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Properties
| Property Name | Value |
|---|
| Product | nad-dependent epimerase dehydratase |
| Orig transcript id | gnl|cribi|Naga_100008g75.7926.mrna |
| Orig protein id | gnl|cribi|Naga_100008g75.7926 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1004942..1007189 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2704 ID=rna2704|Name=rna2704|organism=Nannochloropsis gaditana|type=mRNA|length=2452bp
CAGGCGCGGGTGGCGGAGCGGGTTGTGTAAGTTCTTCATTCCTCGCGAGC
CTTTCCGTGTTCCAGTGGGCCGTCTTTGCTATTTTTTCGTCATCATCATC
ATCATCATCGTCATCCAAAAGGATAAATTACCATGAACATGCGGTTGCGC
AGAATAGTCTATGTGATTCTCTTTTGTGCATTGGCATTTCAACACGTCCA
GACCTTTGCAACGACGGCAGAATCAGCCGAATCGGTTCCTGTCCTCGACG
AGTGTCTTGATGAAGACCTGCCGCAAGCACCCAAGAAGGTGGAGGTGGAG
GCCCGTCCTCGCGCCCCTAGGCTAGGTGATGTAGTGGCCAATGTTAAAAA
CAAGGTCCCTGTCGAAGTGCCGGGGTGGTTTGCCGGGATGTGGTCAAGTA
TGAGGCAAATTGCGGCCCCGCACGTCCAGAAGGTGATTGAGTACGGTGGG
GAAATGCTCCGTCCTGGGGAGGAGATAGCAGACCGGTGCAAGAGGAGACG
CAAAACGAGGACTTCCTCAACAGAGGGAGGTCTAGACGCTTGTGCGTTGC
TTGATGTCTCCTGGTCTCTGGGTCGACAGTTGGGTGCACTCAGCAGTAAC
GCGTCGAGCAGGACAGCGTGGTGGTTGGCGCGGGAAGTGCCCCGAGTCAT
CCTTCCCTTCCATCTCTTGTGGGTGGATGTGGCGGTAGATATCAGCCCCG
TCACGAGCAGCGACGTCGCGTCGATCATCCTGCACCAACGTCCTTATTGG
GTAGTGCAAGCCTGCGACGTATTCTCCGCCTTTTTCGCGCGGGTCCTCCA
GCGACTCCCTATGCTCGACTTTTTGATGAACGCCCGCTACGACAAACTTT
ACATCCACGACCCGGCATGCCCCCTCGTGCAGGTTGACGGCCTCGTCTTT
CGCGCCCCCCTCACGCCCGACGGCTTCTGCGAGACGCGGCCTTGCCAAGG
AGAGTCCTCGATCACCGGCCAATTTCCCCCCGGGGAGCACGCTTCCTACT
GCGAATGCGACCTGCCCACAGGTTACTGCCGGCTGCGGGTCGAGCCTCTC
CGCGACTTCCAAGTACTGGTCGACGAGCCGCTGGCTTTCAAGCGTTTCGC
CGCGCACGCCAGCAGCGAGGTGGCGTGGGTGACCGTGCCGGAGTGGTTGC
CTCCCTGGGCACGATTGACCTTTCAAGGGCTATTCCCCCGCTACCTCTTC
AATTTCCTGGTGGGAATCATCCTGCTCTACTCGGCGGAGACCCTGGCTGA
GTCCAGGCTCTTCCACGCCGGCATAGCTGCCCTTTTGGGCCTTTTTTCCG
GTCTAGTGCTGGCGGGGCTGCTCCTCAACCACGTCTTCCGCACGGTCAGG
CGCCTGGAGCCTTTCTCTGGCCTGGCCACGCTCCTCACGTCCGCCACAGC
TATGCTCTTGTACCAACGGCTCGGCCGGCACTCCCTTCTCCCCCTCACCC
AACAGCTCCTGGGGGCTCTGTGGGCGGATGGGAAAGGGCAACTGGTGATT
GTCGCCTGTGCCCTGCTCGGAGTGGGCTTGACTTGGGGCATGGGATGGTT
TCTCGAGACCGAGGAGGAGGCGAAAGAGCGCCCAGGCTGGCTGCACCTGT
ATTTCAACGGACAGCACAACATCCGGGTCGCTTTGACGGCGGTGGCGCTC
TTTTTCCTATGGCGCGCGGTGCCCACGCCCGATCTGGGCGTGCTCCTGCT
GCTGCTGGTGCTGACACGGGGTTTTTGGGGCCACGCCTTGCACCGACTCG
ACATGTACCTGCACCGGAGTCCCCAGACACACCGCTTCCTGGCCCGGGCA
TCGACCTTCGCACCTGCCGGCTCCTGGAGGAGCGAGAGGCGACCGCGGGC
ACGAATCGGGGATGAGGTAGAGGAGGAGGAGGAGGAGGAGGATTATACGA
CGAGGGAATTGCAGAAATTGCGTGCCTACGTGCAGCGATATCCGGAGGCG
ACCCACCGGGTGCGGCACGGGAAGATGGATCTGGCGCGATTCCGGGAGGG
AGGAGAGGACTTTCTGGTGGAGGAAGAGGACGAGGACGCGGAGAAAGGAT
GGGAAGGGAGGAGGGTTGGCTGCTGCGTACAGTAAAGTCAACGACCGAGA
GGAAAGTGCAAAACATCGAGGAAAGGACACGACCGTGGGACAAGCGGGGA
GATGGGGGAATGGATGCGGTAGGGTGGGGGCGAGGGGGCTGCGATGGAGG
TGGGTAGAAGCTGTGCATATCAATTGACTGAGCGTGTGTATAAATGTGTG
TGGCATTCCGTATCGGTGGAATGAAAATAAAGTCTCATGTGCAAATACCG
TGACTTGCTTTCCGACAGTAGTTGCTCTAGAGCGAGCCTTACGGACCAAG
GCGCTCAGCCACCCCTACTTGCCTGGGGTCGCGTGAGGGCTTCCATGTCC
ATGGTTGAAAACAAAGAAATTCATCCACAATAAGTCTGACAAACACGACA
CA back to topprotein sequence of rna2704 >rna2704-protein ID=rna2704-protein|Name=rna2704|organism=Nannochloropsis gaditana|type=polypeptide|length=391bp
MLETDIVTTRIMNVFSNIVNRFGRESQDGALTPSTIQRTVVVVTGATGYI
ASHIVRVLLENGFKVRATVRDPSNKARLKFLSDLPGASERLTFHKADLLA
PGSFDEVCAGATCVIHTASPVPLEMPDDPNAAVVVPAVEGTKNVFESILK
AGSIKRVVLTSSIRAVFGFGNEKPPGYVYSEEDWNTTSRLENNQAYSLSK
TLAEKTAWEYAEKAGKDGKKPEWDLVAIQPGLVFGPSLSGREDSMSLTLF
KNLVTGHQSGMVNLAWGVVDVRDVATLHVAALTNTQASGRYIATSATLSF
QEIIDTVRAKINRRLPRYAVPKAFLWIGYYSGLAGKQLSWEDIAYNVGNP
VLFSNAKATKELLPEGFIEPAKTFGDMYDNLTEVGIIPEGN back to topmRNA from alignment at CM002459.1:1004942..1007189+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2704 ID=rna2704|Name=rna2704|organism=Nannochloropsis gaditana|type=mRNA|length=2248bp|location=Sequence derived from alignment at CM002459.1:1004942..1007189+ (Nannochloropsis gaditana)
CGTTGCCGTTacatttccttcttccttgaAGGCGGACTCGGACCACGCGG
CCGGGGATGGCCtatgctggtggaggagggccattTGGACGCAGACTTTC
GCTCTGACATTGTCGTATGAGAGGCAGGATGGTTTGCAAGGGTCCCAATC
GGCAAAGAATTCCTATACGGGAATTGTTTTCCCCTAGACTTTGCGAACCG
ATTCGATCTGCCGAAACCTTTTGAACCTtattccttttcttccatgcTCG
AGACAGACATCGTTACCACCAGGATCATGAATGTATTCAGCAATATAGTC
AATCGATTTGGCCGGGAGAGTCAGGATGGCGCCTTAactccctccaccat
ccagcGGGTACGTGATATCTTCACACTTGTcacagggcgaggggagtTCT
TTCCACCGCTAAAGGCAGCCAGGGTTCACTTGTATGAAAAATGTCGAAAT
CATATATTTGCATAACTTCATAATGAGTACGACACACCACACGTCAGACC
GTTGTGGTAGTGACGGGTGCTACAGGCTATATTGCGAGCCACATCGTCAG
GGTGTTGTTGGAAAATGGTTTCAAAGTTAGGGCAACGGTCCGCGATCCCA
GCAACAAGGCGCGTCTGAAGGTAAGCATTAAGTACGAATTTGTGCACGAA
CGCTTGGCTAATCTTGAATTTCCTTCTCAGTGAAGCTGGATTCAATCTAC
CGTTCACCCTCAACAGAAGATTTTGTGCCCCCGCGGCGAGACCAAATTCG
AACGGATTGTCGATAAACAGTCAATTACCGCTTACTGATCTCTCCTAAAT
GCCTGATTCCGCCATATTCCAGTTCCTCAGCGATCTTCCCGGAGCGTCCG
AGCGGTTGACTTTCCACAAAGCCGATTTACTGGCTCCCGGCTCGTTCGAC
GAGGTATGCGCTGGCGCCACTTGCGTTATTCACACGGCCTCCCCCGTGCC
TCTGGAAATGCCTGATGACCCGAACGCAGCCGTGGTCGTTCCCGCCGTAG
AAGGTACAAAGAATGTGTTCGAGTCGATTCTCAAGGCAGGGAGCATCAAG
CGTGTGGTTctgacctcctccatccgcgcCGTCTTTGGCTTTGGGAACGA
GAAACCTCCCGGATACGTGTactcggaggaggattgGAACACGACATCCA
GGCTGGAGAACAACCAGGCGTACAGCTTGAGCAAGACCCTGGCCGAGAAG
ACAGCGTGGGAGTATgccgagaaggcggggaaagacgggaagAAACCTGA
ATGGGACCTGGTAGCGATTCAGCCGGGCTTGGTCTTCGGCCCATCCCTGT
CCGGGCGAGAGGACTCGATGAGCCTGACTCTGTTCAAAAACCTAGTAACG
GGCCATCAATCAGGCATGGTGAATCTGGCCTGGGGTGTGGTTGACGTCCG
AGATGTCGCCACCCTGCACGTGGCCGCCCTGACCAACACTCAAGCCTCCG
GGCGCTACATCGCCACAAGTGCCACGCTCTCCTTCCAAGAGATCATTGAC
ACGGTTCGCGCCAAAATTAACCGCCGTTTGCCCAGGTACGCGGTGCCCAA
GGCCTTCCTTTGGATTGGGTATTACTCAGGCTTGGCGGGGAAGCAGCTCT
CTTGGGAGGACATTGCTTACAACGTGGGAAATCCTGTACTCTTCAGCAAT
GCAAAAGCTACGAAAGAATTGCTTCCAGAAGGCTTCATCGAGCCAGCGAA
AACGTTTGGAGACATGTACGATAATTTGACTGAGGTCGGCATCATTCCCG
AGGGTAATTAAAATCATCATGTATgccaggaaagagaggattTGTCCGTT
GGCGTCGGGGCTCCTGATTCATAGCATGTGTGAAAATCATCTACAGTCCA
CGGACGCTGAAGCACTTAGATTACTAACACGTTAGAAGATGCGCGCATAA
AGCGGCAAAAAAATTGGACAAAAGAGGGCAGTACGCTGGAGAATGTTCAT
GGCCAATAGACGAGGCAAAAGCACCTTCTGAACACACGTAATCTATGAAC
TTCTACAAGTCCTGGTTCAGAATTGTTGTTTTTAAAACGTACGCAATTAT
TCGGTAGCCCATCAATAAATGATAGATAACGATGTGACAAGGATGAACGA
GAGGTTAGGTTTCCAGTAAAAATATTCAGTAAGAAACGAGATGAAACGGC
CGTGTGTGCAAAAGAAAGGAATTCATGCAAAGGAAAGAGTGGCCAAGGCC
CTAAAATTTTCAGGCAGGCTCAATTCCTACTTTTGGTTCGTGCTTCGT back to topCoding sequence (CDS) from alignment at CM002459.1:1004942..1007189+ >rna2704 ID=rna2704|Name=rna2704|organism=Nannochloropsis gaditana|type=CDS|length=3528bp|location=Sequence derived from alignment at CM002459.1:1004942..1007189+ (Nannochloropsis gaditana)
atgcTCGAGACAGACATCGTTACCACCAGGATCATGAATGTATTCAGCAA
TATAGTCAATCGATTTGGCCGGGAGAGTCAGGATGGCGCCTTAactccct
ccaccatccagcGGACCGTTGTGGTAGTGACGGGTGCTACAGGCTATATT
GCGAGCCACATCGTCAGGGTGTTGTTGGAAAATGGTTTCAAAGTTAGGGC
AACGGTCCGCGATCCCAGCAACAAGGCGCGTCTGAAGTTCCTCAGCGATC
TTCCCGGAGCGTCCGAGCGGTTGACTTTCCACAAAGCCGATTTACTGGCT
CCCGGCTCGTTCGACGAGGTATGCGCTGGCGCCACTTGCGTTATTCACAC
GGCCTCCCCCGTGCCTCTGGAAATGCCTGATGACCCGAACGCAGCCGTGG
TCGTTCCCGCCGTAGAAGGTACAAAGAATGTGTTCGAGTCGATTCTCAAG
GCAGGGAGCATCAAGCGTGTGGTTctgacctcctccatccgcgcCGTCTT
TGGCTTTGGGAACGAGAAACCTCCCGGATACGTGTactcggaggaggatt
gGAACACGACATCCAGGCTGGAGAACAACCAGGCGTACAGCTTGAGCAAG
ACCCTGGCCGAGAAGACAGCGTGGGAGTATgccgagaaggcggggaaaga
cgggaagAAACCTGAATGGGACCTGGTAGCGATTCAGCCGGGCTTGGTCT
TCGGCCCATCCCTGTCCGGGCGAGAGGACTCGATGAGCCTGACTCTGTTC
AAAAACCTAGTAACGGGCCATCAATCAGGCATGGTGAATCTGGCCTGGGG
TGTGGTTGACGTCCGAGATGTCGCCACCCTGCACGTGGCCGCCCTGACCA
ACACTCAAGCCTCCGGGCGCTACATCGCCACAAGTGCCACGCTCTCCTTC
CAAGAGATCATTGACACGGTTCGCGCCAAAATTAACCGCCGTTTGCCCAG
GTACGCGGTGCCCAAGGCCTTCCTTTGGATTGGGTATTACTCAGGCTTGG
CGGGGAAGCAGCTCTCTTGGGAGGACATTGCTTACAACGTGGGAAATCCT
GTACTCTTCAGCAATGCAAAAGCTACGAAAGAATTGCTTCCAGAAGGCTT
CATCGAGCCAGCGAAAACGTTTGGAGACATGTACGATAATTTGACTGAGG
TCGGCATCATTCCCGAGGGTAATTAAatgcTCGAGACAGACATCGTTACC
ACCAGGATCATGAATGTATTCAGCAATATAGTCAATCGATTTGGCCGGGA
GAGTCAGGATGGCGCCTTAactccctccaccatccagcGGACCGTTGTGG
TAGTGACGGGTGCTACAGGCTATATTGCGAGCCACATCGTCAGGGTGTTG
TTGGAAAATGGTTTCAAAGTTAGGGCAACGGTCCGCGATCCCAGCAACAA
GGCGCGTCTGAAGTTCCTCAGCGATCTTCCCGGAGCGTCCGAGCGGTTGA
CTTTCCACAAAGCCGATTTACTGGCTCCCGGCTCGTTCGACGAGGTATGC
GCTGGCGCCACTTGCGTTATTCACACGGCCTCCCCCGTGCCTCTGGAAAT
GCCTGATGACCCGAACGCAGCCGTGGTCGTTCCCGCCGTAGAAGGTACAA
AGAATGTGTTCGAGTCGATTCTCAAGGCAGGGAGCATCAAGCGTGTGGTT
ctgacctcctccatccgcgcCGTCTTTGGCTTTGGGAACGAGAAACCTCC
CGGATACGTGTactcggaggaggattgGAACACGACATCCAGGCTGGAGA
ACAACCAGGCGTACAGCTTGAGCAAGACCCTGGCCGAGAAGACAGCGTGG
GAGTATgccgagaaggcggggaaagacgggaagAAACCTGAATGGGACCT
GGTAGCGATTCAGCCGGGCTTGGTCTTCGGCCCATCCCTGTCCGGGCGAG
AGGACTCGATGAGCCTGACTCTGTTCAAAAACCTAGTAACGGGCCATCAA
TCAGGCATGGTGAATCTGGCCTGGGGTGTGGTTGACGTCCGAGATGTCGC
CACCCTGCACGTGGCCGCCCTGACCAACACTCAAGCCTCCGGGCGCTACA
TCGCCACAAGTGCCACGCTCTCCTTCCAAGAGATCATTGACACGGTTCGC
GCCAAAATTAACCGCCGTTTGCCCAGGTACGCGGTGCCCAAGGCCTTCCT
TTGGATTGGGTATTACTCAGGCTTGGCGGGGAAGCAGCTCTCTTGGGAGG
ACATTGCTTACAACGTGGGAAATCCTGTACTCTTCAGCAATGCAAAAGCT
ACGAAAGAATTGCTTCCAGAAGGCTTCATCGAGCCAGCGAAAACGTTTGG
AGACATGTACGATAATTTGACTGAGGTCGGCATCATTCCCGAGGGTAATT
AAatgcTCGAGACAGACATCGTTACCACCAGGATCATGAATGTATTCAGC
AATATAGTCAATCGATTTGGCCGGGAGAGTCAGGATGGCGCCTTAactcc
ctccaccatccagcGGACCGTTGTGGTAGTGACGGGTGCTACAGGCTATA
TTGCGAGCCACATCGTCAGGGTGTTGTTGGAAAATGGTTTCAAAGTTAGG
GCAACGGTCCGCGATCCCAGCAACAAGGCGCGTCTGAAGTTCCTCAGCGA
TCTTCCCGGAGCGTCCGAGCGGTTGACTTTCCACAAAGCCGATTTACTGG
CTCCCGGCTCGTTCGACGAGGTATGCGCTGGCGCCACTTGCGTTATTCAC
ACGGCCTCCCCCGTGCCTCTGGAAATGCCTGATGACCCGAACGCAGCCGT
GGTCGTTCCCGCCGTAGAAGGTACAAAGAATGTGTTCGAGTCGATTCTCA
AGGCAGGGAGCATCAAGCGTGTGGTTctgacctcctccatccgcgcCGTC
TTTGGCTTTGGGAACGAGAAACCTCCCGGATACGTGTactcggaggagga
ttgGAACACGACATCCAGGCTGGAGAACAACCAGGCGTACAGCTTGAGCA
AGACCCTGGCCGAGAAGACAGCGTGGGAGTATgccgagaaggcggggaaa
gacgggaagAAACCTGAATGGGACCTGGTAGCGATTCAGCCGGGCTTGGT
CTTCGGCCCATCCCTGTCCGGGCGAGAGGACTCGATGAGCCTGACTCTGT
TCAAAAACCTAGTAACGGGCCATCAATCAGGCATGGTGAATCTGGCCTGG
GGTGTGGTTGACGTCCGAGATGTCGCCACCCTGCACGTGGCCGCCCTGAC
CAACACTCAAGCCTCCGGGCGCTACATCGCCACAAGTGCCACGCTCTCCT
TCCAAGAGATCATTGACACGGTTCGCGCCAAAATTAACCGCCGTTTGCCC
AGGTACGCGGTGCCCAAGGCCTTCCTTTGGATTGGGTATTACTCAGGCTT
GGCGGGGAAGCAGCTCTCTTGGGAGGACATTGCTTACAACGTGGGAAATC
CTGTACTCTTCAGCAATGCAAAAGCTACGAAAGAATTGCTTCCAGAAGGC
TTCATCGAGCCAGCGAAAACGTTTGGAGACATGTACGATAATTTGACTGA
GGTCGGCATCATTCCCGAGGGTAATTAA back to top
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