rna2751, rna2751 (mRNA) Nannochloropsis gaditana

Overview
Namerna2751
Unique Namerna2751
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2018
Alignment locationCM002459.1:1118597..1120531 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g130.7930.mrna
Orig protein idgnl|cribi|Naga_100008g130.7930
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1118597..1120531 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100008g130gene2632Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28038.1cds2743Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2751rna2751-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2751 ID=rna2751|Name=rna2751|organism=Nannochloropsis gaditana|type=mRNA|length=2018bp
TGGATGAAGTTATAATTACGCCATGGCACTGCATATCGGCAGGATATGTA
AAGGGTTCTCCATTAAAGGCATGAAGACAATGACTTCCAGCAGTATTGCT
CACTTTTTCCTTCCCAACATACTCCTCCTGCAGGCAGGCCACCTCCCTGG
CTTCTCCCTGAAGGCCTGACCTGACACCCCCTTTTGGCACGTTTCACCCC
AAGCCCCGCACCTCCAGACACCGTCAGTGTGTTAAAACCCTGCTGTTGTC
GTGGCAGGCTCGCCTACGCCGTGGTCGTCGTCTGCGGCTTGAAAGCCTTC
GCCATTTTAAAGAAGTGTTTGGCAATAATTTACGCTTTAGACTTCGTTGT
CACGGACAATACTAGCACCACATCGCGACACCTCCCACATACAATCCTTG
TGACATGACCGTGGGTATGGCTATCCAAGGCGTGAGCCCCCTGAGCGACA
TCGGTGATTTGGCGGCAGCCTGGACCTTGGACATCTTGATCCCTCGGCTG
TGCCTCGCCATTCTCTTCCTCTCCGTTTCCCTGGTGAAGCTCACTCTCCG
GTACCCAATCCGAGTCTACGTCGGCGCCAATCCTGTGGTGCGCAGCATTG
TCCAGCGCTGCCCATCCTTCCAGAAAGACTACCGGCCCCCATCGTGGGCC
TGTGGGGCGTGGGCGCAGGCCGTCATCTACATGTATCGGAGCTGGCGCAA
CAACCACCTTCGGGGTTTTGCCCGGGAAGTGATCCGATTGCCGGACGGGG
AGTGCGTGTCCTCGTACTGGATGGCGCCTCCAGGTCCCATGCGGGACGCG
GTCATGCAGTGCAAGGTGGACGGGAGGGAAGAGGAGACCGACGCGATCAT
CGAGGCCTTAGTATACCATATGCCCTGTGACGAGAGACTCCCCCCGATCG
TGATCATATGCCACGGCGTCTTTCAAAACGGCGCGGATCTTTATGATTTC
TGCAGATTCATGACGGAGACGTGTGGCTATGTTGTCTGTGTCTTCAACCG
GAGGGGAAACGACATGCCCTTGTCCCGGGCCCGATTCAACACAGTAGGCG
ACCAGGCTGATTTCAGGTTCATTCTGTCTAGATTGCGGGAATTTTTCCCA
AACAATGGTTTCTATGGCGTCGGGATCAGCGCAGGGTCGAGCTTGCTGGC
CCGCTATCTGGGGGACGCGGGGGAAGAGTGCGAGTTGGAGGGAGGGGTGT
TGATCTCAGGGGGCTACGACATGGAGCTTTCCTTGAGGCACATGACGCCT
CTAGCGGATTTGGTGGTGACCACGCAGGCCAAGAGCTTCTTCTTGGAGCG
GAATGAGGAGACGTTGGCCAGACAGGATGGCCCGGGCCTGCAACGGTTGA
AACGGAGCCGTTCCATGCAAGAGTTCCATGAGCACTTGCATGTCTTCGAC
GGGAAAGCGTCGCGGGAGGAATACTTTCAGACGCACAATCCAGCATTGGT
GCTGGACCGGATCGCCCGTCCGGTCGTGTACATTAATGCCTACGACGACA
TGTGCTTCCCCGGGCATTTCACCTTCCAATACAAACACTTGGTGGAACGG
TGTCAGCTCGCGACGATCGTGCATATGGAGAGAGGCGGACACGGGACGTT
TTACGAAAATTGGGACGCGGGTTCCTCCCGGGCCTTTCAATGCGTGAGGG
AGTTTGTGGATTGCCTCCACAAAGAGTAAAGGAGTTGGGGAGAAAGGAGG
AGGTGGAAAGAAAAAATAGGCATAGACAGTCGCGCAAACTGTATGATTAA
AATTTAACACAACTGATTTGAAATGGGTCCACGGGACGTTTCTGTGTACA
GCGTCTATTTGGGAGGAGGCGGCGAAGGAAGATTCTCCCAGAGGGGGCGG
GGGGGGGGGGCGAGGCGAAAGGGATAAGAGGCAGAGGGTGGAGGCTCAAA
AATGTACGATGCTGCCCTGTTGACGACACATTCCGGTCATTGGGGTGAAT
GGTAGCCAGTCGACTGTATCATGACGGACGGACGCAAAACTGAAAGAAAA
GAAAGTCAACAGTAGCGA
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protein sequence of rna2751

>rna2751-protein ID=rna2751-protein|Name=rna2751|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MCLTVPESVSYAVLSALVSCPLFGVGRVHVDRRLPRIHRTSPSRQSFLGP
IHDVLFRWKRGRIGVISTTYSDSSLPSLHHTLLPQSFPCPPRLPDEARPC
HQCRSSTWSETTQRRMHQMRRRTSPAICTSLLPLSLYSILPRPLSPSSLP
LPSPPPPPLSPLLPVCFHCPRALRCRLWACVPCSGSHREGGRRQRGRRRR
GPSRRGM
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mRNA from alignment at CM002459.1:1118597..1120531-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2751 ID=rna2751|Name=rna2751|organism=Nannochloropsis gaditana|type=mRNA|length=1935bp|location=Sequence derived from alignment at CM002459.1:1118597..1120531- (Nannochloropsis gaditana)
TGGACGATCGAAAGTCATGGTATTTACGACCATTTTTATGTTGTCTTTGC
GCACACTACAGATTTGTTCATCTCTGAAGATTTAACCTGAAGGCGCTTTG
GTTCCTCTTTGGGAATGGTTGTTTGAAATTCCTTCCCGCAGAAATTCGAT
CCCGGAGCAAAGGCAATCTTTTCGAGATCGAGAACGTGGACTGCGTAGGA
GAGGTCTTAAGCGTGATTCATACAAGCTGGTCATCGAAGTACAGAACCGC
CTTGCAGGATGGCCGCTTCAGAGCTCCCGAGTTCAGGGAATGTACCTCAT
GGTCTCGGCCAGGTTCAGGGCCCAGCTGGCGCGACAACTGGAATGCCAAC
GCCTGACATTGATTCGGATCTGCATTTGATATGGCCTGAGGAAGAGGATG
GCTTTGGCTGGGATGAACAGGAGGACCAAGTGATTGGCCGGGAGGAAGAG
GAGGAACCGGCAGCAGGGGAGGAGGATCAGGGCTCGAGGTACGTGCATGC
ACATTCCCTGACTTGCGTAGATGGCCCATGTGCCTGACCGTGCCCGAAAG
TGTGTCTTATGCTGTCTTGTCGGCGCTTGTCTCATGCCCCCTCTTCGGGG
TCGGACGTGTCCATGTCGATAGGCGCCTCCCCCGCATCCATCGCACCTCC
CCATCCCGCCAGTCCTTTCTTGGCCCGATTCATGACGTGCTCTTTCGCTG
GAAAAGAGGTAGAATCGGCGTTATCTCAACCACTTACAGTGACTCTTCCC
TCCCTTCCCTCCACCACACCCTCCTTCCTCAATCCTTCCCCTGCCCACCC
CGCCTGCCTGACGAAGCGCGTCCTTGCCATCAATGCCGTTCATCAACCTG
GAGCGAGACGACGCAGAGACGGATGCACCAGATGAGGAGGAGGACGAGCC
CAGCTATATGCACCAGCCTCCTACCCCTCTCCCTCTATTCCATCCTCCCC
CGCCCCCTCTCTCCTTCCTCCCTTCCTCTTCCTTCCCCTCCCCCCCCCCC
ATTGTCGCCCCTCCTACCTGTCTGCTTTCATTGTCCGCGGGCCCTTCGTT
GCCGGCTATGGGCCTGTGTACCCTGCAGCGGGAGCCACCGGGAGGGGGGG
AGGCGGCAACGGGGAAGGAGGAGGAGAGGGCCGTCCCGGCGTGGGATGTA
AGGGACCGGTGGGAGTGGAGGAGGAGGACTGGAAGCGGGGAAAGAGGCCT
TGCGAGGGGATGATAGGACGGGAAGACGCGCTGGGCAAGGTTTGAGGAAA
AGTGAGGGGCATTTTGGGTGTTCATAACCGTCGGTTAGATCCAATCACCG
GGATCAGGAAGGAGGCATCAGGACGCGCGGGACCCTCTTGCGGCCCTTGC
CTTTCTCATGGCGCGTAGGGGAGATGGATGGAATGCTGCGGCTTGCCTGA
CTGGTGGCGGTAGGGGCTTCGCGGTGGAGGAGAGGGCATGGAAGGGAAAT
CTGGTGTTCGAATCTTCAAAGATTTAGCACGTCTGCGAGAGGCGATGGTC
TTGTTTCGAGGAGTGGAGAGAGATGAGGTTGCCTGAGGGGCGCTCTGTAG
AGAACTAGGAGAGAAGTTTCGGGTACTTTTGTATGACTAGAGCCACAGTA
CCCCGCATGTGAAAGGGAGCCTGAACGCAAGAAAAGAAGAGAGGCAAGCG
ACCCAGCAGGTGTCAACAGGCTACCCCATCCGTGCTGAGGAAAGGGGCCT
TCGCATGCATCGAGGTAGTGGGGCTGGCTGCCGGTGGAACAGACGAACGT
CCACGCCCAAACGTGTAATACAACCTGCAAGGGTTTGAAAGCCGAGAACC
CAATTAAGTGATCAGGCACTGAGGTGCCCCCGACGAAGTCCCCAAAGAAA
TTCCACGGCGGGCACACAGGCATTGAACGGGCGGATGGGGGTCGCGGATA
CCCATCCGAAAAGCAGCGCGCCCAGACAGCATACA
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Coding sequence (CDS) from alignment at CM002459.1:1118597..1120531-

>rna2751 ID=rna2751|Name=rna2751|organism=Nannochloropsis gaditana|type=CDS|length=624bp|location=Sequence derived from alignment at CM002459.1:1118597..1120531- (Nannochloropsis gaditana)
ATGTGCCTGACCGTGCCCGAAAGTGTGTCTTATGCTGTCTTGTCGGCGCT
TGTCTCATGCCCCCTCTTCGGGGTCGGACGTGTCCATGTCGATAGGCGCC
TCCCCCGCATCCATCGCACCTCCCCATCCCGCCAGTCCTTTCTTGGCCCG
ATTCATGACGTGCTCTTTCGCTGGAAAAGAGGTAGAATCGGCGTTATCTC
AACCACTTACAGTGACTCTTCCCTCCCTTCCCTCCACCACACCCTCCTTC
CTCAATCCTTCCCCTGCCCACCCCGCCTGCCTGACGAAGCGCGTCCTTGC
CATCAATGCCGTTCATCAACCTGGAGCGAGACGACGCAGAGACGGATGCA
CCAGATGAGGAGGAGGACGAGCCCAGCTATATGCACCAGCCTCCTACCCC
TCTCCCTCTATTCCATCCTCCCCCGCCCCCTCTCTCCTTCCTCCCTTCCT
CTTCCTTCCCCTCCCCCCCCCCCATTGTCGCCCCTCCTACCTGTCTGCTT
TCATTGTCCGCGGGCCCTTCGTTGCCGGCTATGGGCCTGTGTACCCTGCA
GCGGGAGCCACCGGGAGGGGGGGAGGCGGCAACGGGGAAGGAGGAGGAGA
GGGCCGTCCCGGCGTGGGATGTAA
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Synonyms
Publications