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Properties
| Property Name | Value |
|---|
| Product | aaa atpase domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100267g9.4721.mrna |
| Orig protein id | gnl|cribi|Naga_100267g9.4721 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1149653..1151198 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2765 ID=rna2765|Name=rna2765|organism=Nannochloropsis gaditana|type=mRNA|length=1128bp
AACACCTGCCTCCGTACGATGCTGCCTGTCTGACGTCCCATTCAACGTTT
TTTCCTCGCACAGGTACATACATGCGATGCGTACATAGGGACGGAGGAGA
GCTACGTCGCGCCCCGTGCTCAAACCCTCCCATAGCCTTAGCCTTATAAT
TGACGTTGCCCTGTGGGCATTGCCGCGTGAACTTCAGCAGCCATGTCTTC
TCCTCCTCCCACCACAACATCACCATCACCGCCTTCCTCTCGACCAAGCA
GCGCCTGCGAAGGTGCCTTGCCGCAACTTAGTATATTTTCCTCCTCCACT
GCCGCCAGCAAGGTTGCGCCTATCACCGGAGACTCCCAGACTGCCCGCAG
ACGCGTCCACATCCCGTCCTCTTTTTACGGCCCTTCCAATCCCATTCAGG
ACTCTTCCTCCTCCTCCACCTCCTTTCTCAGCAACACCGACGAGGCTGAG
CATACGTTCCTGGCCAGACTGTTGCCGCAACCTGTGCGCAATCCTCCCTT
AGCACCCAGCGACGCCGTCCCTCTCGCCCCGCCCGCTCTCAGCCCCCCCC
CTTATACCGCCGACCGCAAGCCTTCCCAGGCTGCCTGCACTATGCTCCGG
GATCCGATGACGGAAGTGGCAACCCGCACCAGGTCCTTGGCGCGGCTTGG
GATGGTGAGTGGGGCCTGGATCACTTTGACCTCGGTGGAGGAGAGAGGGA
AGGGAATGAGGTGGTGTGGTGAGAGCGGGGGCGCGGCGACAGGCACGGAA
GCATGGGACGCCGGAGGAGGAGGGGAAAGGGTGTGTCGGATCGTCGCCAT
GGACAAAGACGAGGTGCTGGCGGTGGTGCTTCGGCAGAAGGAGGAGGAGG
CGGCGGCGGCGGAGGAGAGAGGAACGGGTGGGAAGGAGGGGGATGGAGGG
AGGAAGGGGACGCAGGGGGAGGAGGTGGAAGAGGAGGACGTGCTTTATGT
CCCCCCCCTTCTGCTCTTCAACGCCACGGGCAGCCTGCGTCCTTGTCGCT
TCCGCGTCCGACGCTTCTCCTCCGCCCCGGCCTCCGTCCCCCCCTCCGCC
CCCCCCTCCGCCCCCTCCCTTCCCCGCCCCCCCTTGGCCGGCCATGCTGT
CATCGCCCCCGTCAAAAAACCCCGATAG back to topprotein sequence of rna2765 >rna2765-protein ID=rna2765-protein|Name=rna2765|organism=Nannochloropsis gaditana|type=polypeptide|length=388bp
WALPALTTPSSTHRTHRLPPSLPPSLPPSLPPSLPQRYSPPGVKRRAGIL
LYGPPGTGKTLLAKAVATECGLAFLSVKGPELLDMYVGESERNVRQAFAR
ARAAAPAVLFFDELDSLAPQRGRGSDSGGVMDRVVAQLLVELDAVSSGER
GGEGGREGETGRQDVFVIGATNRPDLLDSSLLRPGRFDRLLYLGNTTDAG
SRRAILQAATRKFPFGEDVDLSDVVSRLPPNFTGADFSAVAAQALMRALR
RRVAELEEELAVLNEGGEEGKEGGTGGGKLSLGTFLSHLSPEECVARVYQ
EDLLEAATKVAPSVAAEELAHYERLRLQFSSTHAAAGLSQEGSVAIRGGG
KGGGMEALPVEVGERTGFLNGKGERGGGREGRKGGSSE back to topmRNA from alignment at CM002459.1:1149653..1151198+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2765 ID=rna2765|Name=rna2765|organism=Nannochloropsis gaditana|type=mRNA|length=1546bp|location=Sequence derived from alignment at CM002459.1:1149653..1151198+ (Nannochloropsis gaditana)
TGGGCCCTGCCTGCCTTGACCACCCCGTCGTCGACCCATCGCActcatcg
tcttcctccctccctccctccctccctccctccctccctccctccctccc
tcccccagagGTATTCACCGCCGGGGGTCAAGCGACGCGCAGGGATCCTG
TTGTACGGGCCACCAGGGACGGGCAAGACCCTCTTGGCGAAGGCAGTGGC
CACGGAATGcggcctcgccttcctctccgtgAAGGGACCGGAGCTCTTGG
ACATGTACGTTGGGGAGAGCGAACGGAACGTGCGTCAAGCGTTTGCccgg
gcccgggcggcggcgcctgCCGTCTTGTTCTTCGACGAGTTGGACTCCTT
GGCCCCGCAGCGGGGCCGCGGTAGCGACAGTGGAGGGGTGATGGACCGGG
TGGTGGCGCAGCTGCTGGTGGAACTGGATGCGGTCTCCtcgggggaaaga
gggggggaaggagggcgggagggagaaacggggAGACAGGACGTCTTTGT
CATCGGTGCGACGAACCGCCCGGACCTCTTGgattcctccttgctgcgcC
CCGGCCGCTTCGACCGACTCTTGTACCTGGGGAATACCACCGACGCGGGC
AGCCGACGCGCCATCCTGCAGGCGGCGACCCGGAAGTTTCCCTtcggcga
ggacgtggattTGTCCGACGTGGTTTCCCGACTTCCCCCGAATTTTACTG
GGGCCGACTTttccgccgtggccgcccaGGCTTTGATGCGGGCATTGCGC
CGGCGGGTGGCtgaattggaggaggagctggcggtcttgaatgagggagg
ggaggaggggaaggagggtgggacggggggagggaagttgAGCCTGGGGA
CGTTTTTGTCGCATTTATCCCCCGAAGAATGCGTGGCGCGGGTCTACCAG
GAAGATCTCTTGGAGGCCGCCACGAAAGTCGCCCCCTCCGTGGCCGCAGA
GGAGCTGGCCCATTACGAAAGGCTTCGGCTTCAATTCAGCAGCACGCATG
CCGCGGCGGGGCTCTCACAGGAAGGCAGCGTGGCGAtccgtggaggggga
aaggggggagggatggaggcacTCCCCGTGGAAGTGGGGGAAAGGACAGG
ATTTCTgaacgggaagggggaaagagggggagggagggaagggaggaagg
gcgggtcaTCAGAATGAagtgagggaaggaacgTTTCCGGTAGATAGCAC
GTGCACGGGGGGCGATATCGTcggcgagaggaaggtggcgaTGAGGATGC
TTGTGAGGGGGTAGGGACATGGCCGCCGGAGAGACCGGGGCCCCATGCTC
TCCCAATGGAGCTGATCCTGTCGGTGATTACCGTAAGGACGACAAGGACT
GCGAGGGTGCTCAGGCCTGACGTCGGTGATATTCGGCCAAAAACGGTGGG
GCGCTTCTCCGGATTCCCGGGATGTGCGAGGCGTTTGGGACGGAGGCAAT
GTCCTCGGATCCAAAGTAACGAAATGAACGTACGATATGCAGGCACGCAT
CCTTGGCGATGCCTCATGGACGCGTCGACGGTTGTGTTACACATTT back to topCoding sequence (CDS) from alignment at CM002459.1:1149653..1151198+ >rna2765 ID=rna2765|Name=rna2765|organism=Nannochloropsis gaditana|type=CDS|length=1167bp|location=Sequence derived from alignment at CM002459.1:1149653..1151198+ (Nannochloropsis gaditana)
TGGGCCCTGCCTGCCTTGACCACCCCGTCGTCGACCCATCGCActcatcg
tcttcctccctccctccctccctccctccctccctccctccctccctccc
tcccccagagGTATTCACCGCCGGGGGTCAAGCGACGCGCAGGGATCCTG
TTGTACGGGCCACCAGGGACGGGCAAGACCCTCTTGGCGAAGGCAGTGGC
CACGGAATGcggcctcgccttcctctccgtgAAGGGACCGGAGCTCTTGG
ACATGTACGTTGGGGAGAGCGAACGGAACGTGCGTCAAGCGTTTGCccgg
gcccgggcggcggcgcctgCCGTCTTGTTCTTCGACGAGTTGGACTCCTT
GGCCCCGCAGCGGGGCCGCGGTAGCGACAGTGGAGGGGTGATGGACCGGG
TGGTGGCGCAGCTGCTGGTGGAACTGGATGCGGTCTCCtcgggggaaaga
gggggggaaggagggcgggagggagaaacggggAGACAGGACGTCTTTGT
CATCGGTGCGACGAACCGCCCGGACCTCTTGgattcctccttgctgcgcC
CCGGCCGCTTCGACCGACTCTTGTACCTGGGGAATACCACCGACGCGGGC
AGCCGACGCGCCATCCTGCAGGCGGCGACCCGGAAGTTTCCCTtcggcga
ggacgtggattTGTCCGACGTGGTTTCCCGACTTCCCCCGAATTTTACTG
GGGCCGACTTttccgccgtggccgcccaGGCTTTGATGCGGGCATTGCGC
CGGCGGGTGGCtgaattggaggaggagctggcggtcttgaatgagggagg
ggaggaggggaaggagggtgggacggggggagggaagttgAGCCTGGGGA
CGTTTTTGTCGCATTTATCCCCCGAAGAATGCGTGGCGCGGGTCTACCAG
GAAGATCTCTTGGAGGCCGCCACGAAAGTCGCCCCCTCCGTGGCCGCAGA
GGAGCTGGCCCATTACGAAAGGCTTCGGCTTCAATTCAGCAGCACGCATG
CCGCGGCGGGGCTCTCACAGGAAGGCAGCGTGGCGAtccgtggaggggga
aaggggggagggatggaggcacTCCCCGTGGAAGTGGGGGAAAGGACAGG
ATTTCTgaacgggaagggggaaagagggggagggagggaagggaggaagg
gcgggtcaTCAGAATGA back to top
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