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Properties
| Property Name | Value |
|---|
| Product | transferase caf17 mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100008g73.7884.mrna |
| Orig protein id | gnl|cribi|Naga_100008g73.7884 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1000784..1002434 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2702 ID=rna2702|Name=rna2702|organism=Nannochloropsis gaditana|type=mRNA|length=1988bp
AGTCGTTACCAACCGTGTTTCTCGCTGTCTTTCCCCGTAGGTTGGAGTGA
ATGTTGTTTCGGGATTGCCTTGAGGCCGCCGGGAAGATCAGACGGAGGTA
AAGAAGTACAACATAGGGCCGGACTTGACTTTGCCTGGGCCAGCTGCACC
TGTTGTGATGTCCAGTTCCCAGGACACGACATCTGGTTCAATTGGGATGA
CCATCAATGCAAGTCCTGAGAAAAGTTGTACTTGTCTCCCGAAGTGTTCA
AAGACAACGGATGAGATTCGTGGTCCGGACGGTTTGCAGAGCCAAGAAAC
TGTCATGCTTATTCCAGGATCGACGATTCGGGGCACAGCATTCAGTCCTC
TGGACGATGTGACGGCGAGAATAGCTTCCTGTACTGTCATAGACGAAGAC
TCAGCGCATGTGCAACCCGGAGCAGTTAGCAACGACGGAAACTCTTCTCA
AACATGCAACATCCCCGGACATTCGGATCGTGCGACGATTTCTTCCTACC
CCCCAGCATTAGCCCTTCCCCGCCACAGCTGGGGACATACGTCCGCATCT
TCGTTTCGCGTGCGCAGCCGGCACTATAAGCGTGCAAAGAAGAAGGAGCC
ATCCTTGGAGGCCTTCTACAAACTTGTTTCGTTCGACCTGATCAAGGCCA
GCGTGGGATGTGTGAATCATGTTGGCCGTTTGATGGATCTGGAGAAGGTG
CGTCCAGCCCGCAGTTTTCCGGGCTTGCCTCCATTGTTCATAGTCAACAC
ACAACTGCCAGACGGAGAGCCCGCCATGTTCAATGCTTCGGACAACGGGC
CTGGCCGGAGTGCCATTTTTGTGTTCGCCTTAAAAGAGTCCACCGTGGAT
ATGCTGGAGGCGCATGCGGACAGCCCCTCAGCGGCCGTACGGGAAAGGAA
GGGGAAGGATCACAGAGAAGCCTTCAGTGTGCCTCCGGCATTGCAGCTTC
TACAGGAATACTTTCGTCGGGCCCCGCATGACCCCGACGTCAGGGGTCGG
CTCAAGGTGATTGCCAGTTGCGCTAATATGGACGCGCTGCACTTGCCGTC
ATTCATTTCGAACTACAACGGAAAGCCCGTTCTCATCACCAAGTCCGGTC
GCCTCCACCAGGGGATTTCCTCCTCGAACGGGGAAGACTTATTGTACATA
GAGATGGACATTTGCGTGCATCGGTTCGCATATGTGGCGAGGAAAGGATT
TAGGTACCTGCAAAAGAGGTTTTCAAAGATGATTTTGGATATCGCTTTTC
TGGTAGAAGGACGAGAGGAGGATGAGCTCCCGGAACAAATTTTGGGCGCA
GCGAGACTGAACAACGTAGACTATGAGGCGGCGGTGGAGGGAGATTTCGA
TGGGCTGGGAGGGGAGGTGCCGTCGGGGGGAGGCCGAGACACAGGAGCGC
ACGGGGAAAGAAAAAGCGGAGTGTCGCGATGACCGTCTTGAGGGGGGGAA
ATTTCGGGGAGGCGGCAGGCAATAGGTGTATTTTGGTGACTGAACAGTCT
CGGAGTTTCGTCTTCAAGGAGGGAAAGCACCCACCACAGGAACATACAGG
CCCGTGTCCTCTTTTTGTACGATAATTGTTGGTCGGCGAGTGTGAGCAAA
TGGCATCGGGAGGCAGTGGCACGAGGGGAATGCGTCAGAGCCGAAGTTCA
AAGCAGCATAGACGTAAATAATTGCCAGCTTCTCCCGGTCAAATCTTCTC
GGACTTATTCTTCTCTCCCTCCAGTCGCCTGAAAACACGTTGCCAGGCAG
GCAACATCTCACCGGACTCCAGATCGGCCATATGACCCTCAAATTTATGA
CCGAACCCGTATTTAACCCACTTCCCTTACACTGCCACCCTTGACACCTC
AATCGCTTCCTCGCCCGCAACCCTTGATGCCCTTGCTCTTCCTGTAGTCG
CTCGTTACGCCCCTCTCTTTCCTTGTGTAACACGTTCAACTACTCAGCAA
TTCCCAGCTTGAGACAACGCAGTTTACCGAGAAAACTT back to topprotein sequence of rna2702 >rna2702-protein ID=rna2702-protein|Name=rna2702|organism=Nannochloropsis gaditana|type=polypeptide|length=471bp
MRASFTRRSLAVVTCYERCASMTGSTTCAARVRTSLEEIPTSLFRFQEIR
RPGPTKPQRSRYSSATSTWDPQILATEGKLWEVDLTSGEGDGRRGVIQLA
GPEAPKLVQGLITNDIIHLTGSKASLAAGFLTNKGRLITESVITIATDAK
EAPHGGPDKFFLDVPIDVKKGLLQHLRLFKLRSKVTITDLSSTARVCALV
GLPHARVSDLERVREHWSARGAEVLGLGPDPRVMLGDRFPLGIRGIIHFP
DPSSPPSSLPSSARPLPCTQEAREALEALRFLYGVGEGPDLVERLPSECN
LDLTHAINFHKGCYLGQELTARTQFKGVIRKRLLPVFLFPDSLPPPSSKV
EADMQRPVQKLGDLLLPSNANPLAAPFLAGPPSPSPALVKGAEIIDKASG
KAVGSLVSLATGSNLGLALLRLEPTLGAEQGVKLVARSPGAEGEKRQQQV
LAFLPDWWPSGIDLATGKIPL back to topmRNA from alignment at CM002459.1:1000784..1002434+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2702 ID=rna2702|Name=rna2702|organism=Nannochloropsis gaditana|type=mRNA|length=1651bp|location=Sequence derived from alignment at CM002459.1:1000784..1002434+ (Nannochloropsis gaditana)
GGACCTCATTGCAACAAATATCCTTCGAGAAATGCTCATTCTTCTCCACT
ACACAGCCGATGCGTGCATCCTTTACAAGAAGAAGTCTTGCTGTGGTCAC
GTGCTACGAGCGGTGCGCTAGCATGACGGGTAGTACCACCTGTGCCGCAC
GAGTACGTACATCGCTGGAGGAGATACCTACATCATTGTTCCGCTTCCAG
GAAATCCGCCGCCCTGGACCCACAAAGCCACAACGGAGCCGTTATTCATC
CGCAACGTCCACATGGGATCCTCAAATCTTGGCGACGGAAGGAAAACTAT
GGGAGGTGGACTTGAcgagcggggagggcgacggcagGCGAGGGGTCATA
CAATTAGCTGGGCCTGAGGCACCAAAACTAGTCCAAGGATTGATAACCAA
CGATATTATCCATTTGACGGGAAGTAAAGCGTCTTTAGCTGCTGGATTTT
TGACAAACAAAGGTCGGCTCATCACCGAGAGTGTCATCACCATTGCAACC
GATGCCAAAGAAGCCCCGCACGGTGGTCCGGACAAATTCTTCTTGGACGT
GCCTATAGACGTCAAAAAGGGGCTTTTACAACATCTGCGCCTCTTTAAAT
TACGGTCTAAAGTCACGATCACAGATTTATCCTCGACAGCACGCGTGTGT
GCACTAGTCGGTTTGCCGCATGCTCGGGTTTCTGATTTGGAGCGAGTTCG
AGAGCATTGGAGTGCGCGTGGCGCGGAGGTGTTGGGCCTGGGACCCGATC
CTCGCGTCATGTTGGGAGATCGATTCCCTTTAGGCATCCGAGGCATCATC
CATTTCCCcgatccctcctcgcccccgtcaTCATTGCCCTCATCGGCCCG
GCCCTTGCCCTGCACGCAGGAAGCGcgcgaggccttggaggcttTAAGGT
TCCTGTACGGCGTGGGAGAAGGCCCCGACCTGGTGGAACGCCTTCCATCA
GAATGCAATCTAGACCTGACCCACGCCATCAATTTTCACAAGGGCTGCTA
CCTCGGCCAAGAGCTGACTGCCCGGACGCAATTCAAAGGCGTGATTCGGA
AGCGCCTATTGCCTGTGTTCCTCTTCCcagactccctccctcctccctcg
tccaaggTAGAGGCAGACATGCAGCGCCCAGTACAAAAATTGGgtgacct
cctcctgccgtcGAACGCGAACCCTCTGGCTGCTCCTTTCCTGGCCGGGC
CGCCCAGcccgtcgcccgccctcgtaAAGGGTGCCGAGATCATCGACAAG
GCAAGTGGCAAAGCCGTCGGGTCCTTGGTCTCCTTGGCGACAGGCAGCAA
TCTGGGCCTGGCGCTGCTTAGACTCGAACCCACTTTGGGGGCAGAACAAG
GGGTGAAGCTGGTCGCGCGCTCCCCGGGAGCGGAAGGCGAAAAGCGTCAA
CAGCAGGTCTTGGCTTTTTTGCCGGATTGGTGGCCGTCGGGAATAGACCT
TGCCACTGGGAAAATTCCGCTttaggggtgggggggggggggggcatgtt
gacgaagaggaaggcgactTGATACTCCAATAATTTTAAGAAGAAATGTC
AAATTTAAATAAATCTAAGGCGTTAAAGATGTGTCGTGTTTGTCAGACTT
ATTGTGGATGAATTTCTTTGTTTTCAACCATGGACATGGAAGCCCTCACG
C back to topCoding sequence (CDS) from alignment at CM002459.1:1000784..1002434+ >rna2702 ID=rna2702|Name=rna2702|organism=Nannochloropsis gaditana|type=CDS|length=1416bp|location=Sequence derived from alignment at CM002459.1:1000784..1002434+ (Nannochloropsis gaditana)
ATGCGTGCATCCTTTACAAGAAGAAGTCTTGCTGTGGTCACGTGCTACGA
GCGGTGCGCTAGCATGACGGGTAGTACCACCTGTGCCGCACGAGTACGTA
CATCGCTGGAGGAGATACCTACATCATTGTTCCGCTTCCAGGAAATCCGC
CGCCCTGGACCCACAAAGCCACAACGGAGCCGTTATTCATCCGCAACGTC
CACATGGGATCCTCAAATCTTGGCGACGGAAGGAAAACTATGGGAGGTGG
ACTTGAcgagcggggagggcgacggcagGCGAGGGGTCATACAATTAGCT
GGGCCTGAGGCACCAAAACTAGTCCAAGGATTGATAACCAACGATATTAT
CCATTTGACGGGAAGTAAAGCGTCTTTAGCTGCTGGATTTTTGACAAACA
AAGGTCGGCTCATCACCGAGAGTGTCATCACCATTGCAACCGATGCCAAA
GAAGCCCCGCACGGTGGTCCGGACAAATTCTTCTTGGACGTGCCTATAGA
CGTCAAAAAGGGGCTTTTACAACATCTGCGCCTCTTTAAATTACGGTCTA
AAGTCACGATCACAGATTTATCCTCGACAGCACGCGTGTGTGCACTAGTC
GGTTTGCCGCATGCTCGGGTTTCTGATTTGGAGCGAGTTCGAGAGCATTG
GAGTGCGCGTGGCGCGGAGGTGTTGGGCCTGGGACCCGATCCTCGCGTCA
TGTTGGGAGATCGATTCCCTTTAGGCATCCGAGGCATCATCCATTTCCCc
gatccctcctcgcccccgtcaTCATTGCCCTCATCGGCCCGGCCCTTGCC
CTGCACGCAGGAAGCGcgcgaggccttggaggcttTAAGGTTCCTGTACG
GCGTGGGAGAAGGCCCCGACCTGGTGGAACGCCTTCCATCAGAATGCAAT
CTAGACCTGACCCACGCCATCAATTTTCACAAGGGCTGCTACCTCGGCCA
AGAGCTGACTGCCCGGACGCAATTCAAAGGCGTGATTCGGAAGCGCCTAT
TGCCTGTGTTCCTCTTCCcagactccctccctcctccctcgtccaaggTA
GAGGCAGACATGCAGCGCCCAGTACAAAAATTGGgtgacctcctcctgcc
gtcGAACGCGAACCCTCTGGCTGCTCCTTTCCTGGCCGGGCCGCCCAGcc
cgtcgcccgccctcgtaAAGGGTGCCGAGATCATCGACAAGGCAAGTGGC
AAAGCCGTCGGGTCCTTGGTCTCCTTGGCGACAGGCAGCAATCTGGGCCT
GGCGCTGCTTAGACTCGAACCCACTTTGGGGGCAGAACAAGGGGTGAAGC
TGGTCGCGCGCTCCCCGGGAGCGGAAGGCGAAAAGCGTCAACAGCAGGTC
TTGGCTTTTTTGCCGGATTGGTGGCCGTCGGGAATAGACCTTGCCACTGG
GAAAATTCCGCTttag back to top
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