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Properties
| Property Name | Value |
|---|
| Product | ribosomal rna-processing protein 7 |
| Orig transcript id | gnl|cribi|Naga_100008g16.7877.mrna |
| Orig protein id | gnl|cribi|Naga_100008g16.7877 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:884293..885719 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2651 ID=rna2651|Name=rna2651|organism=Nannochloropsis gaditana|type=mRNA|length=2085bp
AGCACCGGCAGGTCTGCCCACAGAGACAAAAAAAGCGGCACACGCACACC
ATGTGGGTTCGACCCTTTTTTTCGCTTGTTTGTGGATTTATCATGTTTCT
CATTGGCTTCTCCTTGGTCTTAAAGTGTCACGAAGCTGGCTTTTTCCGCC
TCTTCTCAACCTCTCCTGCTGGAAAAGGCAAGTTGTCTGACCCATTTTTA
ATCTACATCATTAGACAAGGGGGCAGAAGAGGGAAAGTTGTTTATCAAGA
GTATGCGGGTGACCTGCCCTACGCTGCCGACCATAGCCATGATGGTGTTG
TCGGCCTCGAGGATGACTCAGGGTTTTCTGGTAAAAAGTGGGAGGCTTTC
ATCATCATCGCTCCCTGTGACAAGGAGATTTGCCGTCACGGTCGAGCCTA
AATCGTCGGCTTCTCCAGATCTTTATCAGTGTCAGGCGGGGTTTACCGAG
GATGAGAAAGAAGCTGTATTCTCTTTCGAACGCCGCCTTAAGGACTCCGG
TATTGACGCTGAGGGACTGGAGCATGCCCTCTTTTGGCCACAAGGAGACA
CAGCCCCCTCCCGAGGTTTGAAAACAAACCTCAATATACCTTTGGGCAAA
GTTTTGATAAAACTGCCTCGATCACAAGCAATTTGTTTGGATGAAGGAGA
AAGTACTCCCTTCCCACAATGGGTTCCCCAAAAGCAATGGAAAAAAATGC
CATGGTACGCGCAGCTGGGACTTAAGCTTGTCTATGAACGGAAGACATCC
ACAAGCGCGCTCAAAGCCGGGTATACGCAGCTCCTGCCTCCACCCGAGGG
CATCCCTACCCCGCTCCATTGGCCAGAAGAGGACTTAAATGCGCTTCGAG
GCGTCTATCCCGTCCTGGCGGGGAAAGTAGACCGACAACGACAACTGTGG
GCGGGGCTCTACGACGCGTTGGGGAAAACACGAGCCGTACGGGAAGACAT
GGACGAGACCACCTTCGTGTGGGCCATGGAAAGCGTCCTGTCGCGGGCAT
TCAAAGGCACCTTTGGCACGGGTTTCAACAGTTTGGCGCCCTCCCTCCTC
TTGGTCGCCCTCTTTGCCGGTATCTACTACCTTGACCAGGAGACGATTCA
ACTCCTATCTTACGCCCTCGAGGAATACCCCTACCTAGCGGTAATACCCG
GCGCCCTAGTCTTGCTCCCTTCTCTCTTGGAATTTTTCCGATCCAAAGCA
ACCTATGTACTGGCGCCCATGATCGATTCTCTCAACCATCGCTCCACCGT
CCCGACCGACTTGGACTACGACTCCGTGCGGCAACGCTTTCGTCTGAGTC
TGGGGGAGGACTTCAAGGCGGGGCAGCAGGTGTTCATGTCCTACGGCGAC
AAGAGCAACGATGACCTGCTCTTTCACTACGGCTTCGTGGAGGTCGACGC
GGCGGCCGACGTGTTCGAATTCGGGGATCTCCTGGACTGGCTGCTCGAAA
ACCGGGCGGGAATCGTCAACGACGACCGTGTGCAGACCCTGTTCAGTAAA
GGGCTGCAGGAGAACGTGCGAAGCTGCCGGCTGGGGCGGAGGGGGCGGCT
GGTAGACGAGAAAGCTCTGGAAGGCTTGCGAATCCTCTTGGCATCGGACG
ACGAGTTGCGGGCAGAGAACGCCATCACGGAGAGCATCATCCAGACGCCC
ATGTTTCTGACCTTGGACGAGTTTCAGGACTCTGTTTTCTCCAAGGAACT
GCAGTCGCCGACCGAGCTGGCCGTCTATGAAGCCATGCTGGAGGCCACCT
TGGAGCAACGGCAGCGCTTGTCCTTGACGCAGGAGGAGGAGGAAGAGCTG
GGAAAAGCGGCGGCCTCACGAGAACGACTAGGGGCTGAGACGGAAAATGC
GGAGAGGGCTCCTCGCTTGCTAACATTGGCATTCCGGGTGGAAAAATTGC
GTCTGTTGGATGAGGCGATCGCGCGCTTTCGGAAACTCACCGGTGCCGAG
AAACAGTTGTTGCTTCCTCCCAAAAGTGCGGCGTCGAAAAGTGTGTGAAC
GCATCCATACAGACGAAAGAGCCAGGTTCTCAGTGTAATTCTAACAACAA
ACCTTGGTAACGGATTGTAAGAGCGACATTTCGCC back to topprotein sequence of rna2651 >rna2651-protein ID=rna2651-protein|Name=rna2651|organism=Nannochloropsis gaditana|type=polypeptide|length=344bp
MLLSPTEGLVHMGWGGSTGLTAGLLLYLRFESTASIAAFQELGNMHVKGY
KVITVPLNNNTSSPFSRFVYVRQHNNKGEEELPHGRTLFLANVPAQIGVD
VHMYLKEAFAKFGEVELVRVKESSDNDAMSSYTVKSAIAFVIFRSSKGVK
SVMNAPFGESRLPPPSVKASLAEYKPSKRQRKLHSQYQDTANETERKEAM
AAALEEDVQSLVRRFRAKLPQAKLLQEEVDDYMARFEAAEEEAERKRKEA
ASKPDADGFVTVAYGKKRRRGGDADGSDGMNGGRKRGRAGSQKKKKKERE
LKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG back to topmRNA from alignment at CM002459.1:884293..885719- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2651 ID=rna2651|Name=rna2651|organism=Nannochloropsis gaditana|type=mRNA|length=1427bp|location=Sequence derived from alignment at CM002459.1:884293..885719- (Nannochloropsis gaditana)
ATGTTACTCTCCCCTACTGAAGGACTTGTACATATGTGAACCAGTGAGTC
AACCAACCAGCGAATAAAGTAAATAACTTAAAACTATAATACTTGATCGA
TGGGGAAAAAAAACACAACGCATTTTTTCTCCTCAGTTGTTTTGTAAGAA
TTATGGCTTAAAATTTGGAGGGGGTGGGGAGGTTAGTAACCGTGGGCTGC
AGGAACCGTTGAACGCCGGAACGTGGCTAGGCGCTCTCGTCCTGCCTCAA
CTGAGTGTTGTTATTGGCACTTTTTATTTAGGGACGATCGTCTTACCGCA
CATTATCACTATTAGGGGTACCATCGAGTGTAAGGTTCTACTGGCCTCAC
CGCTGGGCTTCTCCTCTACCTGCGTTTTGAGTCCACAGCCTCCATCGCCG
CATTCCAAGAGTTGGGCAACATGCACGTCAAGGGTTATAAAGTAATAACC
GTACCTCTGAATAATAATACGTCGAGCCCTTTCTCAAGATTTGTTTACGT
TCGTCAACATAACAATAAAGGGTAAGACATAGTTCATGTGTTTTATTCTA
ATGTGGCTATCGAGTGAGTATCTTCTTTCTGACTTCGCCTCCCCACCCAA
ATATTTCTGTCATTTCTTTACTCAGAGAAGAAGAGCTGCCTCATGGACGC
ACGCTCTTTTTGGCCAATGTTCCCGCGCAGATAGGTGTTGATGTTCACAT
GTACCTGAAAGAGGCTTTCGCAAAGTTTGGAGAAGTAGAGCTCGTTCGCG
TGAAGGAGTCATCGGACAACGACGCCATGAGCTCGTATACGGTTAAGAGT
GCGATCGCGTTTGTGATTTTTCGTAGTAGTAAAGGGGTTAAATCTGTGAT
GAATGCGCCATTCGGAGAAAGCCGTCTACCACCACCGTCGGTCAAAGCGT
CACTGGCAGAGTATAAGCCTTCCAAGCGACAACGGAAGCTGCATAGTCAA
TACCAGGATACAGCAAATGAAACCGAGCGAAAGGAGGCGATGGCAGCAGC
CTTGGAAGAGGATGTACAAAGCCTTGTTCGGCGTTTTCGGGCTAAACTTC
CGCAGGCGAAACTGTTGCAAGAGGAAGTCGACGATTATATGGCAAGGTTT
GAGGCAGCGGAGGAGGAAGCTGAACGCAAGCGTAAGGAGGCAGCTTCCAA
GCCGGACGCTGATGGCTTTGTTACAGTGGCATATGGTAAAAAACGTCGAC
GGGGGGGGGATGCTGACGGCAGTGATGGTATGAACGGCGGGAGGAAAAGG
GGGCGGGCAGGAAGTCAGAAGAAGAAGAAGAAGGAGAGGGAATTAAAGAA
CTTCTACGCCCATCAAATGCGGGAGGCAAAACGGGAGCAGCTGGCGCGCC
TCCGGACACGCTTCGAGGAGGATAAGGCACGAATAGAAAAGATGAAAGCT
GCACGTAAGTTCAAGCCGTTTGGATGA back to topCoding sequence (CDS) from alignment at CM002459.1:884293..885719- >rna2651 ID=rna2651|Name=rna2651|organism=Nannochloropsis gaditana|type=CDS|length=4140bp|location=Sequence derived from alignment at CM002459.1:884293..885719- (Nannochloropsis gaditana)
AGAAGAAGAGCTGCCTCATGGACGCACGCTCTTTTTGGCCAATGTTCCCG
CGCAGATAGGTGTTGATGTTCACATGTACCTGAAAGAGGCTTTCGCAAAG
TTTGGAGAAGTAGAGCTCGTTCGCGTGAAGGAGTCATCGGACAACGACGC
CATGAGCTCGTATACGGTTAAGAGTGCGATCGCGTTTGTGATTTTTCGTA
GTAGTAAAGGGGTTAAATCTGTGATGAATGCGCCATTCGGAGAAAGCCGT
CTACCACCACCGTCGGTCAAAGCGTCACTGGCAGAGTATAAGCCTTCCAA
GCGACAACGGAAGCTGCATAGTCAATACCAGGATACAGCAAATGAAACCG
AGCGAAAGGAGGCGATGGCAGCAGCCTTGGAAGAGGATGTACAAAGCCTT
GTTCGGCGTTTTCGGGCTAAACTTCCGCAGGCGAAACTGTTGCAAGAGGA
AGTCGACGATTATATGGCAAGGTTTGAGGCAGCGGAGGAGGAAGCTGAAC
GCAAGCGTAAGGAGGCAGCTTCCAAGCCGGACGCTGATGGCTTTGTTACA
GTGGCATATGGTAAAAAACGTCGACGGGGGGGGGATGCTGACGGCAGTGA
TGGTATGAACGGCGGGAGGAAAAGGGGGCGGGCAGGAAGTCAGAAGAAGA
AGAAGAAGGAGAGGGAATTAAAGAACTTCTACGCCCATCAAATGCGGGAG
GCAAAACGGGAGCAGCTGGCGCGCCTCCGGACACGCTTCGAGGAGGATAA
GGCACGAATAGAAAAGATGAAAGCTGCACGTAAGTTCAAGCCGTTTGGAT
GAGTTCTACTGGCCTCACCGCTGGGCTTCTCCTCTACCTGCGTTTTGAGT
CCACAGCCTCCATCGCCGCATTCCAAGAGTTGGGCAACATGCACGTCAAG
GGTTATAAAGTAATAACCGTACCTCTGAATAATAATACGTCGAGCCCTTT
CTCAAGATTTGTTTACGTTCGTCAACATAACAATAAAGGGGGGTGGGGAG
ATGTTACTCTCCCCTACTGAAGGACTTGTACATATAGAAGAAGAGCTGCC
TCATGGACGCACGCTCTTTTTGGCCAATGTTCCCGCGCAGATAGGTGTTG
ATGTTCACATGTACCTGAAAGAGGCTTTCGCAAAGTTTGGAGAAGTAGAG
CTCGTTCGCGTGAAGGAGTCATCGGACAACGACGCCATGAGCTCGTATAC
GGTTAAGAGTGCGATCGCGTTTGTGATTTTTCGTAGTAGTAAAGGGGTTA
AATCTGTGATGAATGCGCCATTCGGAGAAAGCCGTCTACCACCACCGTCG
GTCAAAGCGTCACTGGCAGAGTATAAGCCTTCCAAGCGACAACGGAAGCT
GCATAGTCAATACCAGGATACAGCAAATGAAACCGAGCGAAAGGAGGCGA
TGGCAGCAGCCTTGGAAGAGGATGTACAAAGCCTTGTTCGGCGTTTTCGG
GCTAAACTTCCGCAGGCGAAACTGTTGCAAGAGGAAGTCGACGATTATAT
GGCAAGGTTTGAGGCAGCGGAGGAGGAAGCTGAACGCAAGCGTAAGGAGG
CAGCTTCCAAGCCGGACGCTGATGGCTTTGTTACAGTGGCATATGGTAAA
AAACGTCGACGGGGGGGGGATGCTGACGGCAGTGATGGTATGAACGGCGG
GAGGAAAAGGGGGCGGGCAGGAAGTCAGAAGAAGAAGAAGAAGGAGAGGG
AATTAAAGAACTTCTACGCCCATCAAATGCGGGAGGCAAAACGGGAGCAG
CTGGCGCGCCTCCGGACACGCTTCGAGGAGGATAAGGCACGAATAGAAAA
GATGAAAGCTGCACGTAAGTTCAAGCCGTTTGGATGAGTTCTACTGGCCT
CACCGCTGGGCTTCTCCTCTACCTGCGTTTTGAGTCCACAGCCTCCATCG
CCGCATTCCAAGAGTTGGGCAACATGCACGTCAAGGGTTATAAAGTAATA
ACCGTACCTCTGAATAATAATACGTCGAGCCCTTTCTCAAGATTTGTTTA
CGTTCGTCAACATAACAATAAAGGGGGGTGGGGAGATGTTACTCTCCCCT
ACTGAAGGACTTGTACATATAGAAGAAGAGCTGCCTCATGGACGCACGCT
CTTTTTGGCCAATGTTCCCGCGCAGATAGGTGTTGATGTTCACATGTACC
TGAAAGAGGCTTTCGCAAAGTTTGGAGAAGTAGAGCTCGTTCGCGTGAAG
GAGTCATCGGACAACGACGCCATGAGCTCGTATACGGTTAAGAGTGCGAT
CGCGTTTGTGATTTTTCGTAGTAGTAAAGGGGTTAAATCTGTGATGAATG
CGCCATTCGGAGAAAGCCGTCTACCACCACCGTCGGTCAAAGCGTCACTG
GCAGAGTATAAGCCTTCCAAGCGACAACGGAAGCTGCATAGTCAATACCA
GGATACAGCAAATGAAACCGAGCGAAAGGAGGCGATGGCAGCAGCCTTGG
AAGAGGATGTACAAAGCCTTGTTCGGCGTTTTCGGGCTAAACTTCCGCAG
GCGAAACTGTTGCAAGAGGAAGTCGACGATTATATGGCAAGGTTTGAGGC
AGCGGAGGAGGAAGCTGAACGCAAGCGTAAGGAGGCAGCTTCCAAGCCGG
ACGCTGATGGCTTTGTTACAGTGGCATATGGTAAAAAACGTCGACGGGGG
GGGGATGCTGACGGCAGTGATGGTATGAACGGCGGGAGGAAAAGGGGGCG
GGCAGGAAGTCAGAAGAAGAAGAAGAAGGAGAGGGAATTAAAGAACTTCT
ACGCCCATCAAATGCGGGAGGCAAAACGGGAGCAGCTGGCGCGCCTCCGG
ACACGCTTCGAGGAGGATAAGGCACGAATAGAAAAGATGAAAGCTGCACG
TAAGTTCAAGCCGTTTGGATGAGTTCTACTGGCCTCACCGCTGGGCTTCT
CCTCTACCTGCGTTTTGAGTCCACAGCCTCCATCGCCGCATTCCAAGAGT
TGGGCAACATGCACGTCAAGGGTTATAAAGTAATAACCGTACCTCTGAAT
AATAATACGTCGAGCCCTTTCTCAAGATTTGTTTACGTTCGTCAACATAA
CAATAAAGGGGGGTGGGGAGATGTTACTCTCCCCTACTGAAGGACTTGTA
CATATAGAAGAAGAGCTGCCTCATGGACGCACGCTCTTTTTGGCCAATGT
TCCCGCGCAGATAGGTGTTGATGTTCACATGTACCTGAAAGAGGCTTTCG
CAAAGTTTGGAGAAGTAGAGCTCGTTCGCGTGAAGGAGTCATCGGACAAC
GACGCCATGAGCTCGTATACGGTTAAGAGTGCGATCGCGTTTGTGATTTT
TCGTAGTAGTAAAGGGGTTAAATCTGTGATGAATGCGCCATTCGGAGAAA
GCCGTCTACCACCACCGTCGGTCAAAGCGTCACTGGCAGAGTATAAGCCT
TCCAAGCGACAACGGAAGCTGCATAGTCAATACCAGGATACAGCAAATGA
AACCGAGCGAAAGGAGGCGATGGCAGCAGCCTTGGAAGAGGATGTACAAA
GCCTTGTTCGGCGTTTTCGGGCTAAACTTCCGCAGGCGAAACTGTTGCAA
GAGGAAGTCGACGATTATATGGCAAGGTTTGAGGCAGCGGAGGAGGAAGC
TGAACGCAAGCGTAAGGAGGCAGCTTCCAAGCCGGACGCTGATGGCTTTG
TTACAGTGGCATATGGTAAAAAACGTCGACGGGGGGGGGATGCTGACGGC
AGTGATGGTATGAACGGCGGGAGGAAAAGGGGGCGGGCAGGAAGTCAGAA
GAAGAAGAAGAAGGAGAGGGAATTAAAGAACTTCTACGCCCATCAAATGC
GGGAGGCAAAACGGGAGCAGCTGGCGCGCCTCCGGACACGCTTCGAGGAG
GATAAGGCACGAATAGAAAAGATGAAAGCTGCACGTAAGTTCAAGCCGTT
TGGATGAGTTCTACTGGCCTCACCGCTGGGCTTCTCCTCTACCTGCGTTT
TGAGTCCACAGCCTCCATCGCCGCATTCCAAGAGTTGGGCAACATGCACG
TCAAGGGTTATAAAGTAATAACCGTACCTCTGAATAATAATACGTCGAGC
CCTTTCTCAAGATTTGTTTACGTTCGTCAACATAACAATAAAGGGGGGTG
GGGAGATGTTACTCTCCCCTACTGAAGGACTTGTACATAT back to top
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