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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g3.7925.mrna |
| Orig protein id | gnl|cribi|Naga_100008g3.7925 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:863859..864957 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2640 ID=rna2640|Name=rna2640|organism=Nannochloropsis gaditana|type=mRNA|length=2308bp
CAAGCCATCTTTTTATACATTCAATTTGGCTGATTCTGTCTGATTCGCAA
CCATGTCACGATTCTGACGGGAAGAGATGGACGGCGGGCCATATGTGTTG
GATTATCATGCGACTTCCGGCCTTTGCAGGCCTTTCCTAGTCTACTTGTC
TCTCGCGTTTGGCAAGGCGATGATGATCTTCGTTTAATGCCGGTACACAC
CCTCATTACACCACTCCTCGGCAACAGGCATCCCTCTGAACATGACTTGG
CTGGGCAAGAGTCGCCGGGTCGTTCACTTGTGCCTCTTCCCCAATGGATT
GCGCGCCGGTACTGGGAAGTCGAGAAGCTCTTTGGGTCGGCTCCTGGAGC
ACGGACCGCTTCCGGCCTCACCAGTATTCCCGCACGGTAGAAGAAGCATT
AGCTGCGGCAAAAGAAGCAACAGGATTTCAACGTTCCCTCAGGTATCGAG
ACTAGCCTGTTTCCAACCAGGAGCAGCCCCGCTGTCCTCTCCGCAGCGTT
TGTTCAGCTCCTTGCCGCCGCACCAAGTGGTAGGCCTCCCCGCACTCTCT
CCCACCATGGAACACGGAACCATCGCCTCATGGACGAAGAAGGAAGGAGA
CAGTTTCGGCCCTGGTGATGTGATATGTGAGATAGAGACGGACAAGGCCG
TGGTCTCCTTTGATGCTCAGGATGAGGGCATTCTTGCCAAGATTCTTGTC
CAGCCAAGTGCCGGAGAAGTCCGTGTCGGGCAACCTATCATGGTCACAGT
CGAGGACGCCGCCAATGTGGCCGCCTTTGCCAATTTTTCCCCCGACGCGG
CAGAACCGGCGCCCCCCAAGGCAGCCGCCCCTTCCCCCGCCGCCTCCACG
CCTGCCCCTTCGACGCCGTCTCCGCCGCCCTCCCCCCCTTCCTCCCCTCC
GACCTCGGCCGCCGCCGGCGTCTCCCTGCTGGGTTATCCTGGCCGCGTAT
TCGCCAGTCCGCTGGCCAAGACCCTCGCGGGACAGCTCGGTCACGACCTA
CGTGCGATCCCTGGCACGGGACCCAACGGGCGGGTTTTGGCAGCGGACGT
GCGCGAATACGTCCCGCCCGTCGTCGCGGAGAGGCCCACTGAAACGATTC
CGGCCGAAGCAGTTCGGGCCAGCGCGCCTGCACACGCCTCCACCGTGGAG
AAGGTGGCCGGTGCCCCCATACACGGCGCGGGGTTCACGGACTACCGGGT
GTCGGAGGCGGGGCGGGGAGTGGCGGCGCGCCTGACGGTGGCCAAGCAGA
CCGTCCCACATTACTACCTGACTGTGGACCTGGAGCTGGACAAGCTCCTG
TCCTTGCGAGAGACGCTGAACAAGGAGCTGGGCGAGAAGGAGATGGGCCT
GTCCGTGAACGACTTTCTCTTGAAGGCGGCGGCCTTGGCGAGCAAGAAAG
TCCCGGAGGCCAACGCGTCCTGGCACGGCGACTTCGTCAGGCAATACCAC
GCCGTAGACGTGAACTTGGTTCTGGGTGTCGGAGATGGGCTGCTCGCTCC
CGTCATCCGCAATGTGGACAGCAAGGGCTTGCGGGCCTTGTCAGCCGAAG
TGGCTGGGCTTGTAGGCGGCGCAGAGAGGGGCGAGCTGTCAGAGGAGGCG
CTCCAGACTGGCACCTTTACCTTGATCAATGTGGGTATGTACGGTGTGAA
GGCCGTCGCGCCGATCGTCAGCTTGCCCCAGGCCTGTGTCTTGGGCGTGG
GGGCAATCGAAAACCGGGTGGTGCCAGCCGCCGCGCCTCTGAAGGGGGAA
GCAGCGGGGGAGGGGGAGGGAGAGGTCTACCGTGTCGTGCCCGGGGTCAC
AGTGACGTTGAGCTGTGACCACCGGGTGATTGATGGTGCTGTAGGTGCGC
AGTGGCTGAGTGCCTTCAAAAGCCTGGTGGAGGAGCCCATGACTCTTTTG
TTGTAGCACAGGGAAGGCGTTGTAGGCTTCGGGAAAGGTAAAAAGGCATT
TGAGGTGTGAGGACGCGGATCAAGTTTTGTTCAGGGACATAGGGACGGTA
TACACCCGTCGAAGCAATTGGAAAGGACCACGTTGACGTCGCACAAAAAG
AAAATTCTGGAACAGGGTCAAAGCTATGTGCGACAATGTTTGCGCGGGGC
TTGCTTGATCTGTCAACACGCGTCTGGGATTTGGCTGGAAGCCTCACGTG
GATGGTGTGTGCTGTGAACTTGTTCTTCATCTTTACCTCTCCGGGAGAGT
TAATGGATTCTTCCTTCTCAGTCGCCTGGAGGCCGTGGGTCATATGCACA
TATCACAGAGCGGGAAATATTTCAGCTTGCACGTTTCTACCCACAAGCAG
CACAATTC back to topprotein sequence of rna2640 >rna2640-protein ID=rna2640-protein|Name=rna2640|organism=Nannochloropsis gaditana|type=polypeptide|length=222bp
MDSRVSLSADNSTATTTTATTSTTLSTVSGSADTNAAQRRRPTYFFRTAD
SLPDDGFSPRLEGRSYLSEGFQMLLWSVVLNGLLALVVLWLVEGLLQPVL
IAILELTPSPRTSKVLTALLTVVLLQGGGQGSIILLMALGISAVVVGMSQ
SDGVFVPCFLVLLVCLGAVLREGGWNAYKNGSVASRNTWGDASPLSAASG
VLKAFSGMGGAPEGGRRNLWGA back to topmRNA from alignment at CM002459.1:863859..864957- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2640 ID=rna2640|Name=rna2640|organism=Nannochloropsis gaditana|type=mRNA|length=1099bp|location=Sequence derived from alignment at CM002459.1:863859..864957- (Nannochloropsis gaditana)
GGAAGCTTAGAATTGTGTTCCTGATTGCTGATCCTTTTTTTTCGGAACCT
TTTCCCCCTAGACTCGTATACTCCTACCAGGCTCGATTCCACCAAGTCAC
ATGGACTCCAGAGTGAGTCTCTCCGCAGACAACAGCACTGCAACAACAAC
AACTGCCACCACAAGCACTACTCTCTCTACCGTCAGCGGATCGGCCGACA
CTAATGCTGCGCAACGTCGTCGTCCAACATATTTCTTTCGCACTGCAGAC
TCGCTACCGGATGACGGATTTAGTCCCCGTTTAGAGGGTCGCTCGTATTT
AAGTGAGGGGTTCCAAATGCTCCTGTGGTCCGTGGTACTTAACGGCTTGC
TGGCACTAGTGGTACTGTGGCTGGTTGAGGGTTTGCTGCAACCGGTCCTG
ATAGCGATCCTTGAACTAACGCCCTCCCCGCGCACAAGCAAAGTCTTGAC
CGCACTTCTTACTGTCGTCTTACTTCAAGGCGGGGGGCAAGGATCGATAA
TATTACTGATGGCCTTGGGAATCTCAGCAGTGGTGGTGGGCATGTCTCAG
TCCGACGGCGTCTTTGTACCTTGCTTTCTCGTCTTGCTCGTGTGTCTGGG
GGCGGTTTTGCGGGAAGGCGGATGGAATGCGTATAAGAACGGGTCGGTTG
CCTCACGTAACACGTGGGGAGATGCATCTCCACTAAGTGCTGCTTCAGGT
GTTCTTAAGGCTTTCTCGGGAATGGGAGGTGCGCCAGAAGGGGGCCGGAG
GAATTTATGGGGAGCCTAGTGTGGCAGAGGTGCGAAGCAAGAGGAATTCG
AAGTTCGATCTGAGTACCGCAGGGTGTCAACAAACAGACTGAACATATAA
GCACGTAACATGCGAACTCGAGGTGAGACGCGTCGTGGAATTGTGCTGCT
TGTGGGTAGAAACGTGCAAGCTGAAATATTTCCCGCTCTGTGATATGTGC
ATATGACCCACGGCCTCCAGGCGACTGAGAAGGAAGAATCCATTAACTCT
CCCGGAGAGGTAAAGATGAAGAACAAGTTCACAGCACACACCATCCACGT
GAGGCTTCCAGCCAAATCCCAGACGCGTGTTGACAGATCAAGCAAGCCC back to topCoding sequence (CDS) from alignment at CM002459.1:863859..864957- >rna2640 ID=rna2640|Name=rna2640|organism=Nannochloropsis gaditana|type=CDS|length=669bp|location=Sequence derived from alignment at CM002459.1:863859..864957- (Nannochloropsis gaditana)
ATGGACTCCAGAGTGAGTCTCTCCGCAGACAACAGCACTGCAACAACAAC
AACTGCCACCACAAGCACTACTCTCTCTACCGTCAGCGGATCGGCCGACA
CTAATGCTGCGCAACGTCGTCGTCCAACATATTTCTTTCGCACTGCAGAC
TCGCTACCGGATGACGGATTTAGTCCCCGTTTAGAGGGTCGCTCGTATTT
AAGTGAGGGGTTCCAAATGCTCCTGTGGTCCGTGGTACTTAACGGCTTGC
TGGCACTAGTGGTACTGTGGCTGGTTGAGGGTTTGCTGCAACCGGTCCTG
ATAGCGATCCTTGAACTAACGCCCTCCCCGCGCACAAGCAAAGTCTTGAC
CGCACTTCTTACTGTCGTCTTACTTCAAGGCGGGGGGCAAGGATCGATAA
TATTACTGATGGCCTTGGGAATCTCAGCAGTGGTGGTGGGCATGTCTCAG
TCCGACGGCGTCTTTGTACCTTGCTTTCTCGTCTTGCTCGTGTGTCTGGG
GGCGGTTTTGCGGGAAGGCGGATGGAATGCGTATAAGAACGGGTCGGTTG
CCTCACGTAACACGTGGGGAGATGCATCTCCACTAAGTGCTGCTTCAGGT
GTTCTTAAGGCTTTCTCGGGAATGGGAGGTGCGCCAGAAGGGGGCCGGAG
GAATTTATGGGGAGCCTAG back to top
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