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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g114.7927.mrna |
| Orig protein id | gnl|cribi|Naga_100008g114.7927 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1082626..1085515 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2738 ID=rna2738|Name=rna2738|organism=Nannochloropsis gaditana|type=mRNA|length=1463bp
CTTTGCGTCAGGAGGTGTCATCAGATTTGAGAGGAAAATGGACAGTTTTC
ATCCCACTTGTGCCATAAATATGGTAACGAGGGGGGCAAGCTGTCAATAA
ATAGTAATCTACGAGGATATTGTGCCGAAACATTCGACGCCAACTCTCCC
AAGACACTCGTCACGTCAAGTCATCTTTTTCGCCCGGGGCAGGCTCTCAT
CGTATCACCAAAGAAGACACTCGTTGCCCTTAATTTTTTTCGAATCAAAT
CCCGAAGCATCCGCCGCATCTCTCCTGCTACCCCTGCATGTAATTCTCCG
CACGGAAATCCATTTGTACCGACGTCGTCTGGTCGCATTGTATAAGTATT
TTGTTGGGACCTCCCTAATGCTGGAGGGAGAACTTCAAGACAGCAGAAGG
CGAGTGGATGCACTGACACCACTCCGAAAAGACCCAAAACTCACGCCCAA
GGATAATTTGAGACTCACCGTCCAAAATACGAACCATTTTCCCGCGTACC
ATAGGACTCCATCCGCTTCGTTCAAAGCACCGGAATCACTGCCGGTGGTT
TTGCCGACTGGGCGCGGGAGGCCTCATGCTCGAACCGGAATGTCGAGGGA
TGGTCTTGAATGAAGCCGCTGCCTCAGTCAAATCAAATGGGAGCGACTTG
GACGATGATGTGAGTGACCGGGATGCGCCCCCACCACCCCCTACGCCCTT
GCACACCGACCCTCGTGGGCAGCGAAACAAAGGTGATATCCTGGAGTCCT
TGCTCGAGATAAGCTTGGATAACGAGGAGGGCGACATCGGTGGGTCCAGG
AGCACGACCTCGGATTTACCCCAGGTTAAAAATGAGCCATCGGCCGCGCG
CACTATGCTTGAACTCAAAGACATTGCTCGGATGCGGCAGCATGTCAACG
TCCTGGATCCTGTTCCGTCTCGAGGCGGGTTTGCAGCAATGAAGCGAGGG
GCATTAGGGGGGAGAGGAATTGAAAGAGGAGGGCAATTGACGTCCGCCGT
GTCTTCGGCTTTAGAGCAGGCTACCGCATCCTTTGGAGAAGAGACAGGAT
CCCTCGCTGCTTTTGAGCGTATGCAGCGGATCAAAGGCGGCAAAGGTGGT
GGGAAAGGTGGGGTTCACGGCATCATGGATAGCAGGGGCTCCGGACGCAA
GGCTGTCTTATCCAGCAAGGCTCGTCAGCGAAGAATAGCGGGAAGCGAGA
AGGAGGAAGCCTACAACGACAAATTGAACGGCCGAATGGTAAAGCACAAC
AAGCGGAAGGAGCGCATGGAAAGGCTGAGGCGCATGTATTGAATGAGTCC
GGGAAAGGGAGGATCCGACCTTGTGAATATATTTGAATTTATTGTGTCGG
GATGCATGGAGGGCAACGAGCATGAATCAAAAACATGATGATTGTGCAGA
CATTGACACACTTGGCGCACGCAATTAAAGCAAAGCAAATTACAGACCTT
GGCAATTCGGTTT back to topprotein sequence of rna2738 >rna2738-protein ID=rna2738-protein|Name=rna2738|organism=Nannochloropsis gaditana|type=polypeptide|length=810bp
MYNIGEKKAFVNDLATKLLGGDAILGTSPHHHHHFKFQGLQQNNNGVLTL
ENLVLFKIQDFRLQFLSKCLQLHALSGKNQLVLSLTHYEVLTDVLRVILR
EANNEQDYLSIRMVFFLSGLVGTYLGQGGRGGHSSLRTIKSALRTHEAWK
NATFYLGVLDECLARDKQHWMHLQGPLQEFFCCEVKNEEIISLLLSFRLK
ALAKALLELQAPSTILEELLVHVREKHGFAQKMEDLYAPLDLRHMLWLVD
VLVRAWHLPTLADAGDSWDTEKSAEVTRPGTDSGSTRTDGSGLGGTVAYL
DTLRRRSSLSAMVGTTTPKSSLSNVLRWASETTLRAGHSASLGFSLHHEI
FRFVVDRVVANPRKINLRACVLPPGPAVEGDSPGKGIPHPSACLCARPNK
PWRILGGYEPQWEGIRRYTPVILCEVCFRLALHRGRLDQACFLQPVGIAA
LPATQSQRPESILAFVFPVPVPKVEEMEPNGKRENGKAGQEGDRGRGGKM
VTTRRAGVRRRVSSTGSNSTSTSSPALSVTPTASPQVTSTSYNAQRNDSG
RADGELSASRRADRNVTDAFPRGRALQGSTERRDSDDSTSGRSFSKTRGP
GVHGAGASPYHVRSSSVSSALSYSPSTPGWTDPDHRGSHSRPVRRFEGTR
LSSSSAAGLSPSLSGHARANRRASGEASVLAGRRREHRGFDLLREGGMEV
LKHGRFGCVVPHYRVLFVDREEVYWCRREEVGRKKKKAGARRGGLSLSHL
LEVRLKKGARIVSLTFQERAFVVEALSDEDFDVLAAVFTAVMNDNVQDSR
QPIVISRRRR back to topmRNA from alignment at CM002459.1:1082626..1085515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2738 ID=rna2738|Name=rna2738|organism=Nannochloropsis gaditana|type=mRNA|length=2890bp|location=Sequence derived from alignment at CM002459.1:1082626..1085515- (Nannochloropsis gaditana)
AACAGGCATCTGCCTGCCCTCCCTGCTAGGTGTCGTCGTGTCTCGCCTTC
ATCGTACCGGCGCGGAGGAGACACTACAAGGACGAACCAGAAACTCCCTT
CTGAAAATTTGGACGCAGTAAATTGAGACATAGGCGGTAGATTATGTACA
ATATAGGCGAAAAAAAGGTATTTTATAGTTGCGAGGAAGGACAGACATAC
CTAGGCCCCTTCCCGACCACCTTGTAAAATGTAGCACTTTGCAGGGCAAA
TCCATCATCATTCTTTCTCACCGCCACCTCTTGTATGTTTTTATAGGCTT
TCGTCAACGACTTGGCCACCAAGCTGTTGGGTGGCGACGCTATTTTGGGC
ACGTCACCCCATCATCACCATCACTTCAAGTTTCAAGGCTTGCAGCAAAA
TAACAACGGAGTCCTGACTCTTGAAAATCTAGTCCTATTTAAAATCCAGG
ATTTTCGCCTCCAATTCTTGTCCAAATGTCTGCAACTTCACGCCCTGTCC
GGGAAAAATCAACTCGTCCTCAGCCTCACGCACTACGAGGTCCTGACCGA
CGTACTCCGGGTCATCCTGCGTGAAGCCAACAACGAGCAAGACTACCTGA
GTATCCGCATGGTTTTTTTCCTTTCAGGTCTGGTAGGAACGTATCTAGGG
CAAGGTGGGCGCGGCGGGCATTCTTCCTTGCGCACCATAAAATCAGCTTT
GCGGACGCACGAGGCTTGGAAAAATGCGACCTTTTACTTGGGCGTCCTGG
ACGAGTGCCTGGCCAGGGATAAACAGCACTGGATGCATTTGCAAGGGCCA
CTGCAAGAATTTTTCTGCTGCGAGGTCAAAAACGAGGAAATCATCTCTTT
GTTGCTTTCCTTTCGTCTCAAGGCTCTGGCGAAGGCCCTGCTGGAGCTGC
AGGCCCCCTCCACCATCCTGGAAGAGCTGCTAGTGCATGTCCGCGAAAAG
CATGGCTTCGCGCAAAAAATGGAAGACCTGTACGCTCCATTGGATCTTCG
CCACATGCTCTGGCTTGTGGACGTCCTCGTTCGGGCGTGGCACCTACCCA
CGCTGGCCGATGCAGGAGACAGCTGGGACACTGAGAAGAGCGCGGAGGTT
ACCCGTCCCGGCACAGACAGCGGCAGCACCCGCACTGATGGCAGCGGGCT
AGGGGGCACAGTAGCATACCTGGATACACTTCGCCGCCGTTCCTCCTTGT
CGGCCATGGTAGGAACCACCACCCCGAAATCCTCCCTCTCGAACGTCCTC
CGGTGGGCTTCGGAGACGACGCTTCGGGCCGGTCACAGCGCCAGCCTGGG
CTTCTCCCTCCACCACGAGATCTTCCGTTTCGTTGTGGACCGAGTGGTGG
CCAACCCGCGAAAAATCAATCTTCGCGCCTGCGTCTTGCCCCCGGGGCCG
GCCGTGGAAGGTGACAGTCCAGGCAAAGGCATCCCTCACCCCTCCGCTTG
CCTCTGCGCCCGTCCCAACAAGCCCTGGCGCATCTTGGGAGGCTATGAGC
CGCAGTGGGAGGGCATCCGTCGGTATACACCTGTCATCCTCTGTGAGGTT
TGCTTTCGCCTGGCCTTACATCGGGGAAGACTAGACCAGGCTTGTTTTTT
GCAACCGGTCGGGATTGCGGCGTTGCCCGCCACCCAATCGCAGCGCCCGG
AATCGATCCTGGCCTTCGTGTTTCCAGTGCCCGTGCCTAAGGTGGAGGAA
ATGGAGCCAAATGGAAAAAGGGAGAACGGGAAGGCGGGACAGGAAGGCGA
CAGGGGCCGGGGGGGGAAGATGGTGACGACAAGGAGGGCTGGGGTGCGGC
GGAGAGTATCGTCCACTGGCAGTAACAGCACCAGCACGAGCAGTCCTGCA
TTATCCGTGACCCCTACTGCCTCCCCACAGGTCACCTCGACCTCATATAA
TGCGCAGCGCAATGACAGCGGCCGCGCGGACGGCGAGCTTTCTGCAAGCC
GAAGGGCAGATCGGAACGTGACGGACGCCTTCCCCCGAGGTCGGGCCCTG
CAAGGGTCAACGGAGAGGAGGGATTCTGATGACTCCACCTCTGGCCGGTC
TTTCTCGAAAACAAGAGGGCCTGGGGTCCACGGCGCGGGCGCCAGTCCCT
ACCACGTTCGGAGCAGCAGCGTGAGCTCGGCTTTGTCCTATTCCCCCTCC
ACCCCCGGATGGACAGACCCCGACCACCGGGGCAGCCATAGCCGGCCTGT
TCGGAGGTTTGAGGGCACCCGGTTGTCATCCTCCTCGGCCGCCGGTCTCT
CCCCGTCCTTGTCCGGGCATGCACGCGCCAACCGGCGGGCTTCGGGAGAA
GCTTCGGTGTTGGCTGGGCGACGGCGGGAGCACCGTGGCTTTGATCTCCT
GAGGGAGGGAGGCATGGAAGTGCTCAAGCATGGCCGCTTTGGCTGCGTCG
TGCCGCATTATCGCGTTCTCTTTGTGGACCGGGAGGAAGTGTACTGGTGC
CGACGGGAAGAGGTGGGAAGGAAGAAGAAGAAGGCAGGGGCCAGGCGAGG
GGGTTTGTCGCTGTCGCATCTGCTAGAGGTGAGGCTGAAGAAAGGGGCTC
GCATCGTGTCTTTGACCTTTCAAGAGCGCGCGTTCGTGGTGGAGGCACTG
TCCGATGAGGACTTTGACGTGCTCGCGGCTGTTTTCACGGCGGTAATGAA
CGACAACGTGCAGGACAGCCGACAACCGATCGTCATCAGCCGAAGACGGC
GCTAGCGGACAATGCGGCCTCTCGCCATACAAATGCAAGAAAGGTGGAGC
AACATTGTAGATGACAAAAGGCTGGAAGCAGTGCTTCCTAAATTGAGACG
GTGCAGTCGGTTTGTGGGATCTCAACAGCCTGGCTGCCCTGGTCACGCCA
CATTTTTTTAAACAAAATAAGTTTGCCGACAACACAAAAA back to topCoding sequence (CDS) from alignment at CM002459.1:1082626..1085515- >rna2738 ID=rna2738|Name=rna2738|organism=Nannochloropsis gaditana|type=CDS|length=4866bp|location=Sequence derived from alignment at CM002459.1:1082626..1085515- (Nannochloropsis gaditana)
GCTTTCGTCAACGACTTGGCCACCAAGCTGTTGGGTGGCGACGCTATTTT
GGGCACGTCACCCCATCATCACCATCACTTCAAGTTTCAAGGCTTGCAGC
AAAATAACAACGGAGTCCTGACTCTTGAAAATCTAGTCCTATTTAAAATC
CAGGATTTTCGCCTCCAATTCTTGTCCAAATGTCTGCAACTTCACGCCCT
GTCCGGGAAAAATCAACTCGTCCTCAGCCTCACGCACTACGAGGTCCTGA
CCGACGTACTCCGGGTCATCCTGCGTGAAGCCAACAACGAGCAAGACTAC
CTGAGTATCCGCATGGTTTTTTTCCTTTCAGGTCTGGTAGGAACGTATCT
AGGGCAAGGTGGGCGCGGCGGGCATTCTTCCTTGCGCACCATAAAATCAG
CTTTGCGGACGCACGAGGCTTGGAAAAATGCGACCTTTTACTTGGGCGTC
CTGGACGAGTGCCTGGCCAGGGATAAACAGCACTGGATGCATTTGCAAGG
GCCACTGCAAGAATTTTTCTGCTGCGAGGTCAAAAACGAGGAAATCATCT
CTTTGTTGCTTTCCTTTCGTCTCAAGGCTCTGGCGAAGGCCCTGCTGGAG
CTGCAGGCCCCCTCCACCATCCTGGAAGAGCTGCTAGTGCATGTCCGCGA
AAAGCATGGCTTCGCGCAAAAAATGGAAGACCTGTACGCTCCATTGGATC
TTCGCCACATGCTCTGGCTTGTGGACGTCCTCGTTCGGGCGTGGCACCTA
CCCACGCTGGCCGATGCAGGAGACAGCTGGGACACTGAGAAGAGCGCGGA
GGTTACCCGTCCCGGCACAGACAGCGGCAGCACCCGCACTGATGGCAGCG
GGCTAGGGGGCACAGTAGCATACCTGGATACACTTCGCCGCCGTTCCTCC
TTGTCGGCCATGGTAGGAACCACCACCCCGAAATCCTCCCTCTCGAACGT
CCTCCGGTGGGCTTCGGAGACGACGCTTCGGGCCGGTCACAGCGCCAGCC
TGGGCTTCTCCCTCCACCACGAGATCTTCCGTTTCGTTGTGGACCGAGTG
GTGGCCAACCCGCGAAAAATCAATCTTCGCGCCTGCGTCTTGCCCCCGGG
GCCGGCCGTGGAAGGTGACAGTCCAGGCAAAGGCATCCCTCACCCCTCCG
CTTGCCTCTGCGCCCGTCCCAACAAGCCCTGGCGCATCTTGGGAGGCTAT
GAGCCGCAGTGGGAGGGCATCCGTCGGTATACACCTGTCATCCTCTGTGA
GGTTTGCTTTCGCCTGGCCTTACATCGGGGAAGACTAGACCAGGCTTGTT
TTTTGCAACCGGTCGGGATTGCGGCGTTGCCCGCCACCCAATCGCAGCGC
CCGGAATCGATCCTGGCCTTCGTGTTTCCAGTGCCCGTGCCTAAGGTGGA
GGAAATGGAGCCAAATGGAAAAAGGGAGAACGGGAAGGCGGGACAGGAAG
GCGACAGGGGCCGGGGGGGGAAGATGGTGACGACAAGGAGGGCTGGGGTG
CGGCGGAGAGTATCGTCCACTGGCAGTAACAGCACCAGCACGAGCAGTCC
TGCATTATCCGTGACCCCTACTGCCTCCCCACAGGTCACCTCGACCTCAT
ATAATGCGCAGCGCAATGACAGCGGCCGCGCGGACGGCGAGCTTTCTGCA
AGCCGAAGGGCAGATCGGAACGTGACGGACGCCTTCCCCCGAGGTCGGGC
CCTGCAAGGGTCAACGGAGAGGAGGGATTCTGATGACTCCACCTCTGGCC
GGTCTTTCTCGAAAACAAGAGGGCCTGGGGTCCACGGCGCGGGCGCCAGT
CCCTACCACGTTCGGAGCAGCAGCGTGAGCTCGGCTTTGTCCTATTCCCC
CTCCACCCCCGGATGGACAGACCCCGACCACCGGGGCAGCCATAGCCGGC
CTGTTCGGAGGTTTGAGGGCACCCGGTTGTCATCCTCCTCGGCCGCCGGT
CTCTCCCCGTCCTTGTCCGGGCATGCACGCGCCAACCGGCGGGCTTCGGG
AGAAGCTTCGGTGTTGGCTGGGCGACGGCGGGAGCACCGTGGCTTTGATC
TCCTGAGGGAGGGAGGCATGGAAGTGCTCAAGCATGGCCGCTTTGGCTGC
GTCGTGCCGCATTATCGCGTTCTCTTTGTGGACCGGGAGGAAGTGTACTG
GTGCCGACGGGAAGAGGTGGGAAGGAAGAAGAAGAAGGCAGGGGCCAGGC
GAGGGGGTTTGTCGCTGTCGCATCTGCTAGAGGTGAGGCTGAAGAAAGGG
GCTCGCATCGTGTCTTTGACCTTTCAAGAGCGCGCGTTCGTGGTGGAGGC
ACTGTCCGATGAGGACTTTGACGTGCTCGCGGCTGTTTTCACGGCGGTAA
TGAACGACAACGTGCAGGACAGCCGACAACCGATCGTCATCAGCCGAAGA
CGGCGCTAGATGTACAATATAGGCGAAAAAAAGGCTTTCGTCAACGACTT
GGCCACCAAGCTGTTGGGTGGCGACGCTATTTTGGGCACGTCACCCCATC
ATCACCATCACTTCAAGTTTCAAGGCTTGCAGCAAAATAACAACGGAGTC
CTGACTCTTGAAAATCTAGTCCTATTTAAAATCCAGGATTTTCGCCTCCA
ATTCTTGTCCAAATGTCTGCAACTTCACGCCCTGTCCGGGAAAAATCAAC
TCGTCCTCAGCCTCACGCACTACGAGGTCCTGACCGACGTACTCCGGGTC
ATCCTGCGTGAAGCCAACAACGAGCAAGACTACCTGAGTATCCGCATGGT
TTTTTTCCTTTCAGGTCTGGTAGGAACGTATCTAGGGCAAGGTGGGCGCG
GCGGGCATTCTTCCTTGCGCACCATAAAATCAGCTTTGCGGACGCACGAG
GCTTGGAAAAATGCGACCTTTTACTTGGGCGTCCTGGACGAGTGCCTGGC
CAGGGATAAACAGCACTGGATGCATTTGCAAGGGCCACTGCAAGAATTTT
TCTGCTGCGAGGTCAAAAACGAGGAAATCATCTCTTTGTTGCTTTCCTTT
CGTCTCAAGGCTCTGGCGAAGGCCCTGCTGGAGCTGCAGGCCCCCTCCAC
CATCCTGGAAGAGCTGCTAGTGCATGTCCGCGAAAAGCATGGCTTCGCGC
AAAAAATGGAAGACCTGTACGCTCCATTGGATCTTCGCCACATGCTCTGG
CTTGTGGACGTCCTCGTTCGGGCGTGGCACCTACCCACGCTGGCCGATGC
AGGAGACAGCTGGGACACTGAGAAGAGCGCGGAGGTTACCCGTCCCGGCA
CAGACAGCGGCAGCACCCGCACTGATGGCAGCGGGCTAGGGGGCACAGTA
GCATACCTGGATACACTTCGCCGCCGTTCCTCCTTGTCGGCCATGGTAGG
AACCACCACCCCGAAATCCTCCCTCTCGAACGTCCTCCGGTGGGCTTCGG
AGACGACGCTTCGGGCCGGTCACAGCGCCAGCCTGGGCTTCTCCCTCCAC
CACGAGATCTTCCGTTTCGTTGTGGACCGAGTGGTGGCCAACCCGCGAAA
AATCAATCTTCGCGCCTGCGTCTTGCCCCCGGGGCCGGCCGTGGAAGGTG
ACAGTCCAGGCAAAGGCATCCCTCACCCCTCCGCTTGCCTCTGCGCCCGT
CCCAACAAGCCCTGGCGCATCTTGGGAGGCTATGAGCCGCAGTGGGAGGG
CATCCGTCGGTATACACCTGTCATCCTCTGTGAGGTTTGCTTTCGCCTGG
CCTTACATCGGGGAAGACTAGACCAGGCTTGTTTTTTGCAACCGGTCGGG
ATTGCGGCGTTGCCCGCCACCCAATCGCAGCGCCCGGAATCGATCCTGGC
CTTCGTGTTTCCAGTGCCCGTGCCTAAGGTGGAGGAAATGGAGCCAAATG
GAAAAAGGGAGAACGGGAAGGCGGGACAGGAAGGCGACAGGGGCCGGGGG
GGGAAGATGGTGACGACAAGGAGGGCTGGGGTGCGGCGGAGAGTATCGTC
CACTGGCAGTAACAGCACCAGCACGAGCAGTCCTGCATTATCCGTGACCC
CTACTGCCTCCCCACAGGTCACCTCGACCTCATATAATGCGCAGCGCAAT
GACAGCGGCCGCGCGGACGGCGAGCTTTCTGCAAGCCGAAGGGCAGATCG
GAACGTGACGGACGCCTTCCCCCGAGGTCGGGCCCTGCAAGGGTCAACGG
AGAGGAGGGATTCTGATGACTCCACCTCTGGCCGGTCTTTCTCGAAAACA
AGAGGGCCTGGGGTCCACGGCGCGGGCGCCAGTCCCTACCACGTTCGGAG
CAGCAGCGTGAGCTCGGCTTTGTCCTATTCCCCCTCCACCCCCGGATGGA
CAGACCCCGACCACCGGGGCAGCCATAGCCGGCCTGTTCGGAGGTTTGAG
GGCACCCGGTTGTCATCCTCCTCGGCCGCCGGTCTCTCCCCGTCCTTGTC
CGGGCATGCACGCGCCAACCGGCGGGCTTCGGGAGAAGCTTCGGTGTTGG
CTGGGCGACGGCGGGAGCACCGTGGCTTTGATCTCCTGAGGGAGGGAGGC
ATGGAAGTGCTCAAGCATGGCCGCTTTGGCTGCGTCGTGCCGCATTATCG
CGTTCTCTTTGTGGACCGGGAGGAAGTGTACTGGTGCCGACGGGAAGAGG
TGGGAAGGAAGAAGAAGAAGGCAGGGGCCAGGCGAGGGGGTTTGTCGCTG
TCGCATCTGCTAGAGGTGAGGCTGAAGAAAGGGGCTCGCATCGTGTCTTT
GACCTTTCAAGAGCGCGCGTTCGTGGTGGAGGCACTGTCCGATGAGGACT
TTGACGTGCTCGCGGCTGTTTTCACGGCGGTAATGAACGACAACGTGCAG
GACAGCCGACAACCGATCGTCATCAGCCGAAGACGGCGCTAGATGTACAA
TATAGGCGAAAAAAAG back to top
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