rna2760, rna2760 (mRNA) Nannochloropsis gaditana

Overview
Namerna2760
Unique Namerna2760
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length597
Alignment locationCM002459.1:1137018..1139876 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100285g6.3545.mrna
Orig protein idgnl|cribi|Naga_100285g6.3545
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1137018..1139876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100285g6gene2641Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27924.1cds2752Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2760rna2760-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2760 ID=rna2760|Name=rna2760|organism=Nannochloropsis gaditana|type=mRNA|length=597bp
ATGCCGGACGATGCAGGGGGTTTGTCGGTGCAGACATGGGAGTGCAGGCG
AAGAGGGTGGGAAGAGGAAAAGCAGGGACGGGGAACGCAGGCAATGGCTA
CCGCCAATGCGGTTATCCATGAGCGTAGGATGAGGAATAACGCGAAGAAC
AAGGTCGAGGACGTTTATACGGGCGTCGTTAAGATGGTAAGCGCATCAGG
GACGACTGCGGGATGCCTCCAATTCGTAGAGGTGTGGCGAGGATCATCGC
ATGAGTACCATACATGGAAAAGGACTACTCCGATTGTGGGAAGACCCTTC
ATAACGAGAAGTGTCGGGAGGATGATAATGAGTATCATGAGGACGAGCAA
TGTGCCAATGACGATCGTGAGATTTTCTCATCGTTGTATGACGATAGATC
ATCGAGGAGTGATAAGATGGAGTTGGTTGACCTTAATCGGAGCTGTCTTA
CATTTAAATGTTTCTGGTAGAGTTTGGAAGAAAAGCACGCATAAGAGAGG
ACGAAAAAGGCGTGAAATGAACTCGTGGCCATTTTCTAATTCACATGCTC
CTGTCGTAACCGGTGAGAAGAGACACTGTGGAGAAACAAAGCGATAG
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protein sequence of rna2760

>rna2760-protein ID=rna2760-protein|Name=rna2760|organism=Nannochloropsis gaditana|type=polypeptide|length=486bp
MAPAGSEGCKEEDFVLLDKSEAVSAQLQDDSLARGGSARVVEYELASFRR
TLSSITDDASYARRGDEDFETEGNEEDTDDLSLEDMPEDLRGLCRRLRAQ
SRALDAEERRETGTVLGEGGSGLKDNEGVGDWGQGESRRHRQQVRRRHPQ
AEACLFEALWRFSWPLGTRDILIAALLVVFMTTLISLSGGRHTRAVPLAA
NRRGSEGERSAPPLYVFDDVASAVATAAAFPGHCASWAFPSARSHAHEKA
SSPPLPVKISLLEGRVRALVSMVGDLEKEVAWRKALQEGLEREVEGWEKK
ARNLEAELRVARESMEEGREGGREGAGRDERVRLTVVPEVHTIKEGGDEE
ERTETRAPERAYWWGSEVLNWGSDNSLPRGLTTGLKEGGREGGREGGGAA
VPSPDICPCDVWEMSMCTDEGDWEVEEWEWWSENDEEWWSEDDEEWWSED
EEEEEEEDGMEEGVAGLECPLPESYLWAKAEVAGRT
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mRNA from alignment at CM002459.1:1137018..1139876-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2760 ID=rna2760|Name=rna2760|organism=Nannochloropsis gaditana|type=mRNA|length=2859bp|location=Sequence derived from alignment at CM002459.1:1137018..1139876- (Nannochloropsis gaditana)
AAAATCAATGACCTCGGCACCAAGATTCTCAGACGCCTGATGTTTATGTG
TGCAACACGGCACAATTGGACACTGGAACCTCGGGGTGCAAGCGTTTGGG
GTCGTGAAAGCAGGCATAGTCAAGCTTGAGGCATGCTCCTGCTTCAATGT
CCGTCACGTTCAAGAAAATGCATGTTCATTGCACAGCTTGTCTGGCATCC
AAAAATGTGCTTTTCCACGACAATATTCGTAACCAACGCAAAAATTTAAA
TCTTGGTACAGTTAAGAACCTTTATTGATCAGATATTCTCGTTTGTATGT
CTCAAAACGCGGAACTTTACCTTTACCCCTCGGGAGCGTCAGGCAAGAAG
ATACGATCATACGCGGCTCCAAGAAATTGACCCAGATTTACTTGATGTGC
TTATCACTTAAACACCCTGATTGCTTGTCACACATACTTTAGAAATATTG
TCAAGACAGAAGCGTGGTGACGCTGGCGAAGTTCTGGTCCCAAGTCTCTT
GAATTTTACTTGTCGTCCAGGGTGTACCTCCCTGCACTATCTTTTTGATC
CGATTCTTGGTCTTTTCTAACATGGCACCTGCTGGAAGTGAGGGATGCAA
GGAGGAAGATTTTGTCCTTTTGGATAAATCGGAAGCAGTCTCCGCGCAAT
TGCAAGATGATTCCCTTGCCCGTGGGGGGTCTGCCCGAGTGGTCGAATAT
GAATTGGCCTCATTCCGGCGCACCCTCTCCTCCATCACCGACGACGCTTC
CTACGCGCGACGGGGGGACGAGGACTTTGAAACCGAAGGAAATGAGGAAG
ATACCGACGATCTGTCCCTGGAGGACATGCCCGAGGATTTGCGTGGCTTG
TGCCGCCGTCTGCGGGCACAAAGCCGTGCCCTGGACGCGGAGGAGCGAAG
GGAGACGGGCACCGTCCTTGGGGAAGGGGGATCCGGGCTCAAGGATAATG
AAGGCGTGGGAGACTGGGGACAGGGAGAAAGCCGTCGGCATCGTCAGCAG
GTGCGCCGGCGCCACCCGCAGGCGGAAGCATGTCTTTTCGAGGCCTTGTG
GCGCTTCTCCTGGCCTTTGGGGACCCGGGACATCCTCATTGCGGCCCTTT
TGGTCGTGTTTATGACCACACTCATTTCTTTGAGTGGGGGCCGACACACG
CGGGCAGTGCCCTTGGCTGCGAACAGGCGGGGAAGCGAGGGGGAACGAAG
CGCACCTCCCTTGTACGTTTTTGACGACGTGGCCTCGGCTGTGGCCACCG
CCGCCGCCTTTCCAGGCCATTGTGCATCCTGGGCCTTCCCGTCTGCCCGC
TCCCATGCCCACGAGAAAGCGTCCTCCCCGCCGCTCCCTGTGAAGATATC
CCTGCTGGAAGGGAGAGTGCGGGCGTTGGTGTCGATGGTGGGGGACTTGG
AGAAGGAGGTGGCGTGGCGGAAAGCCCTGCAAGAAGGGCTGGAGCGGGAG
GTGGAGGGGTGGGAGAAAAAGGCGCGAAACTTGGAGGCGGAGCTGCGCGT
GGCCCGGGAGAGCATGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGCGG
GGCGGGACGAACGGGTCAGGCTGACCGTCGTCCCTGAGGTGCACACCATA
AAGGAAGGAGGAGATGAGGAAGAACGGACAGAGACGAGGGCGCCGGAGCG
TGCCTACTGGTGGGGTTCGGAAGTACTGAACTGGGGCAGCGACAACAGCC
TTCCCCGCGGTTTGACGACGGGCTTGAAGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGGAGCGGCCGTGCCGTCTCCCGACATTTGTCCCTGCGA
TGTGTGGGAAATGAGCATGTGCACAGACGAGGGAGACTGGGAGGTTGAGG
AATGGGAATGGTGGAGCGAGAACGATGAGGAATGGTGGAGCGAGGACGAT
GAGGAATGGTGGAGCGAGGACGAGGAGGAGGAAGAAGAGGAGGACGGGAT
GGAGGAAGGGGTAGCGGGCCTGGAATGTCCACTCCCTGAGTCGTATTTGT
GGGCAAAGGCCGAGGTAGCCGGTCGGACGTGAGAAGAGGATTGGGCGAAG
GGGAGCCTGGAGGGGCCCCGCGCTGGCCCCGCAGGGTCAGGGGGCAGGGA
GAGGGAGGGAGGGCGAGGAGAAGGGTGGACGAAAGATCCTCCACTGCACA
GTGAGGGTGCGTGTGGGTCGTGTCAGTCCAGGTTGGGAAGCGGGTTGATG
TAGGGAGGTGGGAAGAGGGCTTCAGGGGTATGCGATGGGCACGGCGGGAC
GGGCGTCTGCGATGGAATGTGGAGGCCGCATGCACCTCGGGACCGCGACG
AGGACCGGGTGGAGCATGGGGACGACAGCCAAGTAGTGTGTAAAGACGGG
TAAATACAGCCTTTGAGGCTTCCGAGATTGGGACGAAAAGGAGTCAATGG
AACGGGAGAAGAAGGAGGCGTCGAGGAAAGGGAGGAAAAGTTGTGAGAGC
GTCTGTGTGATCGCAGGGTTAGAGTCCAGCTGAGATCTCAATGCGTTCGT
TTTCTCAGTGTCATGCGTTTAAAGGTTGGTAGAGATAATAGGAATGGTTG
GGTAGCTGGCCAGAAAAGGCGCTTAGAGTGAGCGCCAGGGAGGGAGGGCC
ATGGTTGATTGGGGGAAAGCCCCAGCCGGGAAAAGAAGAGAAGTACATAC
AAACAAAAGGGTTATGAGGACGAGGGGAGGCACATTTAGAGAAACGAGTG
GCTCCATCCTTCTCACAAGCCTTTGGATGTTCGCGACAGGATTGCTGCGG
GAATGTCGAGAAGAGGGGAAGGACAGAGAGACGTACATAAGACCCGTGCC
CATAAAAAGCACTGAGAAATGCGATTGGGAGTCGCGAAATGAGCAGGTCA
CGAGGTTTA
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Coding sequence (CDS) from alignment at CM002459.1:1137018..1139876-

>rna2760 ID=rna2760|Name=rna2760|organism=Nannochloropsis gaditana|type=CDS|length=1461bp|location=Sequence derived from alignment at CM002459.1:1137018..1139876- (Nannochloropsis gaditana)
ATGGCACCTGCTGGAAGTGAGGGATGCAAGGAGGAAGATTTTGTCCTTTT
GGATAAATCGGAAGCAGTCTCCGCGCAATTGCAAGATGATTCCCTTGCCC
GTGGGGGGTCTGCCCGAGTGGTCGAATATGAATTGGCCTCATTCCGGCGC
ACCCTCTCCTCCATCACCGACGACGCTTCCTACGCGCGACGGGGGGACGA
GGACTTTGAAACCGAAGGAAATGAGGAAGATACCGACGATCTGTCCCTGG
AGGACATGCCCGAGGATTTGCGTGGCTTGTGCCGCCGTCTGCGGGCACAA
AGCCGTGCCCTGGACGCGGAGGAGCGAAGGGAGACGGGCACCGTCCTTGG
GGAAGGGGGATCCGGGCTCAAGGATAATGAAGGCGTGGGAGACTGGGGAC
AGGGAGAAAGCCGTCGGCATCGTCAGCAGGTGCGCCGGCGCCACCCGCAG
GCGGAAGCATGTCTTTTCGAGGCCTTGTGGCGCTTCTCCTGGCCTTTGGG
GACCCGGGACATCCTCATTGCGGCCCTTTTGGTCGTGTTTATGACCACAC
TCATTTCTTTGAGTGGGGGCCGACACACGCGGGCAGTGCCCTTGGCTGCG
AACAGGCGGGGAAGCGAGGGGGAACGAAGCGCACCTCCCTTGTACGTTTT
TGACGACGTGGCCTCGGCTGTGGCCACCGCCGCCGCCTTTCCAGGCCATT
GTGCATCCTGGGCCTTCCCGTCTGCCCGCTCCCATGCCCACGAGAAAGCG
TCCTCCCCGCCGCTCCCTGTGAAGATATCCCTGCTGGAAGGGAGAGTGCG
GGCGTTGGTGTCGATGGTGGGGGACTTGGAGAAGGAGGTGGCGTGGCGGA
AAGCCCTGCAAGAAGGGCTGGAGCGGGAGGTGGAGGGGTGGGAGAAAAAG
GCGCGAAACTTGGAGGCGGAGCTGCGCGTGGCCCGGGAGAGCATGGAGGA
AGGGAGGGAGGGAGGGAGGGAGGGAGCGGGGCGGGACGAACGGGTCAGGC
TGACCGTCGTCCCTGAGGTGCACACCATAAAGGAAGGAGGAGATGAGGAA
GAACGGACAGAGACGAGGGCGCCGGAGCGTGCCTACTGGTGGGGTTCGGA
AGTACTGAACTGGGGCAGCGACAACAGCCTTCCCCGCGGTTTGACGACGG
GCTTGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGCGGCC
GTGCCGTCTCCCGACATTTGTCCCTGCGATGTGTGGGAAATGAGCATGTG
CACAGACGAGGGAGACTGGGAGGTTGAGGAATGGGAATGGTGGAGCGAGA
ACGATGAGGAATGGTGGAGCGAGGACGATGAGGAATGGTGGAGCGAGGAC
GAGGAGGAGGAAGAAGAGGAGGACGGGATGGAGGAAGGGGTAGCGGGCCT
GGAATGTCCACTCCCTGAGTCGTATTTGTGGGCAAAGGCCGAGGTAGCCG
GTCGGACGTGA
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Synonyms
Publications