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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g15.7920.mrna |
| Orig protein id | gnl|cribi|Naga_100008g15.7920 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:882175..884259 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2650 ID=rna2650|Name=rna2650|organism=Nannochloropsis gaditana|type=mRNA|length=1691bp
GACCATCACACTTTTTTACCCCCCCACAGGACAACTATGCCACCTTTTCC
GTTTCTGGCCACCACACTTTTCGTCCTTTTCTTTTGCACGTTTGGGCGAC
CTCAGCATGTAGCTATCGTTGGCGCAGGGATGGGCGGTGCTGCGTCTGCT
TATTTTTTGAGAGAGTTGTTGGGGAACAATGCGACGATAACCGTGATCGA
GCAGAGCGCGAGAGTGGGCGGCCGGGCCGAGAACGTGTCCTACATCAACA
CGACCACCACGGTGCCCTTAGAGATTGGGGCCTCAATCCTCTACACCGGC
AACGAGCATTTGATGACGGCGGTGCGCACACTGAAGCTTCACGCCGCCCC
GCCGGTCTTTGAGAGCGAGGCGGGCACATCGGGCATCTGGGACGGCTCTC
GGCTTGTCTTTCAGAGCTCCTCGTGGAGCTTCTTGACGGCAATGCGGGTA
CTGTGGCGATACGGACTAGGAATGTTCAGGCTGCGACGTGTCGTGCGGCA
GACATTGAGGAAATTCAGGCAAATTTATGCCCTTCAAGGTACCGCAGGCA
GCCCCGTCCGCGTCGCATATGAGACGCCGGAAGCTCTATGGGGGGCTCTA
GATCTCCTTCATTTGACCAAGGTAAGCCTGCGAGACTACTTGGCGTCCCA
AGGAGTGGGTCTTCCGGACTCGAAGCTCGTCACCGAATTCGTGGGCTCCA
TCCAGCGCGTGAATTACAACGCAAACAACGACCTGAATGCTCTGGCAGGC
CTGGTCTCCCTGATCCCCATGGTGACGGGGGAGGTAGTAAGCCTCACAGA
AGGCAACGCCGCCCTGGCCGTGTCCATGCTGAAGGCGGCTGAGGCGCGCG
TGCTGCAGGGGGTACGGGTGGGGGAGGTGGAGGTAGTGCGAGGCGGCGCC
GAAAGTGGATATCGGCTTGTCCAAGACGACGGCAGGCTCGTCCGAACAGA
GGGGGACAAGGAGAAGGGCGAAAATGAGGCGTTCGACGTGGTGATCGTCG
CGACGCCCTTCGCCTTCTCGAGCCTGCGTGTGATTGAGCGGGAAAAGGGC
GCCAACGACGAGCGCCAACAGGCCAGCGCCTTGTCCCCCCCACCCGCCGC
CTTCACCACCACCCACGCCAGCTTTGTACAGGGCCGGGTCCGCCCCGGCT
TCTTTGGACCCTCCACGACCCGCGAAGATCGCGTCCCCACCTCCGTATAC
GTGGTGGAGAACTCGAGCGTGCCCATCTCCTCCCTCTCCCTCCATGTCTG
GATCAACGCGACGGAGAGGACCGGCATCTACAAGCTCTTCAGCTCCGCCC
TCCTCACGGACTCATTTCTGGATGACATGTTCTTCACTGGGTGGAGCTTG
CTCCACCACCGTAAATGGAAAGCCTACCCCTCTTACCACCCGCCCGAAGC
CATGACCCCCTTTCTGGTCGTGCCCGGAGAGAGGATCTGTTACGTGAACG
CTCTGGAAACAGCGGTGAGTGCCATGGAAATATCTGCAATTGCGGCCCAA
AACTGTGCGCTTTTACTTTCTCGGGATTTTGAGGACAAAATGGCCAATGT
GGATGAGCAAAGAGAGAAAATGGAAGAGTTGTGATGATGAGCAGTGGGAA
AATGGAAGAAATGTGAAGGCTCGTAGCGGAACAAACAACTGTGAGATTGC
CACGTCAAAACCAGCCGAAAGAAACATGAACGCGGCGAACT back to topprotein sequence of rna2650 >rna2650-protein ID=rna2650-protein|Name=rna2650|organism=Nannochloropsis gaditana|type=polypeptide|length=581bp
MRVTCPTLPTIAMMVLSASRMTQGFLVKSGRLSSSSLPVTRRFAVTVEPK
SSASPDLYQCQAGFTEDEKEAVFSFERRLKDSGIDAEGLEHALFWPQGDT
APSRGLKTNLNIPLGKVLIKLPRSQAICLDEGESTPFPQWVPQKQWKKMP
WYAQLGLKLVYERKTSTSALKAGYTQLLPPPEGIPTPLHWPEEDLNALRG
VYPVLAGKVDRQRQLWAGLYDALGKTRAVREDMDETTFVWAMESVLSRAF
KGTFGTGFNSLAPSLLLVALFAGIYYLDQETIQLLSYALEEYPYLAVIPG
ALVLLPSLLEFFRSKATYVLAPMIDSLNHRSTVPTDLDYDSVRQRFRLSL
GEDFKAGQQVFMSYGDKSNDDLLFHYGFVEVDAAADVFEFGDLLDWLLEN
RAGIVNDDRVQTLFSKGLQENVRSCRLGRRGRLVDEKALEGLRILLASDD
ELRAENAITESIIQTPMFLTLDEFQDSVFSKELQSPTELAVYEAMLEATL
EQRQRLSLTQEEEEELGKAAASRERLGAETENAERAPRLLTLAFRVEKLR
LLDEAIARFRKLTGAEKQLLLPPKSAASKSV back to topmRNA from alignment at CM002459.1:882175..884259+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2650 ID=rna2650|Name=rna2650|organism=Nannochloropsis gaditana|type=mRNA|length=2085bp|location=Sequence derived from alignment at CM002459.1:882175..884259+ (Nannochloropsis gaditana)
AGCACCGGCAGGTCTGCCCACAGAGACAAAAAAAGCGGCACACGCACACC
ATGTGGGTTCGACCCTTTTTTTCGCTTGTTTGTGGATTTATCATGTTTCT
CATTGGCTTCTCCTTGGTCTTAAAGTGTCACGAAGCTGGCTTTTTCCGCC
TCTTCTCAACCTCTCCTGCTGGAAAAGGCAAGTTGTCTGACCCATTTTTA
ATCTACATCATTAGACAAGGgggcagaagagggaaagttGTTTATCAAGA
GTATGCGGGTGACCTGCCCTACGCTGCCGACCATAGCCATGATGGTGTTG
TCGGCCTCGAGGATGACTCAGGGTTTTCTGGTAAAAAGTGGGAGGCTTTC
ATCATCATCGCTCCCTGTGACAAGGAGATTTGCCGTCACGGTCGAGCCTA
AATCGTCGGCTTCTCCAGATCTTTATCAGTGTCAGGCGGGGTTTACCGAG
GATGAGAAAGAAGCTGTATTCTCTTTCGAACGCCGCCTTAAGGACTCCGG
TATTGACGCTGAGGGACTGGAGCATGCCCTCTTTTGGCCACAAGGAGACA
CAGCCCCCTCCCGAGGTTTGAAAACAAACCTCAATATACCTTTGGGCAAA
GTTTTGATAAAACTGCCTCGATCACAAGCAATTTGTTtggatgaaggaga
aagtaCTCCCTTCCCACAATGGGTTCCCCAAAAGcaatggaaaaaaatgc
cATGGTACGCGCAGCTGGGACTTAAGCTTGTCTATGAACGGAAGACATCC
ACAAGCGCGCTCAAAGCCGGGTATACGCagctcctgcctccacccgAGGG
CATCCCTACCCCGCTCCATTGGCCAGAAGAGGACTTAAATGCGCTTCGAG
GCGTCTATCCCGTCCTGGCGGGGAAAGTAGACCGACAACGACAACTGTGG
GCGGGGCTCTACGACGCGTTGGGGAAAACACGAGCCGTACGGGAAGACAT
GGACGAGACCACCTTCGTGTGGGCCATGGAAAGCGTCCTGTCGCGGGCAT
TCAAAGGCACCTTTGGCACGGGTTTCAACAGTTtggcgccctccctcctc
ttggtcGCCCTCTTTGCCGGTATCTACTACCTTGACCAGGAGACGATTCA
ACTCCTATCTTACGCCCTCGAGGAATACCCCTACCTAGCGGTAATACCCG
GCGCCCTAGTCTtgctcccttctctcttggAATTTTTCCGATCCAAAGCA
ACCTATGTACTGGCGCCCATGATCGATTCTCTCAACCATCGCTCCACCGT
CCCGACCGACTTGGACTACGACTCCGTGCGGCAACGCTTTCGTCTGAGTC
TGGGGGAGGACTTCAAGGCGGGGCAGCAGGTGTTCATGTCCTACGGCGAC
AAGAGCAACGATGACCTGCTCTTTCACTACGGCTTCGTGGAGGTCGACGC
GGCGGCCGACGTGTTCGAATTCGGGGATCTCCTGGACTGGCTGCTCGAAA
ACCGGGCGGGAATCGTCAACGACGACCGTGTGCAGACCCTGTTCAGTAAA
GGGCTGCAGGAGAACGTGCGAAGCTGCCggctggggcggagggggcggct
gGTAGACGAGAAAGCTCTGGAAGGCTTGCGAATCCTCTTGGCATCGGACG
ACGAGTTGCGGGCAGAGAACGCCATCACGGAGAGCATCATCCAGACGCCC
ATGTTTCTGACCTTGGACGAGTTTCAGGACTCTGTTTTCTCCAAGGAACT
GCAGTCGCCGACCGAGCTGGCCGTCTATGAAGCCATGCTGGAGGCCACCT
TGGAGCAACGGCAGCGCTTGTCCTtgacgcaggaggaggaggaagagctg
ggaAAAGCGGCGGCCTCACGAGAACGACTAGGGGCTGAGACGGAAAATGC
GGAGAGGGCTCCTCGCTTGCTAACATTGGCATTCCGGGTGGAAAAATTGC
GTCTGTTGGATGAGGCGATCGCGCGCTTTCGGAAACTCACCGGTGCCGAG
AAACAGTTGTTGCTTCCTCCCAAAAGTGCGGCGTCGAAAAGTGTGTGAAC
GCATCCATACAGACGAAAGAGCCAGGTTCTCAGTGTAATTCTAACAACAA
ACCTTGGTAACGGATTGTAAGAGCGACATTTCGCC back to topCoding sequence (CDS) from alignment at CM002459.1:882175..884259+ >rna2650 ID=rna2650|Name=rna2650|organism=Nannochloropsis gaditana|type=CDS|length=1746bp|location=Sequence derived from alignment at CM002459.1:882175..884259+ (Nannochloropsis gaditana)
ATGCGGGTGACCTGCCCTACGCTGCCGACCATAGCCATGATGGTGTTGTC
GGCCTCGAGGATGACTCAGGGTTTTCTGGTAAAAAGTGGGAGGCTTTCAT
CATCATCGCTCCCTGTGACAAGGAGATTTGCCGTCACGGTCGAGCCTAAA
TCGTCGGCTTCTCCAGATCTTTATCAGTGTCAGGCGGGGTTTACCGAGGA
TGAGAAAGAAGCTGTATTCTCTTTCGAACGCCGCCTTAAGGACTCCGGTA
TTGACGCTGAGGGACTGGAGCATGCCCTCTTTTGGCCACAAGGAGACACA
GCCCCCTCCCGAGGTTTGAAAACAAACCTCAATATACCTTTGGGCAAAGT
TTTGATAAAACTGCCTCGATCACAAGCAATTTGTTtggatgaaggagaaa
gtaCTCCCTTCCCACAATGGGTTCCCCAAAAGcaatggaaaaaaatgccA
TGGTACGCGCAGCTGGGACTTAAGCTTGTCTATGAACGGAAGACATCCAC
AAGCGCGCTCAAAGCCGGGTATACGCagctcctgcctccacccgAGGGCA
TCCCTACCCCGCTCCATTGGCCAGAAGAGGACTTAAATGCGCTTCGAGGC
GTCTATCCCGTCCTGGCGGGGAAAGTAGACCGACAACGACAACTGTGGGC
GGGGCTCTACGACGCGTTGGGGAAAACACGAGCCGTACGGGAAGACATGG
ACGAGACCACCTTCGTGTGGGCCATGGAAAGCGTCCTGTCGCGGGCATTC
AAAGGCACCTTTGGCACGGGTTTCAACAGTTtggcgccctccctcctctt
ggtcGCCCTCTTTGCCGGTATCTACTACCTTGACCAGGAGACGATTCAAC
TCCTATCTTACGCCCTCGAGGAATACCCCTACCTAGCGGTAATACCCGGC
GCCCTAGTCTtgctcccttctctcttggAATTTTTCCGATCCAAAGCAAC
CTATGTACTGGCGCCCATGATCGATTCTCTCAACCATCGCTCCACCGTCC
CGACCGACTTGGACTACGACTCCGTGCGGCAACGCTTTCGTCTGAGTCTG
GGGGAGGACTTCAAGGCGGGGCAGCAGGTGTTCATGTCCTACGGCGACAA
GAGCAACGATGACCTGCTCTTTCACTACGGCTTCGTGGAGGTCGACGCGG
CGGCCGACGTGTTCGAATTCGGGGATCTCCTGGACTGGCTGCTCGAAAAC
CGGGCGGGAATCGTCAACGACGACCGTGTGCAGACCCTGTTCAGTAAAGG
GCTGCAGGAGAACGTGCGAAGCTGCCggctggggcggagggggcggctgG
TAGACGAGAAAGCTCTGGAAGGCTTGCGAATCCTCTTGGCATCGGACGAC
GAGTTGCGGGCAGAGAACGCCATCACGGAGAGCATCATCCAGACGCCCAT
GTTTCTGACCTTGGACGAGTTTCAGGACTCTGTTTTCTCCAAGGAACTGC
AGTCGCCGACCGAGCTGGCCGTCTATGAAGCCATGCTGGAGGCCACCTTG
GAGCAACGGCAGCGCTTGTCCTtgacgcaggaggaggaggaagagctggg
aAAAGCGGCGGCCTCACGAGAACGACTAGGGGCTGAGACGGAAAATGCGG
AGAGGGCTCCTCGCTTGCTAACATTGGCATTCCGGGTGGAAAAATTGCGT
CTGTTGGATGAGGCGATCGCGCGCTTTCGGAAACTCACCGGTGCCGAGAA
ACAGTTGTTGCTTCCTCCCAAAAGTGCGGCGTCGAAAAGTGTGTGA back to top
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