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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100285g10.3539.mrna |
| Orig protein id | gnl|cribi|Naga_100285g10.3539 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1147690..1148817 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2764 ID=rna2764|Name=rna2764|organism=Nannochloropsis gaditana|type=mRNA|length=1556bp
CAGATGCAACCTACATTCGCTCCTTTTAACAGGCCGATTGCGTCCAGACC
AATGCCTAAGAAGAGATTGCCTTCAAAGAAGGCGGCATTGATGACGGGGG
GGAAGAAACGGTATCCCAGCACCACGGCGCCGGATCCTGCGGCTGGTACA
CACAGCTCCTATACCCGTGATGGTGCTCCGTCGATTAACGCGAGCTGTCA
TGGGAATAAGCCTCTGCCCGCTGCTGAAACTAAAACATCCTTGACTCCGG
AATCTCAAATAAAACGGAAGCGTGGTCGGAGGAACAGGAAAAACGCGAAA
TTAGCGTCGAGCGCTCCAAATGAAGTGCTCCTGGCAACCTCCTCCCCTAT
CCCCTCTTTTGCCGCTACCATTCTGGGAGCTGGGCCGGTCAGCCCACCCC
CGACTTCCTCTGTCAACTCACAATCTACCTCCTCAAAATCCAGAAAGAGG
AAGAAGAGGCATCCTGTGAACGCGGGAATCTCGTCTTCGTCCTCGCACTT
GGTTTCCCTTGCCCATCCTCAAAATCATCCGTCGTCAGAGGTAGCCCTGA
AAAGGGTGTCTCCATCGTCATCTGGCCCAGTTCTTAGTGCCCTTCAAGCG
AAAATGAAAGCCAGGCTGGAAGGAGCGCGCTTTCGCGATATCAATGAGAT
GCTGTACACCTCCCGTGGCGACCATGCCCTTACCACGTTCAAAAACGAGC
CCGCTCTCTTTGAAGCGTACCACAAAGGCTTTCGGGAGCAAGTCCAGAAG
TGGCCCCGGAACCCCCTAGACGATATTATCGCATGGGTGCGCAGGCAGCC
ACGGACGCACACTTTTGCCGATTTTGGCTGTGGAGAGGCTCGTCTGGCGG
CCTCCTGCCCCCACCATACGGTCCACTCATTCGACCTGGTAGCTCCTGGG
GGGGAGGAGGCAGGGAGGGCGGGGACAGTGATTGCTTGCGACATGGCAAA
CGTCCCACTGCCGTCGGAGAGCGTCCACGGGGTGATTTTCTGTCTGTCAC
TCATGGCTACGAACATGATGGATTCCCTTCGGGAGGCCGTACGCGTGTGC
GTGGAAGGAGGGGTGGTCAAGGTGGTGGAGGTCCGAAGCCGGTTCGAGGG
GCAAGGCGAAGCGGAGGAGGGAGGAAAGGGAGGGAAAGAAGGTGGGGGAG
GTGGAATCGAGAAATTTGTGGCAGCCTGCCAGGCGTTGGGCTTAGCGTGC
AAACGGCTGGACAGGACGAACAAGATGTTTTTCCTGGTCGATTTCGTCAA
GGTGGGGAAGGAGAAGGAGACGGGGGGGAAAGGGCAGAAAAGAAAAGGAG
CAGCGTCTGGTTCCGCACCGGGAAACGTCACGGAGAAAGGGAAGGAGAAA
ATTAGGCGAGGTGGGAAACGTGGTGGGGGTGAACAGGGCAAAGGGAGTGG
GCAAGGGTCAGATATGAAAGCGGGACCCGGGTCCCCCAGAGCGGGAGGAC
GGGGGAAAGGCGGGAAGGAGGATGGGAAGCCGCCGGACTTTCGCGCCAAA
CCCTGCCTATATAAACGCCGATAAGGTCGGCTGCATGTAAAAGAGGCATT
CGCACA back to topprotein sequence of rna2764 >rna2764-protein ID=rna2764-protein|Name=rna2764|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MSSPPPTTTSPSPPSSRPSSACEGALPQLSIFSSSTAASKVAPITGDSQT
ARRRVHIPSSFYGPSNPIQDSSSSSTSFLSNTDEAEHTFLARLLPQPVRN
PPLAPSDAVPLAPPALSPPPYTADRKPSQAACTMLRDPMTEVATRTRSLA
RLGMVSGAWITLTSVEERGKGMRWCGESGGAATGTEAWDAGGGGERVCRI
VAMDKDEVLAVVLRQKEEEAAAAEERGTGGKEGDGGRKGTQGEEVEEEDV
LYVPPLLLFNATGSLRPCRFRVRRFSSAPASVPPSAPPSAPSLPRPPLAG
HAVIAPVKKPR back to topmRNA from alignment at CM002459.1:1147690..1148817+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2764 ID=rna2764|Name=rna2764|organism=Nannochloropsis gaditana|type=mRNA|length=1128bp|location=Sequence derived from alignment at CM002459.1:1147690..1148817+ (Nannochloropsis gaditana)
AACACCTGCCTCCGTACGATGCTGCCTGTCTGACGTCCCATTCAACGTTT
TTTCCTCGCACAGGTACATACATGCGATGCGTACAtagggacggaggaga
gctACGTCGCGCCCCGTGCTCAAACCCTCCCATAGCCTTAGCCTTATAAT
TGACGTTGCCCTGTGGGCATTGCCGCGTGAACTTCAGCAGccatgtcttc
tcctcctcccaccacaACATCACCAtcaccgccttcctctcgacCAAGCA
GCGCCTGCGAAGGTGCCTTGCCGCAACTTAGtatattttcctcctccact
gccgccaGCAAGGTTGCGCCTATCACCGGAGACTCCCAGACTGCCCGCAG
ACGCGTCCACATCCCGTCCTCTTTTTACGGCCCTTCCAATCCCATTCAgg
actcttcctcctcctccacctcctttctcaGCAACACCGACGAGGCTGAG
CATACGTTCCTGGCCAGACTGTTGCCGCAACCTGTGCGCAATCCTCCCTT
AGCACCCAGCGACGCCGTCCCTCTcgccccgcccgctctcagcccccccc
cttatACCGCCGACCGCAAGCCTTCCCAGGCTGCCTGCACTATGCTCCGG
GATCCGATGACGGAAGTGGCAACCCGCACCAGGTCCTTGGCGCGGCTTGG
GATGGTGAGTGGGGCCTGGATCACTTTGacctcggtggaggagagaggga
agggaatgaggTGGTGTGGTGAGAGCGGGGGCGCGGCGACAGGCACGGAA
GCATGggacgccggaggaggaggggaaagggtgtgTCGGATCGTCGCCAT
GGACAAAGAcgaggtgctggcggtggtgcttcggcagaaggaggaggagg
cggcggcggcggaggagagaggaacgggtgggaaggagggggatggaggg
aggaaggggacgcagggggaggaggtggaagaggaggacgtgctttatgt
ccccccccttctgctCTTCAACGCCACGGGCAGCCTGCGTCCTTGTCGCT
TCCGCGTCCgacgcttctcctccgccccggcctccgtccccccctccgcc
cccccctccgccccctcccttccccgcccccccttggcCGGCCATGCTGT
CATCGCCCCCGTCAAAAAACCCCGATAG back to topCoding sequence (CDS) from alignment at CM002459.1:1147690..1148817+ >rna2764 ID=rna2764|Name=rna2764|organism=Nannochloropsis gaditana|type=CDS|length=936bp|location=Sequence derived from alignment at CM002459.1:1147690..1148817+ (Nannochloropsis gaditana)
atgtcttctcctcctcccaccacaACATCACCAtcaccgccttcctctcg
acCAAGCAGCGCCTGCGAAGGTGCCTTGCCGCAACTTAGtatattttcct
cctccactgccgccaGCAAGGTTGCGCCTATCACCGGAGACTCCCAGACT
GCCCGCAGACGCGTCCACATCCCGTCCTCTTTTTACGGCCCTTCCAATCC
CATTCAggactcttcctcctcctccacctcctttctcaGCAACACCGACG
AGGCTGAGCATACGTTCCTGGCCAGACTGTTGCCGCAACCTGTGCGCAAT
CCTCCCTTAGCACCCAGCGACGCCGTCCCTCTcgccccgcccgctctcag
cccccccccttatACCGCCGACCGCAAGCCTTCCCAGGCTGCCTGCACTA
TGCTCCGGGATCCGATGACGGAAGTGGCAACCCGCACCAGGTCCTTGGCG
CGGCTTGGGATGGTGAGTGGGGCCTGGATCACTTTGacctcggtggagga
gagagggaagggaatgaggTGGTGTGGTGAGAGCGGGGGCGCGGCGACAG
GCACGGAAGCATGggacgccggaggaggaggggaaagggtgtgTCGGATC
GTCGCCATGGACAAAGAcgaggtgctggcggtggtgcttcggcagaagga
ggaggaggcggcggcggcggaggagagaggaacgggtgggaaggaggggg
atggagggaggaaggggacgcagggggaggaggtggaagaggaggacgtg
ctttatgtccccccccttctgctCTTCAACGCCACGGGCAGCCTGCGTCC
TTGTCGCTTCCGCGTCCgacgcttctcctccgccccggcctccgtccccc
cctccgcccccccctccgccccctcccttccccgcccccccttggcCGGC
CATGCTGTCATCGCCCCCGTCAAAAAACCCCGATAG back to top
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