rna276, rna276 (mRNA) Nannochloropsis gaditana

Overview
Namerna276
Unique Namerna276
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1068
Alignment locationCM002455.1:699017..700002 +

Link to JBrowse

Properties
Property NameValue
Product14-3-3-like protein
Orig transcript idgnl|cribi|Naga_100026g40.10671.mrna
Orig protein idgnl|cribi|Naga_100026g40.10671
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:699017..700002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100026g40gene265Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna276rna276-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30417.1cds276Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna276 ID=rna276|Name=rna276|organism=Nannochloropsis gaditana|type=mRNA|length=1068bp
ATGGAACAGGCGAGCCCTCCCAAATACAACTCATCTCACCGCCTTTCCAT
TCAACCTGCCCGGGAAAGGGGGGGGCTGGGCACGCCTGGAGGGAGAGAGC
ACACATATTTCGCGAAAAGGAATCCGCTTTCCCAGGCGCCCGTGCGAGCG
AGGCTCCCGGTCCACAACCACGGCACATACCCGTCCCTGCCCACGCCTGC
GCCGCGTCCTTGCTCTTGCTGTCATAGGGTCGATAACTCCATCATCCTTT
CTGCCTTTCGTCTGATTTTAATACGCTAGGAAACCTAGCCCTCCATCATT
CGTGGTAGCGCTTGATGGACTCACCACCGCCAAGAAAGGATTACTACTCA
GTGCTCGGCGTTCCTCGTGACTCGAGCGATGAAGCAATAAAAGCTCGATA
CAGGCAGCTTGCGATGGATTTGCATCCAGATCGGTGTGCAGCAGGCGATT
CAAGCTCTGTAGAGCGTTTTAAAGCAGTTTCAGAGGCCTACAAAGTGCTT
TCAGATAGTGGTCAGCGACGTATCCTGGACGAGTACTTGGAAGGTAGGAG
GTTTGCTGGTGCTCGTCTTCGGGGAGATGAGGGATTTTTGGACCGCTTGG
CTGGGATTCGAAGACCACGACCACCCCCAGGGTCACGTAAGGGTGGATTT
TCCTCCTCCCGGGCCTTCCATCTCGTTGAAATCGCACTTTCTCCCCGTGT
GCTGGTCATGGGGATTGGGTTGGCATTTATGACCTACATTGCTTTGGGAC
CCCGCGAAGACCGTGGGCATTCAAACGATTTGCTGGTACCGGCGTGGTAC
AATCAAAGAACAAAGCGGTGGGAGACTCCTGCCCCGTGGAATCCTGACTA
CAGGGCAGCCGGCAGCGAACATCATGCCAAGGTTTCTAAGTATCATGTTT
TTGAGTCAGCACCACCTGCATCGAGAAGGATGGGCGGTGCAGGGTCGAAT
GATCCGGTGTAAATAGTAGTGTAGGTGCGCTCTGTCAGTTTTGCATGTAT
AGGATTGATCGGGAGGAAACAACAGGTGCAAGAAGATAAGAAAAGACAAA
AGACAAAGCATTTGACCC
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protein sequence of rna276

>rna276-protein ID=rna276-protein|Name=rna276|organism=Nannochloropsis gaditana|type=polypeptide|length=250bp
MDSRDSLVYKAKLAEQAERFDEMVDHMKAVAQQPQELSVEERNLLSVAYK
NVIGSRRASWRVISSIEQKGEQERLPLIREYKAKIEDELLEICNDILNII
ETELIPNSTSEEGKVFYFKMKGDYHRYLAEFQVGEKRRESSDAALSAYKC
ATDIAEHDLPPTHPIRLGLALNFSVFFYEIYNSPDRACALAKKAFDDAIA
ELDTLSEESYKDSTLIMQLLRDNLTLWTSDQNEADEAGANNEDGNRVEDL
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mRNA from alignment at CM002455.1:699017..700002+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna276 ID=rna276|Name=rna276|organism=Nannochloropsis gaditana|type=mRNA|length=986bp|location=Sequence derived from alignment at CM002455.1:699017..700002+ (Nannochloropsis gaditana)
ATGGATTCGCGGGACTCATTGGTTTACAAGGCCAAACTGGCGGAGCAAGC
CGAGCGATTCGACGAGATGGTCGACCACATGAAGGCCGTGGCCCAACAGC
CTCAGGAGCTTTCTGTCGAGGAGCGCAATCTTCTCTCCGTGGCGTACAAA
AACGTGATTGGGTCCCGTCGAGCCTCTTGGCGCGTAATTTCCTCCATCGA
ACAGAaaggggagcaggagcgtcTGCCCCTGATTCGTGAGTACAAAGCCA
AGATTGAGGACGAGCTGCTGGAGATTTGCAACGACATTTTGAATATAATA
GAGACGGAGCTCATCCCGAACTCGACTTCTGAGGAAGGCAAGGTATTCTA
TTTCAAGATGAAGGGTGACTATCATCGTTACTTGGCAGAGTTCCAGGTGG
GCGAGAAGCGACGCGAGTCCTCGGACGCGGCCCTTTCCGCCTACAAGTGC
GCCACAGACATCGCCGAGCACGATTTGCCTCCCACACACCCGATCCGCTT
GGGCCTGGCCTTGAATTTTTCGGTCTTCTTCTATGAGATATACAACAGCC
CGGTAAGTAGAATGTGGCTTTGCGAAGACCGGGTCGGCTGAAGAAAGATG
ATGTTGGGAGGTGGAATGATAGAAAATAGGCCCTTGAACAGAAGAAAATG
TTTGGCGCGGAGATGGTGGTTTCTGGCAAGAGGGTGACAGAGGGCGAGAT
GACGTCTTTGTACAGCAAATATGCAGGGCCCATGCTCACGGTTTCTCCGC
CGCATTTTTCGCTCGCGTTATCACTCTAAATCCAGGATCGAGCCTGCGCA
TTGGCGAAGAAAGCTTTCGATGACGCGATCGCTGAACTGGACACTCTCTC
GGAGGAGAGCTACAAGGACAGCACCCTGATCATGCAGTTGCTTCGCGACA
ACCTGACGCTCTGGACTTCGGATCAAAacgaggcggacgaggccggCGCG
AACAATGAGGACGGGAACCGGGTGGAGGACCTCTGA
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Coding sequence (CDS) from alignment at CM002455.1:699017..700002+

>rna276 ID=rna276|Name=rna276|organism=Nannochloropsis gaditana|type=CDS|length=1506bp|location=Sequence derived from alignment at CM002455.1:699017..700002+ (Nannochloropsis gaditana)
ATGGATTCGCGGGACTCATTGGTTTACAAGGCCAAACTGGCGGAGCAAGC
CGAGCGATTCGACGAGATGGTCGACCACATGAAGGCCGTGGCCCAACAGC
CTCAGGAGCTTTCTGTCGAGGAGCGCAATCTTCTCTCCGTGGCGTACAAA
AACGTGATTGGGTCCCGTCGAGCCTCTTGGCGCGTAATTTCCTCCATCGA
ACAGAaaggggagcaggagcgtcTGCCCCTGATTCGTGAGTACAAAGCCA
AGATTGAGGACGAGCTGCTGGAGATTTGCAACGACATTTTGAATATAATA
GAGACGGAGCTCATCCCGAACTCGACTTCTGAGGAAGGCAAGGTATTCTA
TTTCAAGATGAAGGGTGACTATCATCGTTACTTGGCAGAGTTCCAGGTGG
GCGAGAAGCGACGCGAGTCCTCGGACGCGGCCCTTTCCGCCTACAAGTGC
GCCACAGACATCGCCGAGCACGATTTGCCTCCCACACACCCGATCCGCTT
GGGCCTGGCCTTGAATTTTTCGGTCTTCTTCTATGAGATATACAACAGCC
CGGATCGAGCCTGCGCATTGGCGAAGAAAGCTTTCGATGACGCGATCGCT
GAACTGGACACTCTCTCGGAGGAGAGCTACAAGGACAGCACCCTGATCAT
GCAGTTGCTTCGCGACAACCTGACGCTCTGGACTTCGGATCAAAacgagg
cggacgaggccggCGCGAACAATGAGGACGGGAACCGGGTGGAGGACCTC
TGAATGGATTCGCGGGACTCATTGGTTTACAAGGCCAAACTGGCGGAGCA
AGCCGAGCGATTCGACGAGATGGTCGACCACATGAAGGCCGTGGCCCAAC
AGCCTCAGGAGCTTTCTGTCGAGGAGCGCAATCTTCTCTCCGTGGCGTAC
AAAAACGTGATTGGGTCCCGTCGAGCCTCTTGGCGCGTAATTTCCTCCAT
CGAACAGAaaggggagcaggagcgtcTGCCCCTGATTCGTGAGTACAAAG
CCAAGATTGAGGACGAGCTGCTGGAGATTTGCAACGACATTTTGAATATA
ATAGAGACGGAGCTCATCCCGAACTCGACTTCTGAGGAAGGCAAGGTATT
CTATTTCAAGATGAAGGGTGACTATCATCGTTACTTGGCAGAGTTCCAGG
TGGGCGAGAAGCGACGCGAGTCCTCGGACGCGGCCCTTTCCGCCTACAAG
TGCGCCACAGACATCGCCGAGCACGATTTGCCTCCCACACACCCGATCCG
CTTGGGCCTGGCCTTGAATTTTTCGGTCTTCTTCTATGAGATATACAACA
GCCCGGATCGAGCCTGCGCATTGGCGAAGAAAGCTTTCGATGACGCGATC
GCTGAACTGGACACTCTCTCGGAGGAGAGCTACAAGGACAGCACCCTGAT
CATGCAGTTGCTTCGCGACAACCTGACGCTCTGGACTTCGGATCAAAacg
aggcggacgaggccggCGCGAACAATGAGGACGGGAACCGGGTGGAGGAC
CTCTGA
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Synonyms
Publications