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Properties
| Property Name | Value |
| Product | abc transporter family protein |
| Orig transcript id | gnl|cribi|Naga_100008g102.7889.mrna |
| Orig protein id | gnl|cribi|Naga_100008g102.7889 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002459.1 | supercontig | CM002459.1:1056357..1059743 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2729 ID=rna2729|Name=rna2729|organism=Nannochloropsis gaditana|type=mRNA|length=705bp ATGATTCTGGCCAACGCAGCTTTACGGCAATCCTCGTTCGCCCTCTCTAG GTCGTCGCCTGTCCGTAGTCGATTGATCATACCTTTTCGAGGCCTTGCAA AAGGTTCTCCTACGCAGGTCGCTGCAGAGGAGACACGAGAAGCCAATGCT GGCTACGGCATCCAAATTGTCTCGGGCCGTCACACATTGTACAGTGATTT AATGCCAGAGGCTGGAGGTAATGATAAGGGACCGAGTCCTAAAGAATACG CATTGGTTGCTCTCAGCTCATGCACCTTGATGACGGTGCGAATGTATTCC GACTCCATGATCAAGAGCGGGAAATGGCCCGGGAAAAGTATCGAGAAATT GTCCGTTTCGTGCAGTGAGCACGGAGACGATCAGCATGTACCGCTCAATA TCCAAGTGGAGCTTAAGTTGCGGTCAAACCTCGACGAGGAACAGATCAAA CGCCTGGTGGCTGCAGCGGAAAAATGCCCGGTGAAGCGAATGATGAAAGG AGGCGTTAAGAACGGGATTACCACCGTTCTGGTGATCAGAAAAGAAGGCA GTACGGCAGGTTGTGAGAAATATTCAGGTCACGATAAAGACACATTCGAT AGTACGTACTTTTATCCAATTTTCGTCATAAGATATTCGATGGCAGAGAC ACCATTCTTCCTTATCTTCACTCTCTTCGTGTATTTAGTTGATATGATTT TATAA back to topprotein sequence of rna2729 >rna2729-protein ID=rna2729-protein|Name=rna2729|organism=Nannochloropsis gaditana|type=polypeptide|length=870bp MGFDYARSAIIKSQVVAIAVALALALDSPGLLLLYFSQSGFSTSTAYKNG VADYSFKKSVSDILGLNLLKACVLCAFWSFAHGRLLALILPVVATGFCLI KMAVYDEWNSRNKIVPAVVMVLSSLSAMVQLVGVWKTQSTTRDPDASLAE SLEGREWVDNREVARVEDKKKGTSQHSGAAMGSSGFGGLADDGGKADAYR LLMDDPDNEEEGHVPGAGGDRDATDTKSSMAASVPPNMPSVRRPMLFLLY HYARPDHGLLFAGLSFIILSSLFKLAIPNFASSLLTLIIEGATATPPVPT LHTAQFREALFYFLVSVLGLAFFTSLRIWTTAKAEVRLVARLQRILFFAI LHQDVAFHDAQGTGALTSRLTSDCTLLGSIFTTNFNVAIQAAINLLGSTA FLFVLDARLAGAYLALVLAFMLLTRVFGAYAKKMQNQIQTLKAEANAVAD QSIALLRLVRAFATEDWEKGRYDTRTLRNVAKELEVKMLWTLYVPLVFLL QNGLVLVVLLLGGHLVSDGGLSARSLTAFYFYSTTITEAMQSLADNVLSI LTGLGAGEKIMDIIAHKPTIPVKGGTVPSFAARVAPFSPPIVSSSMSVPK ALPAPRSFDLVFDDVSLTYSSETDSHQSLHRAPVLSHLNLRIPEGQRVAI VGLSGSGKSSLISLLLRFYKPTTGRILFGGHDVQSLDPRWLKAQLGVALQ DPMLFGGISIRENITYGLEGIQEEAVKQAAQMAAIHDFILTLPHAYDTVV GERGVTLSGGERQRVGIARALLRRPKIIIMDECTSSLDSLSESKCQEALM ALHRTQPSITLLTIAHRLSTVVDADRILVMAKGKIVEEGTHKELLLREGM YKELVVHQLQEEVIHKKLSV back to topmRNA from alignment at CM002459.1:1056357..1059743+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2729 ID=rna2729|Name=rna2729|organism=Nannochloropsis gaditana|type=mRNA|length=3387bp|location=Sequence derived from alignment at CM002459.1:1056357..1059743+ (Nannochloropsis gaditana) GTTTATAAATAATTGGTCATCTTATTTTGGAATGGCTTGCCATTACTAGC
ACAAGCCATTGTTTTCGGACTCATTATTTCCTTCACGctgcagggaaggg
ggtctATTTCGTACCATTTCGGGCAGTGAAGGTGCGAACGGTGTGGATGG
GAGCACTACGTTTTTGATTTAGGGCAGTTTTAGGGCACGCGTGGTCGGCA
TCTCAcctacctcctccgtcgTGGCGTACTTCGTGCCGCACATTTGCAGC
GACACGCAAGAATGGGTTTCGACTACGCTCGAAGTGCCATCATAAAGTCT
CAGGTGGTGGCCATAGCCGTGGCCTTGGTACGTACGACTTGGAGGAAGCT
GTCGGAGAGGTGCAACCTGGCCTTATTCGTTTATAAGACCTGCTCAAGCA
TTGTGCCTCGCGTATCCGGCATAGTTCATCTCTCTCGTCCCTCTATAGAT
TGATGCCGCACAATCTTCCTTTCGATGTCTTTCAaactttttctcctttt
tacCCATCCTATCTGGGTCGTCTAGGCGCTGGCGCTTGACtcccccggcc
tcctgcTGCTTTATTTCTCTCAATCGGGGTTCTCCACTTCCACCGCCTAC
AAAAATGGAGTTGCAGACTATAGTTTCAAAAAAAGTGTCAGCGATATCTT
GGGTTTGAATTTGCTAAAAGCTTGCGTGTTATGCGCCTTTTGGTCCTTTG
CCCATGGGCGGCTCCTGGCTCTAATCCTCCCTGTCGTAGCGACAGGATTT
TGCCTGATTAAAATGGCCGTCTATGATGAGTGGAACTCGCGCAATAAAAT
TGTACCAGCGGTGGTGATGGTTCTATCCTCGCTTTCCGCGATGGTGCAGC
TTGTTGGCGTGTGGAAGACTCAGAGTACGACCAGGGATCCGGACGCAAGC
TTAGCGGAGAGCCTAGAGGGGCGGGAATGGGTTGACAATAGGGAGGTAGC
ACGCGTGGAGGACAAAAAGAAAGGTACATCGCAGCACTCGGGCGCTGCAA
TGGGTAGCAGTGGTTTTGGAGGCCTGGCTGATGACGGTGGAAAGGCGGAT
GCCTACCGGCTGCTTATGGACGACCCGGAcaacgaagaggagggccatGT
GCCCGGCGCCGGTGGTGACAGGGACGCGACGGACACAAAAAGTAGCATGG
CGGCATCAGTACCCCCGAACATGCCGTCGGTTCGACGGCCCATGCTGTTC
CTGCTCTATCACTACGCCCGCCCCGACCATGGCCTTCTCTTCGCCGGCCT
CTCCTTTATTATCCTCAGCTCACTATTCAAGCTGGCCATCCCCAATTTCG
CTTCATCGCTGCTGACCCTCATCATAGAAGGTGCCACAGCCACACCCCCG
GTGCCCACTCTCCACACGGCGCAATTCCGGGAGGCCTTGTTTTATTTCCT
AGTATCCGTCCTGGGCCTGGCATTTTTCACCTCTCTTCGTATATGGACGA
CCGCCAAGGCAGAGGTCCGATTGGTGGCGAGGCTGCAGAGGATCTTGTTC
TTCGCGATCCTCCACCAAGATGTCGCCTTCCACGACGCGCAAGGAACGGG
CGCGTTGACCTCGCGGTTGACCTCCGACTGTACGCTGCTCGGATCCATAT
TCACGACCAATTTCAATGTGGCCATCCAAGCAGCGATCAATTTGCTCGGC
TCCACGGCTTTCTTGTTCGTTTTGGACGCGCGCCTGGCCGGGGCCTACTT
GGCCCTGGTCTTGGCTTTCATGCTCTTGACCCGTGTGTTCGGCGCCTACG
CCAAGAAAATGCAAAATCAAATTCAAACCCTTAAAGCAGAGGCCAACGCC
GTGGCCGACCAATCAATCGCCCTGCTGCGGTTGGTTCGAGCCTTTGCCAC
TGAAGACTGGGAGAAAGGACGCTACGACACACGGACCTTGCGCAATGTCG
CCAAAGAATTGGAGGTGAAGATGCTTTGGACACTCTATGTCccgcttgtc
ttcctcctccagaatGGACTGGTCCTCGTGGTTCTTCTCTTGGGGGGCCA
CCTGGTTTCGGACGGCGGTTTGTCCGCCCGGTCCTTGACCGCCTTCTACT
TCTACAGCACGACAATTACGGAGGCGATGCAGTCACTGGCAGACAACGTC
TTGAGCATCCTCACAGGCCTCGGGGCCGGTGAGAAGATCATGGATATCAT
CGCCCACAAGCCCACCATCCCGGTCAAAGGAGGCACGGTGCCGTCTTTTG
CGGCACGCGtagcccctttctccccaccaattgtctcctccagcatgtcC
GTGCCCAAGGCCTTGCCTGCACCGAGATCGTTCGACCTGGTCTTCGATGA
CGTCTCCCTCACGTATTCCTCCGAAACGGATTCCCATCAGTCCCTTCATC
GGGCgcctgtcctctcccacctgaACCTGCGGATCCCCGAGGGACAACGC
GTTGCGATCGTGGGCCTTTCGGGGTCGGGGAAATCGTCGCTCATCTCCTT
GCTTTTGCGCTTTTACAAGCCGACCACCGGACGTATCTTGTTCGGAGGCC
ACGACGTCCAGAGCCTGGACCCGCGTTGGCTCAAGGCGCAGCTTGGCGTG
GCTCTCCAAGATCCCATGCTTTTCGGCGGCATTTCAATCCGGGAGAACAT
CACGTATGGTCTGGAAGGTAttcaggaggaggcagttAAGCAGGCAGCGC
AAATGGCGGCAATTCACGATTTTATTCTCACCTTGCCCCATGCCTACGAC
ACGGTGGTGGGTGAGAGGGGGGTAACTTTGTCAGGGGGAGAACGTCAGAG
AGTCGGCATTGCCCGGGCCCTGCTGCGTCGACCAAAAATTATTATCATGG
ACGAGTGTACGAGTAGCTTGGATTCGCTTTCGGAGAGCAAATGTCAAGAA
GCATTGATGGCTTTGCACCGTACGCAGCCGTCTATTACCCTACTGACCAT
CGCCCACCGCTTAAGCACCGTAGTAGACGCGGACCGCATCCTTGTGATGG
CCAAAGGCAAAATTGTAGAGGAGGGAACCCACAAGGAGCTTCTGCTCAGG
GAGGGCATGTacaaggagctggtggtgcatcagctgcaggaggaggttat
tcACAAGAAATTGTCCGTGTAAGACGGAATATGTCATAGGGTGCACTCCC
ACGGGCGTCGGCGGATGCCAGGGAATGGACGATGTGCTGTTGCTTCAAAC
TGCTTGAGGAATAGTGAAAGCCGACAGGTCTCGCGAGACCCTGTAGCCGT
CTCGTCGACCGACTCAATACCAGGGAGGCGCAATTGTAAATTAGTtagaa
ggaaagggacacGCTGTGACGTGTGCTGTGTTTGCGTGGTCGACCTATTA
CTCGTTTGTTTTCTCGTGTTAACCAGCCTCCATCTGTCTGGTTATCTTTC
GCAagttttcctcttttcttccctccatccttcgaCA back to topCoding sequence (CDS) from alignment at CM002459.1:1056357..1059743+ >rna2729 ID=rna2729|Name=rna2729|organism=Nannochloropsis gaditana|type=CDS|length=5226bp|location=Sequence derived from alignment at CM002459.1:1056357..1059743+ (Nannochloropsis gaditana) ATGGGTTTCGACTACGCTCGAAGTGCCATCATAAAGTCTCAGGTGGTGGC CATAGCCGTGGCCTTGGCGCTGGCGCTTGACtcccccggcctcctgcTGC TTTATTTCTCTCAATCGGGGTTCTCCACTTCCACCGCCTACAAAAATGGA GTTGCAGACTATAGTTTCAAAAAAAGTGTCAGCGATATCTTGGGTTTGAA TTTGCTAAAAGCTTGCGTGTTATGCGCCTTTTGGTCCTTTGCCCATGGGC GGCTCCTGGCTCTAATCCTCCCTGTCGTAGCGACAGGATTTTGCCTGATT AAAATGGCCGTCTATGATGAGTGGAACTCGCGCAATAAAATTGTACCAGC GGTGGTGATGGTTCTATCCTCGCTTTCCGCGATGGTGCAGCTTGTTGGCG TGTGGAAGACTCAGAGTACGACCAGGGATCCGGACGCAAGCTTAGCGGAG AGCCTAGAGGGGCGGGAATGGGTTGACAATAGGGAGGTAGCACGCGTGGA GGACAAAAAGAAAGGTACATCGCAGCACTCGGGCGCTGCAATGGGTAGCA GTGGTTTTGGAGGCCTGGCTGATGACGGTGGAAAGGCGGATGCCTACCGG CTGCTTATGGACGACCCGGAcaacgaagaggagggccatGTGCCCGGCGC CGGTGGTGACAGGGACGCGACGGACACAAAAAGTAGCATGGCGGCATCAG TACCCCCGAACATGCCGTCGGTTCGACGGCCCATGCTGTTCCTGCTCTAT CACTACGCCCGCCCCGACCATGGCCTTCTCTTCGCCGGCCTCTCCTTTAT TATCCTCAGCTCACTATTCAAGCTGGCCATCCCCAATTTCGCTTCATCGC TGCTGACCCTCATCATAGAAGGTGCCACAGCCACACCCCCGGTGCCCACT CTCCACACGGCGCAATTCCGGGAGGCCTTGTTTTATTTCCTAGTATCCGT CCTGGGCCTGGCATTTTTCACCTCTCTTCGTATATGGACGACCGCCAAGG CAGAGGTCCGATTGGTGGCGAGGCTGCAGAGGATCTTGTTCTTCGCGATC CTCCACCAAGATGTCGCCTTCCACGACGCGCAAGGAACGGGCGCGTTGAC CTCGCGGTTGACCTCCGACTGTACGCTGCTCGGATCCATATTCACGACCA ATTTCAATGTGGCCATCCAAGCAGCGATCAATTTGCTCGGCTCCACGGCT TTCTTGTTCGTTTTGGACGCGCGCCTGGCCGGGGCCTACTTGGCCCTGGT CTTGGCTTTCATGCTCTTGACCCGTGTGTTCGGCGCCTACGCCAAGAAAA TGCAAAATCAAATTCAAACCCTTAAAGCAGAGGCCAACGCCGTGGCCGAC CAATCAATCGCCCTGCTGCGGTTGGTTCGAGCCTTTGCCACTGAAGACTG GGAGAAAGGACGCTACGACACACGGACCTTGCGCAATGTCGCCAAAGAAT TGGAGGTGAAGATGCTTTGGACACTCTATGTCccgcttgtcttcctcctc cagaatGGACTGGTCCTCGTGGTTCTTCTCTTGGGGGGCCACCTGGTTTC GGACGGCGGTTTGTCCGCCCGGTCCTTGACCGCCTTCTACTTCTACAGCA CGACAATTACGGAGGCGATGCAGTCACTGGCAGACAACGTCTTGAGCATC CTCACAGGCCTCGGGGCCGGTGAGAAGATCATGGATATCATCGCCCACAA GCCCACCATCCCGGTCAAAGGAGGCACGGTGCCGTCTTTTGCGGCACGCG tagcccctttctccccaccaattgtctcctccagcatgtcCGTGCCCAAG GCCTTGCCTGCACCGAGATCGTTCGACCTGGTCTTCGATGACGTCTCCCT CACGTATTCCTCCGAAACGGATTCCCATCAGTCCCTTCATCGGGCgcctg tcctctcccacctgaACCTGCGGATCCCCGAGGGACAACGCGTTGCGATC GTGGGCCTTTCGGGGTCGGGGAAATCGTCGCTCATCTCCTTGCTTTTGCG CTTTTACAAGCCGACCACCGGACGTATCTTGTTCGGAGGCCACGACGTCC AGAGCCTGGACCCGCGTTGGCTCAAGGCGCAGCTTGGCGTGGCTCTCCAA GATCCCATGCTTTTCGGCGGCATTTCAATCCGGGAGAACATCACGTATGG TCTGGAAGGTAttcaggaggaggcagttAAGCAGGCAGCGCAAATGGCGG CAATTCACGATTTTATTCTCACCTTGCCCCATGCCTACGACACGGTGGTG GGTGAGAGGGGGGTAACTTTGTCAGGGGGAGAACGTCAGAGAGTCGGCAT TGCCCGGGCCCTGCTGCGTCGACCAAAAATTATTATCATGGACGAGTGTA CGAGTAGCTTGGATTCGCTTTCGGAGAGCAAATGTCAAGAAGCATTGATG GCTTTGCACCGTACGCAGCCGTCTATTACCCTACTGACCATCGCCCACCG CTTAAGCACCGTAGTAGACGCGGACCGCATCCTTGTGATGGCCAAAGGCA AAATTGTAGAGGAGGGAACCCACAAGGAGCTTCTGCTCAGGGAGGGCATG TacaaggagctggtggtgcatcagctgcaggaggaggttattcACAAGAA ATTGTCCGTGTAAATGGGTTTCGACTACGCTCGAAGTGCCATCATAAAGT CTCAGGTGGTGGCCATAGCCGTGGCCTTGGCGCTGGCGCTTGACtccccc ggcctcctgcTGCTTTATTTCTCTCAATCGGGGTTCTCCACTTCCACCGC CTACAAAAATGGAGTTGCAGACTATAGTTTCAAAAAAAGTGTCAGCGATA TCTTGGGTTTGAATTTGCTAAAAGCTTGCGTGTTATGCGCCTTTTGGTCC TTTGCCCATGGGCGGCTCCTGGCTCTAATCCTCCCTGTCGTAGCGACAGG ATTTTGCCTGATTAAAATGGCCGTCTATGATGAGTGGAACTCGCGCAATA AAATTGTACCAGCGGTGGTGATGGTTCTATCCTCGCTTTCCGCGATGGTG CAGCTTGTTGGCGTGTGGAAGACTCAGAGTACGACCAGGGATCCGGACGC AAGCTTAGCGGAGAGCCTAGAGGGGCGGGAATGGGTTGACAATAGGGAGG TAGCACGCGTGGAGGACAAAAAGAAAGGTACATCGCAGCACTCGGGCGCT GCAATGGGTAGCAGTGGTTTTGGAGGCCTGGCTGATGACGGTGGAAAGGC GGATGCCTACCGGCTGCTTATGGACGACCCGGAcaacgaagaggagggcc atGTGCCCGGCGCCGGTGGTGACAGGGACGCGACGGACACAAAAAGTAGC ATGGCGGCATCAGTACCCCCGAACATGCCGTCGGTTCGACGGCCCATGCT GTTCCTGCTCTATCACTACGCCCGCCCCGACCATGGCCTTCTCTTCGCCG GCCTCTCCTTTATTATCCTCAGCTCACTATTCAAGCTGGCCATCCCCAAT TTCGCTTCATCGCTGCTGACCCTCATCATAGAAGGTGCCACAGCCACACC CCCGGTGCCCACTCTCCACACGGCGCAATTCCGGGAGGCCTTGTTTTATT TCCTAGTATCCGTCCTGGGCCTGGCATTTTTCACCTCTCTTCGTATATGG ACGACCGCCAAGGCAGAGGTCCGATTGGTGGCGAGGCTGCAGAGGATCTT GTTCTTCGCGATCCTCCACCAAGATGTCGCCTTCCACGACGCGCAAGGAA CGGGCGCGTTGACCTCGCGGTTGACCTCCGACTGTACGCTGCTCGGATCC ATATTCACGACCAATTTCAATGTGGCCATCCAAGCAGCGATCAATTTGCT CGGCTCCACGGCTTTCTTGTTCGTTTTGGACGCGCGCCTGGCCGGGGCCT ACTTGGCCCTGGTCTTGGCTTTCATGCTCTTGACCCGTGTGTTCGGCGCC TACGCCAAGAAAATGCAAAATCAAATTCAAACCCTTAAAGCAGAGGCCAA CGCCGTGGCCGACCAATCAATCGCCCTGCTGCGGTTGGTTCGAGCCTTTG CCACTGAAGACTGGGAGAAAGGACGCTACGACACACGGACCTTGCGCAAT GTCGCCAAAGAATTGGAGGTGAAGATGCTTTGGACACTCTATGTCccgct tgtcttcctcctccagaatGGACTGGTCCTCGTGGTTCTTCTCTTGGGGG GCCACCTGGTTTCGGACGGCGGTTTGTCCGCCCGGTCCTTGACCGCCTTC TACTTCTACAGCACGACAATTACGGAGGCGATGCAGTCACTGGCAGACAA CGTCTTGAGCATCCTCACAGGCCTCGGGGCCGGTGAGAAGATCATGGATA TCATCGCCCACAAGCCCACCATCCCGGTCAAAGGAGGCACGGTGCCGTCT TTTGCGGCACGCGtagcccctttctccccaccaattgtctcctccagcat gtcCGTGCCCAAGGCCTTGCCTGCACCGAGATCGTTCGACCTGGTCTTCG ATGACGTCTCCCTCACGTATTCCTCCGAAACGGATTCCCATCAGTCCCTT CATCGGGCgcctgtcctctcccacctgaACCTGCGGATCCCCGAGGGACA ACGCGTTGCGATCGTGGGCCTTTCGGGGTCGGGGAAATCGTCGCTCATCT CCTTGCTTTTGCGCTTTTACAAGCCGACCACCGGACGTATCTTGTTCGGA GGCCACGACGTCCAGAGCCTGGACCCGCGTTGGCTCAAGGCGCAGCTTGG CGTGGCTCTCCAAGATCCCATGCTTTTCGGCGGCATTTCAATCCGGGAGA ACATCACGTATGGTCTGGAAGGTAttcaggaggaggcagttAAGCAGGCA GCGCAAATGGCGGCAATTCACGATTTTATTCTCACCTTGCCCCATGCCTA CGACACGGTGGTGGGTGAGAGGGGGGTAACTTTGTCAGGGGGAGAACGTC AGAGAGTCGGCATTGCCCGGGCCCTGCTGCGTCGACCAAAAATTATTATC ATGGACGAGTGTACGAGTAGCTTGGATTCGCTTTCGGAGAGCAAATGTCA AGAAGCATTGATGGCTTTGCACCGTACGCAGCCGTCTATTACCCTACTGA CCATCGCCCACCGCTTAAGCACCGTAGTAGACGCGGACCGCATCCTTGTG ATGGCCAAAGGCAAAATTGTAGAGGAGGGAACCCACAAGGAGCTTCTGCT CAGGGAGGGCATGTacaaggagctggtggtgcatcagctgcaggaggagg ttattcACAAGAAATTGTCCGTGTAA back to top
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