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Properties
Property Name | Value |
Product | pheophytinase |
Orig transcript id | gnl|cribi|Naga_100008g43.7873.mrna |
Orig protein id | gnl|cribi|Naga_100008g43.7873 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002459.1 | supercontig | CM002459.1:936679..938639 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2674 ID=rna2674|Name=rna2674|organism=Nannochloropsis gaditana|type=mRNA|length=2279bp CGCCAAGTCGGAAAAAAGCATTCGTACGACAAACCTGCTGGCAGAAGAAA TGGCTTAAGTCACGTCCTGTTTTCAAATCCATCGGCACAACATAACAATA ACTTTTATCCTTCGTAAACTGGCGTGCTACTCTTCAAGTTGCAACACAGG ACGGGACATGAACACGTAGCAAGTCTCCCAGCAGGCTTTCTTCCTTCTCG TTTTCATTCCAAGCGTCGAACGACCACCTGGCCCACGACGAGTACTTTGC CACAGCATTACCTGATCTGAGACGGCTGGCGATGGCCAGTGCCGTGGACC GCCGGGTTTTTGACCCCGATAAGAAAGCTTCCGTAAGGGTGCTGGACGAT TCAGCCGCGACCGCCAGGCGCCTGGTGGAGTCGCGTATCACGGCTTTCAC AGGAGAGTACGACTTTCTAAGCACGCTTTCGAAATCTCGTGTTGTACTTC CAGGAGAAGGCGTGATGGAAGGGGAGGGTTTTCAGGCTTACCCGACCGTC GAGCATGCGCTTCAAGCGTCAAAGAGCTCGGACCCTACGTACCGGCAATC AATCCTGTCCTCCAAAGACGCCCTGGAAGCGAAGCGTCGCGGCGCAAAGG CACCGAACGTGGACAAGCAGGCGTGGAAGCTTAAGTCCTTGGTGGTCATG GAAGCCTTGCTGCGCGACAAGTTCCGCAGGCACAAGGGGCTTCGGCAGCA GTTGATGAACACGGGTACCAAGCAGCTCGTGTACGAGAACGAGCACAACG ACCAGTTCTGGGGAACATGCAAGGGCAAGGGCCACAATCACCTGGGGCAG CTCCTCGAGCGAGTGCGCGCGGATGAGAAAGAGGGGCTTCTGGGTATATT GCTGTGGGCCAAGCAGGTCTTCAACGCCACGTCCGACTCCAAGGTGCGCC TTGACGTGAGCGTGACACGGGAGGGGCACCCTCTGCCCGAAGCAGATTTA ACGCTGGAGCGTAAAGCCATCGTCACTTTTGGGAAGCTTGCGGAAAACGA TGTTCCTGTCGCGCACCCGAGCACGAGCCGTTTCCACGCCATGGTGGTCG TCTCCCAGCCGTACGGTCCCTTGCTCGTGGACCTGGAAGCGGCTAACGGG AGCTTTCTCGATGAGCGTCGCCTGGAGCCTTTCAAAGGAGCGGCCCTCCA CTCTGGGGTCTCGGAGGTCGCGTTGGGCACTTCCTCTCGGCGGTACACCT TCACGTTCGACCTGGCCGCGGCCGCCAAACGCAGCCTGGCCTTGTACGAG GTGTTGGAGGACCCCTTGAAGCTGGCGGCGGCACGCCCGGAACTGGGTGT CTTCATGAACAATTTACCCAAAGATGTGACCGAGGAAATGGTGCGGGACT TCGTGGCCGACTGCGGCACCGTCCTGTCGGTGGCGGTGCCCCGGCACCGG ACGAGCCAAGAGCCCCGGGGTTTCGCCATTGTTATGTTCGGGACAGAGGC AGCGGTCGTGTCGGCCCTAAAGCTCGACCGGGACCTGATGGGGGGCTCGG AGGTTAGGGTGAGGCGGCGGAAGAAGGACGAGGAACATGGGCCGTCCGGG GGGGTAGGTCCGAGGGAGGCAAGGGTGGGAAACACGGGCAGCCGGTCTCG GGCCTCTGAGAGAGGGTCCCCGCGAAATGCTTCTCTGGCCATGTCCTCCG ACCCTCTCTCTTCCACAGATTCGCCTTCCATGACCGACGCTGCGGCCACC GCCTCGGCAAGGCTTCAGCAGCGCGCACGGGAGTCAAAAAGCGGGGAGGA TGAGAGGCGCCGGGGGAGGGAGGGAGGTGGCCGCCGTCACTCACGGAGTG GCAGCTCAAGCGCGGAGAGGAGAGAACGGAGGCGGGGGGGGCGTGAGGAA GAGGTGGATGGTCGATGCGGGAGAGACCGTGCGGGCTGGCGCGAGGTGCG CAGTGCCAGCCGGAGCAGAGAGCGGGTTAGAGGGAGGGAGAGGGAGAGGA GCCACAGGCATCGGGCTGAGCATCGTGACAGGCACTATGGCTCCCCGCGA AGAGAGAGAGGTCGCGATCGGAGCAGCGACAGAGTCTGGGAACCGTCTAG GAGCGGTCGAGGCGAGAGAGGTTCTGACAGATCTCGGAGCCGGGAAAGGC CTCGGCGGGGGGCCCGCAAGAGTCCTACTCCTCCGCGGAGACGCGCAGAG AGGAGATCTTCATCTTAAGGAAAAGAAGAAGGTGCTATGTACGCCAAGAC AACAGGAAGGGGAGACTTCTAAGCTGGACAAGTATTTCTTCGATAGGTGG CGCCCTAAGGGCAAGAATGGCCTCCCTGG back to topprotein sequence of rna2674 >rna2674-protein ID=rna2674-protein|Name=rna2674|organism=Nannochloropsis gaditana|type=polypeptide|length=461bp MPAAQTTQLIVAFVFLQVVDAFVLPPLPSCTTSTACVSFPRNSLWRSAMT TRRFVAFQDSKRTHESSEALAVKENEEEEELLELEGKYYQWKHGPVHYVE AGTEAATADTAAILLLPGFGVSSSHYERNIGPLAASGYHVFAIDYLGQGK SWPDKDPEKEDQLVLSIDTWSEQIISFIRDVIGRPVYISGNSLGGFLATT VAARHHEWIRGVVLLNSTPFWSFAPNRKKMHPWVKEAIIPYDGVLPAPRP LYEIGSRWYNSLRNKETVKAMLGAVYADEKAWGDRLVEQILVPTEHKHGQ SVFTSILFAPKPEHTFEETLAQLQQKNIPLLLLYGKEDPWIFPSWGQRVK RQVSLATYYELSPAGHCPHHETPVAVNALILEWLQKQNGGAGGGEDGGIG RGSKAMGSGVEGKERGEGPGGDRGSIRTYFEPVTGKQVTATLMDGRPRDT IEWLLANTVFR back to topmRNA from alignment at CM002459.1:936679..938639+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2674 ID=rna2674|Name=rna2674|organism=Nannochloropsis gaditana|type=mRNA|length=1961bp|location=Sequence derived from alignment at CM002459.1:936679..938639+ (Nannochloropsis gaditana) CTCCCAATCCGCTTTAGTCCGGTTGGAATTTGTTGGCGGCAGAAACGCCG
AGGGGCGGGTCCTGATTGCTAGCCTGCTTATTGAACCGGTACATCGTCCA
AAAATCAAGGCCTTCAACTATCCGTCGTTCATAGTACAACTCCATCGTCA
GCATGCCTGCCGCACAAACGACACAGCTGATTGTGGCTTTCGTGTTTCTT
CAAGTAGTCGACGCCtttgtccttccccccctacctTCGTGTACGACCTC
GACTGCATGTGTCTCTTTTCCCCGAAACTCTTTGTGGAGGAGCGCGATGA
CAACCAGACGCTTCGTCGCCTTCCAAGACAGTAAACGGACGCATGAGAGC
AGTGAAGCTCTAGCTGTCAAGGagaatgaagaggaagaggaactgTTAGA
ATTAGAAGGCAAATACTACCAGTGGAAGCACGGGCCCGTACACTACGTGG
AGGCAGGCACCGAAGCGGCTACTGCTGATACGGCCGCCATTTTGCTCTTG
CCAGGTAAGAAATTTTGTTCAGTTGCAAATATCTCGCCTGCACGTCGTCG
GTACACGACAGGGAATAGGAGGAATCACTGGCAGGCCTACATGCACTCTG
AAGGCCGTGCATTCCCTTAGTTGCacctctccctgtcctccttctcgcag
GGTTCGGTGTGTCCTCCAGCCACTACGAGCGGAACATCGGTCCTCTGGCT
GCATCAGGCTATCATGTCTTCGCCATAGACTACCTGGGGCAGGGCAAAAG
CTGGCCGGACAAGGAccccgagaaggaggaccaGCTGGTCTTGTCGATCG
ACACGTGGAGCGAGCAAATCATCTCCTTCATCCGCGACGTGATCGGGAGG
CCTGTCTACATATCTGGAAACTCATTAGGGGGATTCCTGGCCACGACTGT
GGCGGCCCGGCACCACGAGTGGATCCGGGGCGTCGTGCTGCTGAACAGCA
CGCCCTTCTGGTCCTTTGCGCCCAACCGGAAGAAGATGCACCCCTGGGTG
AAAGAGGTAAGCGGTTGTAGGGGTCTATTCGGTCGAAAAAAGGGGCAGCC
CGGGTTTTGCATGCTCGTGCAGGCAGGGGGTCCTGTGCGCCAAGATATTT
CCCTGACATTCCTCCAAAACCCGGCCAGGCCATCATCCCCTACGACGgcg
tcctcccagccccgcGACCCCTCTACGAGATCGGCTCCCGCTGGTACAAC
TCTTTGAGGAACAAAGAGACCGTCAAGGCCATGCTGGGCGCCGTGTATGC
GGATGAGAAAGCCTGGGGCGACCGGCTGGTGGAGCAGATTCTGGTCCCGA
CGGAGCACAAGCACGGCCAGAGCGTCttcacctccatcctcttcgcaCCC
AAACCCGAGCACACTTTCGAGGAGACGCTCGCCCAGCTCCAGCAAAAGAA
TAtcccgctcctgctcttGTACGGGAAAGAGGACCCGTGGATTTTCCCCT
CTTGGGGCCAACGTGTCAAGCGTCAAGTCTCGCTGGCCACCTACTACGAA
CTCAGCCCTGCCGGACATTGTCCTCACCACGAGACCCCCGTGGCAGTGAA
CGCCTTGATACTGGAGTGGTTGCAGAAGCAGaacggaggggcgggtggag
gagaagatgggggGATCGGTCGAGGCAGCAAGGCGATGGGaagcggggtg
gagggaaaggaaaggggggagggcccagGTGGAGACAGAGGAAGCATTAG
AACGTATTTTGAGCCAGTCACTGGGAAGCAAGTCACGGCTACCCTGATGG
ATGGTCGCCCCCGGGACACGATTGAGTGGTTGCTGGCAAACACTGTGTTT
CGGTGACCCGCGATGGGTCGGAGGGCGGCAGCGGGCCCGGCGCCTGGCGT
TCACTGTCgctgctcctgcttctcAATGTACAATGATCGATGGAATTGCG
TACAAACAGTACGACTTGAAAACACTTTAATCAAGAAACATATCGCGACT
GGTAATCAGAC back to topCoding sequence (CDS) from alignment at CM002459.1:936679..938639+ >rna2674 ID=rna2674|Name=rna2674|organism=Nannochloropsis gaditana|type=CDS|length=4158bp|location=Sequence derived from alignment at CM002459.1:936679..938639+ (Nannochloropsis gaditana) ATGCCTGCCGCACAAACGACACAGCTGATTGTGGCTTTCGTGTTTCTTCA AGTAGTCGACGCCtttgtccttccccccctacctTCGTGTACGACCTCGA CTGCATGTGTCTCTTTTCCCCGAAACTCTTTGTGGAGGAGCGCGATGACA ACCAGACGCTTCGTCGCCTTCCAAGACAGTAAACGGACGCATGAGAGCAG TGAAGCTCTAGCTGTCAAGGagaatgaagaggaagaggaactgTTAGAAT TAGAAGGCAAATACTACCAGTGGAAGCACGGGCCCGTACACTACGTGGAG GCAGGCACCGAAGCGGCTACTGCTGATACGGCCGCCATTTTGCTCTTGCC AGGGTTCGGTGTGTCCTCCAGCCACTACGAGCGGAACATCGGTCCTCTGG CTGCATCAGGCTATCATGTCTTCGCCATAGACTACCTGGGGCAGGGCAAA AGCTGGCCGGACAAGGAccccgagaaggaggaccaGCTGGTCTTGTCGAT CGACACGTGGAGCGAGCAAATCATCTCCTTCATCCGCGACGTGATCGGGA GGCCTGTCTACATATCTGGAAACTCATTAGGGGGATTCCTGGCCACGACT GTGGCGGCCCGGCACCACGAGTGGATCCGGGGCGTCGTGCTGCTGAACAG CACGCCCTTCTGGTCCTTTGCGCCCAACCGGAAGAAGATGCACCCCTGGG TGAAAGAGGCCATCATCCCCTACGACGgcgtcctcccagccccgcGACCC CTCTACGAGATCGGCTCCCGCTGGTACAACTCTTTGAGGAACAAAGAGAC CGTCAAGGCCATGCTGGGCGCCGTGTATGCGGATGAGAAAGCCTGGGGCG ACCGGCTGGTGGAGCAGATTCTGGTCCCGACGGAGCACAAGCACGGCCAG AGCGTCttcacctccatcctcttcgcaCCCAAACCCGAGCACACTTTCGA GGAGACGCTCGCCCAGCTCCAGCAAAAGAATAtcccgctcctgctcttGT ACGGGAAAGAGGACCCGTGGATTTTCCCCTCTTGGGGCCAACGTGTCAAG CGTCAAGTCTCGCTGGCCACCTACTACGAACTCAGCCCTGCCGGACATTG TCCTCACCACGAGACCCCCGTGGCAGTGAACGCCTTGATACTGGAGTGGT TGCAGAAGCAGaacggaggggcgggtggaggagaagatgggggGATCGGT CGAGGCAGCAAGGCGATGGGaagcggggtggagggaaaggaaagggggga gggcccagGTGGAGACAGAGGAAGCATTAGAACGTATTTTGAGCCAGTCA CTGGGAAGCAAGTCACGGCTACCCTGATGGATGGTCGCCCCCGGGACACG ATTGAGTGGTTGCTGGCAAACACTGTGTTTCGGTGAATGCCTGCCGCACA AACGACACAGCTGATTGTGGCTTTCGTGTTTCTTCAAGTAGTCGACGCCt ttgtccttccccccctacctTCGTGTACGACCTCGACTGCATGTGTCTCT TTTCCCCGAAACTCTTTGTGGAGGAGCGCGATGACAACCAGACGCTTCGT CGCCTTCCAAGACAGTAAACGGACGCATGAGAGCAGTGAAGCTCTAGCTG TCAAGGagaatgaagaggaagaggaactgTTAGAATTAGAAGGCAAATAC TACCAGTGGAAGCACGGGCCCGTACACTACGTGGAGGCAGGCACCGAAGC GGCTACTGCTGATACGGCCGCCATTTTGCTCTTGCCAGGGTTCGGTGTGT CCTCCAGCCACTACGAGCGGAACATCGGTCCTCTGGCTGCATCAGGCTAT CATGTCTTCGCCATAGACTACCTGGGGCAGGGCAAAAGCTGGCCGGACAA GGAccccgagaaggaggaccaGCTGGTCTTGTCGATCGACACGTGGAGCG AGCAAATCATCTCCTTCATCCGCGACGTGATCGGGAGGCCTGTCTACATA TCTGGAAACTCATTAGGGGGATTCCTGGCCACGACTGTGGCGGCCCGGCA CCACGAGTGGATCCGGGGCGTCGTGCTGCTGAACAGCACGCCCTTCTGGT CCTTTGCGCCCAACCGGAAGAAGATGCACCCCTGGGTGAAAGAGGCCATC ATCCCCTACGACGgcgtcctcccagccccgcGACCCCTCTACGAGATCGG CTCCCGCTGGTACAACTCTTTGAGGAACAAAGAGACCGTCAAGGCCATGC TGGGCGCCGTGTATGCGGATGAGAAAGCCTGGGGCGACCGGCTGGTGGAG CAGATTCTGGTCCCGACGGAGCACAAGCACGGCCAGAGCGTCttcacctc catcctcttcgcaCCCAAACCCGAGCACACTTTCGAGGAGACGCTCGCCC AGCTCCAGCAAAAGAATAtcccgctcctgctcttGTACGGGAAAGAGGAC CCGTGGATTTTCCCCTCTTGGGGCCAACGTGTCAAGCGTCAAGTCTCGCT GGCCACCTACTACGAACTCAGCCCTGCCGGACATTGTCCTCACCACGAGA CCCCCGTGGCAGTGAACGCCTTGATACTGGAGTGGTTGCAGAAGCAGaac ggaggggcgggtggaggagaagatgggggGATCGGTCGAGGCAGCAAGGC GATGGGaagcggggtggagggaaaggaaaggggggagggcccagGTGGAG ACAGAGGAAGCATTAGAACGTATTTTGAGCCAGTCACTGGGAAGCAAGTC ACGGCTACCCTGATGGATGGTCGCCCCCGGGACACGATTGAGTGGTTGCT GGCAAACACTGTGTTTCGGTGAATGCCTGCCGCACAAACGACACAGCTGA TTGTGGCTTTCGTGTTTCTTCAAGTAGTCGACGCCtttgtccttcccccc ctacctTCGTGTACGACCTCGACTGCATGTGTCTCTTTTCCCCGAAACTC TTTGTGGAGGAGCGCGATGACAACCAGACGCTTCGTCGCCTTCCAAGACA GTAAACGGACGCATGAGAGCAGTGAAGCTCTAGCTGTCAAGGagaatgaa gaggaagaggaactgTTAGAATTAGAAGGCAAATACTACCAGTGGAAGCA CGGGCCCGTACACTACGTGGAGGCAGGCACCGAAGCGGCTACTGCTGATA CGGCCGCCATTTTGCTCTTGCCAGGGTTCGGTGTGTCCTCCAGCCACTAC GAGCGGAACATCGGTCCTCTGGCTGCATCAGGCTATCATGTCTTCGCCAT AGACTACCTGGGGCAGGGCAAAAGCTGGCCGGACAAGGAccccgagaagg aggaccaGCTGGTCTTGTCGATCGACACGTGGAGCGAGCAAATCATCTCC TTCATCCGCGACGTGATCGGGAGGCCTGTCTACATATCTGGAAACTCATT AGGGGGATTCCTGGCCACGACTGTGGCGGCCCGGCACCACGAGTGGATCC GGGGCGTCGTGCTGCTGAACAGCACGCCCTTCTGGTCCTTTGCGCCCAAC CGGAAGAAGATGCACCCCTGGGTGAAAGAGGCCATCATCCCCTACGACGg cgtcctcccagccccgcGACCCCTCTACGAGATCGGCTCCCGCTGGTACA ACTCTTTGAGGAACAAAGAGACCGTCAAGGCCATGCTGGGCGCCGTGTAT GCGGATGAGAAAGCCTGGGGCGACCGGCTGGTGGAGCAGATTCTGGTCCC GACGGAGCACAAGCACGGCCAGAGCGTCttcacctccatcctcttcgcaC CCAAACCCGAGCACACTTTCGAGGAGACGCTCGCCCAGCTCCAGCAAAAG AATAtcccgctcctgctcttGTACGGGAAAGAGGACCCGTGGATTTTCCC CTCTTGGGGCCAACGTGTCAAGCGTCAAGTCTCGCTGGCCACCTACTACG AACTCAGCCCTGCCGGACATTGTCCTCACCACGAGACCCCCGTGGCAGTG AACGCCTTGATACTGGAGTGGTTGCAGAAGCAGaacggaggggcgggtgg aggagaagatgggggGATCGGTCGAGGCAGCAAGGCGATGGGaagcgggg tggagggaaaggaaaggggggagggcccagGTGGAGACAGAGGAAGCATT AGAACGTATTTTGAGCCAGTCACTGGGAAGCAAGTCACGGCTACCCTGAT GGATGGTCGCCCCCGGGACACGATTGAGTGGTTGCTGGCAAACACTGTGT TTCGGTGA back to top
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