFSLRGNIADVSAKENAQETAVTLFGIVGGLLCAQWIACPETAWPV
FLSLTALHVLANYKGVVALKLYSLNTQRAAILIDDFLNRDQGMDRAEGQG
TQDKKRGDSTTIGSSTTDSPHPLPRLLTPTQVMARERIYQPLWSWLLAQQ
PCLGSRISDLSLPSPAHLSFLMRVFSHESYLLTFAPFSGRVTVIFRAGAT
PQDELKAFFQAQVIKRLDLDRRVGNGGREASREAGREAGREAGKWPSPLL
GKLVLKSYETTVHRFPIFWAALQSENGKNEIGGEEPRSDRSAAGEEGWDL
GRMNLGTRGWRLMETGEHRTSKKKS back to topmRNA from alignment at CM002459.1:1155283..1157140- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2768 ID=rna2768|Name=rna2768|organism=Nannochloropsis gaditana|type=mRNA|length=1858bp|location=Sequence derived from alignment at CM002459.1:1155283..1157140- (Nannochloropsis gaditana)
CCACTGCGCACACATCAACAGCATGGAAACCTACCCGATAGCAACGGAGA
CGGACATACACAATCCTCGGGCCCACACAGCACATTATTATGCCTCATCG
TCTGCGAAAACTCTCGTTCGCGATGATGCCCGGCATGGGCTACTCTGGCG
CGCCCTTCTTGCTCCACGCGCCTTAGGATCTTCAATCATTCATGGCATTA
GTGCCACATTTTTACCCGTTGGCTACCCATACAGTGTGCGTGAGGAGTAC
CTGACGTACCAGATCTGGGACACTGTGCAGGCATTATGCAGCTATTTGAG
AGGAATTCTGACGACAAAAGCCATTCTGGAGGGAAGTGGAGTAGGGTCTG
AGGCAGCCAGTGCCCTTTCTGCAGCCATGAATTGGGTATTTCGGGACGGC
GTGGGCATGGCATGCTCCCTCCTGTTTTCCTCGATGGCCTCAATCAGCTT
CGACTGCAACGTGAAGGAGTGGCGCCTTTTTGCTGACATATCGAACGGTA
AGTTGTTCATTTGCTCTTTCGTACTGTACTTCATACCCTTCCTTGATGTA
TAAGCTTACACTTATTTGGATATTTGGGGTTTGCATGTACCTTCTTGCAA
TCAAAATCTGGCGTCTCTTTTACTTCTTTACCTGACGCGTATTAAATCGT
CGAGTGGGAGCGAGCATTCACACAATACCATTCCTCCCTCTTACACCGCA
GATGTGGGGCTGACACTCGACATGCTAACCGGATTGCCGAGCTTGAAAGG
CCACTTTCTGCTGCTTACCTGCTTGTCAACGGTATGCAAGACCATGTGCG
GGGTGGCGGCCGGCTGCACCAAAAGCAGCATTACCGCCCACTTTTCCCTC
CGTGGCAACATCGCCGACGTTTCTGCCAAGGAAAACGCTCAGGAAACTGC
CGTGACCTTGTTTGGGATCGTGGGCGGCCTCCTGTGCGCCCAGTGGATCG
CCTGCCCAGAAACGGCATGGCCCGTCTTCCTCTCCTTGACTGCTTTGCAC
GTTTTGGCCAACTACAAGGGCGTTGTCGCGCTCAAGTTGTACTCTCTCAA
TACGCAGCGTGCTGCCATCCTCATCGACGATTTCCTGAACCGAGACCAGG
GGATGGACCGCGCTGAGGGACAGGGCACCCAGGATAAGAAGAGAGGTGAC
AGCACAACTATCGGAAGCAGCACAACAGACTCCCCCCATCCTCTCCCTCG
ACTCCTCACTCCTACCCAAGTCATGGCACGCGAACGGATCTACCAGCCTC
TGTGGAGCTGGCTCTTGGCCCAACAACCCTGCCTAGGGAGCCGAATCAGT
GACCTCTCCCTCCCTTCCCCCGCGCACCTCTCCTTCCTCATGCGTGTCTT
TTCCCACGAAAGCTACCTGCTCACTTTCGCGCCATTTTCGGGGCGAGTAA
CTGTCATCTTTCGAGCCGGCGCCACTCCACAGGACGAGCTGAAAGCGTTC
TTTCAGGCGCAAGTGATCAAGCGCCTGGATCTGGATCGCAGGGTGGGGAA
CGGCGGGAGAGAGGCAAGTAGGGAAGCAGGAAGGGAAGCAGGGAGGGAAG
CAGGAAAATGGCCGTCGCCGCTTTTGGGGAAACTGGTCCTGAAAAGTTAC
GAAACGACGGTGCATCGCTTTCCTATCTTTTGGGCGGCGTTGCAATCGGA
AAACGGAAAGAATGAGATAGGCGGGGAGGAGCCGAGATCGGATAGGAGTG
CCGCGGGCGAGGAAGGCTGGGATCTGGGCCGTATGAACTTGGGGACCAGG
GGTTGGCGTTTGATGGAGACTGGTGAGCATCGGACGTCTAAGAAGAAGAG
CTGAGGCATTGTAGACAAAGAAACAAATATCTTACACAGGGTTCGCTCTG
GGTTTTAA back to topCoding sequence (CDS) from alignment at CM002459.1:1155283..1157140- >rna2768 ID=rna2768|Name=rna2768|organism=Nannochloropsis gaditana|type=CDS|length=3156bp|location=Sequence derived from alignment at CM002459.1:1155283..1157140- (Nannochloropsis gaditana)
ATGTGGGGCTGACACTCGACATGCTAACCGGATTGCCGAGCTTGAAAGGC
CACTTTCTGCTGCTTACCTGCTTGTCAACGGTATGCAAGACCATGTGCGG
GGTGGCGGCCGGCTGCACCAAAAGCAGCATTACCGCCCACTTTTCCCTCC
GTGGCAACATCGCCGACGTTTCTGCCAAGGAAAACGCTCAGGAAACTGCC
GTGACCTTGTTTGGGATCGTGGGCGGCCTCCTGTGCGCCCAGTGGATCGC
CTGCCCAGAAACGGCATGGCCCGTCTTCCTCTCCTTGACTGCTTTGCACG
TTTTGGCCAACTACAAGGGCGTTGTCGCGCTCAAGTTGTACTCTCTCAAT
ACGCAGCGTGCTGCCATCCTCATCGACGATTTCCTGAACCGAGACCAGGG
GATGGACCGCGCTGAGGGACAGGGCACCCAGGATAAGAAGAGAGGTGACA
GCACAACTATCGGAAGCAGCACAACAGACTCCCCCCATCCTCTCCCTCGA
CTCCTCACTCCTACCCAAGTCATGGCACGCGAACGGATCTACCAGCCTCT
GTGGAGCTGGCTCTTGGCCCAACAACCCTGCCTAGGGAGCCGAATCAGTG
ACCTCTCCCTCCCTTCCCCCGCGCACCTCTCCTTCCTCATGCGTGTCTTT
TCCCACGAAAGCTACCTGCTCACTTTCGCGCCATTTTCGGGGCGAGTAAC
TGTCATCTTTCGAGCCGGCGCCACTCCACAGGACGAGCTGAAAGCGTTCT
TTCAGGCGCAAGTGATCAAGCGCCTGGATCTGGATCGCAGGGTGGGGAAC
GGCGGGAGAGAGGCAAGTAGGGAAGCAGGAAGGGAAGCAGGGAGGGAAGC
AGGAAAATGGCCGTCGCCGCTTTTGGGGAAACTGGTCCTGAAAAGTTACG
AAACGACGGTGCATCGCTTTCCTATCTTTTGGGCGGCGTTGCAATCGGAA
AACGGAAAGAATGAGATAGGCGGGGAGGAGCCGAGATCGGATAGGAGTGC
CGCGGGCGAGGAAGGCTGGGATCTGGGCCGTATGAACTTGGGGACCAGGG
GTTGGCGTTTGATGGAGACTGGTGAGCATCGGACGTCTAAGAAGAAGAGC
TGAATGGAAACCTACCCGATAGCAACGGAGACGGACATACACAATCCTCG
GGCCCACACAGCACATTATTATGCCTCATCGTCTGCGAAAACTCTCGTTC
GCGATGATGCCCGGCATGGGCTACTCTGGCGCGCCCTTCTTGCTCCACGC
GCCTTAGGATCTTCAATCATTCATGGCATTAGTGCCACATTTTTACCCGT
TGGCTACCCATACAGTGTGCGTGAGGAGTACCTGACGTACCAGATCTGGG
ACACTGTGCAGGCATTATGCAGCTATTTGAGAGGAATTCTGACGACAAAA
GCCATTCTGGAGGGAAGTGGAGTAGGGTCTGAGGCAGCCAGTGCCCTTTC
TGCAGCCATGAATTGGGTATTTCGGGACGGCGTGGGCATGGCATGCTCCC
TCCTGTTTTCCTCGATGGCCTCAATCAGCTTCGACTGCAACGTGAAGGAG
TGGCGCCTTTTTGCTGACATATCGAACGATGTGGGGCTGACACTCGACAT
GCTAACCGGATTGCCGAGCTTGAAAGGCCACTTTCTGCTGCTTACCTGCT
TGTCAACGGTATGCAAGACCATGTGCGGGGTGGCGGCCGGCTGCACCAAA
AGCAGCATTACCGCCCACTTTTCCCTCCGTGGCAACATCGCCGACGTTTC
TGCCAAGGAAAACGCTCAGGAAACTGCCGTGACCTTGTTTGGGATCGTGG
GCGGCCTCCTGTGCGCCCAGTGGATCGCCTGCCCAGAAACGGCATGGCCC
GTCTTCCTCTCCTTGACTGCTTTGCACGTTTTGGCCAACTACAAGGGCGT
TGTCGCGCTCAAGTTGTACTCTCTCAATACGCAGCGTGCTGCCATCCTCA
TCGACGATTTCCTGAACCGAGACCAGGGGATGGACCGCGCTGAGGGACAG
GGCACCCAGGATAAGAAGAGAGGTGACAGCACAACTATCGGAAGCAGCAC
AACAGACTCCCCCCATCCTCTCCCTCGACTCCTCACTCCTACCCAAGTCA
TGGCACGCGAACGGATCTACCAGCCTCTGTGGAGCTGGCTCTTGGCCCAA
CAACCCTGCCTAGGGAGCCGAATCAGTGACCTCTCCCTCCCTTCCCCCGC
GCACCTCTCCTTCCTCATGCGTGTCTTTTCCCACGAAAGCTACCTGCTCA
CTTTCGCGCCATTTTCGGGGCGAGTAACTGTCATCTTTCGAGCCGGCGCC
ACTCCACAGGACGAGCTGAAAGCGTTCTTTCAGGCGCAAGTGATCAAGCG
CCTGGATCTGGATCGCAGGGTGGGGAACGGCGGGAGAGAGGCAAGTAGGG
AAGCAGGAAGGGAAGCAGGGAGGGAAGCAGGAAAATGGCCGTCGCCGCTT
TTGGGGAAACTGGTCCTGAAAAGTTACGAAACGACGGTGCATCGCTTTCC
TATCTTTTGGGCGGCGTTGCAATCGGAAAACGGAAAGAATGAGATAGGCG
GGGAGGAGCCGAGATCGGATAGGAGTGCCGCGGGCGAGGAAGGCTGGGAT
CTGGGCCGTATGAACTTGGGGACCAGGGGTTGGCGTTTGATGGAGACTGG
TGAGCATCGGACGTCTAAGAAGAAGAGCTGAATGGAAACCTACCCGATAG
CAACGGAGACGGACATACACAATCCTCGGGCCCACACAGCACATTATTAT
GCCTCATCGTCTGCGAAAACTCTCGTTCGCGATGATGCCCGGCATGGGCT
ACTCTGGCGCGCCCTTCTTGCTCCACGCGCCTTAGGATCTTCAATCATTC
ATGGCATTAGTGCCACATTTTTACCCGTTGGCTACCCATACAGTGTGCGT
GAGGAGTACCTGACGTACCAGATCTGGGACACTGTGCAGGCATTATGCAG
CTATTTGAGAGGAATTCTGACGACAAAAGCCATTCTGGAGGGAAGTGGAG
TAGGGTCTGAGGCAGCCAGTGCCCTTTCTGCAGCCATGAATTGGGTATTT
CGGGACGGCGTGGGCATGGCATGCTCCCTCCTGTTTTCCTCGATGGCCTC
AATCAGCTTCGACTGCAACGTGAAGGAGTGGCGCCTTTTTGCTGACATAT
CGAACG back to top
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